HO067555
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO067555 vs. TrEMBL
Match: B9GFQ2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_797766 PE=4 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.077e-27 Identity = 78/168 (46.43%), Postives = 96/168 (57.14%), Query Frame = 3 Query: 135 DWKGLLGREAEAQLPQSFVVDSMHLEEKVQSKVNRGSRSLSPAPPVQRKRGCDVEQQKTK-RDSVSQGTIDAPRRLLQFAMRDAVATSRPSNLGTPVEPSLKRLRXXXXXXXXXXXXXEHPPRMQTNSRVVNPMAPMXXXXXXXXXXXXXXKSSASVFNRLGCDMHQS 635 +WKG+ + +S VVD++HLEEK K +R RS SP PP ++KR EQQ K RD+VSQ T APRRLLQFA+RDAV T RPS G+ EPS KRLR + P R+Q+ +RV NPMA + KSS SVF+RLG DM S Sbjct: 137 EWKGVARDVNQPPPLRSSVVDNIHLEEKTHGKASRARRSPSPQPPQEQKRSRHDEQQHVKQRDAVSQATSGAPRRLLQFAVRDAVRTLRPS--GSVKEPSRKRLRSVVSASTEDTSLVDRPRRLQSIARVPNPMATVLKAVREAAEDVVKVKSSGSVFDRLGRDMDAS 302
BLAST of HO067555 vs. TrEMBL
Match: B9HNM5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_767913 PE=4 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.144e-26 Identity = 77/168 (45.83%), Postives = 97/168 (57.74%), Query Frame = 3 Query: 135 DWKGLLGREAEAQLP-QSFVVDSMHLEEKVQSKVNRGSRSLSPAPPVQRKRGCDVEQQKTKRDSVSQGTIDAPRRLLQFAMRDAVATSRPSNLGTPVEPSLKRLRXXXXXXXXXXXXXEHPPRMQTNSRVVNPMAPMXXXXXXXXXXXXXXKSSASVFNRLGCDMHQS 635 +WKG++ R+ + P +S VV ++H EEK +V+ RS SP PP Q+KR E+Q KRD+VSQ T APRRLLQFA+RDAV T RPS G EP LKRLR + P R+Q+ +RV NPMA + KSS SVF+RLG DM S Sbjct: 178 EWKGVV-RDVNHRPPLRSSVVVNIHQEEKTHCEVSHARRSTSPQPPQQKKRSQHDERQHVKRDTVSQATSRAPRRLLQFAVRDAVRTLRPS--GMVKEPLLKRLRSVVSTSTEDTSLVDRPRRLQSIARVPNPMATVLKAVQEAAEDVVKVKSSGSVFDRLGRDMDAS 342
BLAST of HO067555 vs. TrEMBL
Match: D7T2Y5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_64.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032066001 PE=4 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.401e-23 Identity = 70/161 (43.48%), Postives = 89/161 (55.28%), Query Frame = 3 Query: 135 DWKGLLGREAEAQLPQSFVVDSMHLEEKVQSKVNRGSRSLSPAPPVQRKRGCDVEQQKTKRDSVSQGTIDAPRRLLQFAMRDAVATSRPSNLGTPVEPSLKRLRXXXXXXXXXXXXXEHPPRMQTNSRVVNPMAPMXXXXXXXXXXXXXXKSSASVFNRLG 617 +WKGL AE +S D + EEK KV RSLSP P Q+KR + ++ KR+ VSQ TI+APRRLLQFA+RDAVATSRPSNL EP LKRLR + P R+Q+ +R+ + MA +SS +VF+RLG Sbjct: 134 EWKGLARDGAEPPPLRSSEDDHVQTEEKTHRKVGHAKRSLSPKHPNQKKRNRPDDLKQAKREVVSQATINAPRRLLQFAVRDAVATSRPSNLA--AEPKLKRLRSVVSTSTGDSSLDDRPQRLQSVARMPSAMATAIKAVAEAAEDVIKVRSSGNVFDRLG 292
BLAST of HO067555 vs. TrEMBL
Match: B9RHF9_RICCO (Poly-A binding protein, putative OS=Ricinus communis GN=RCOM_1525260 PE=4 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.102e-15 Identity = 51/114 (44.74%), Postives = 67/114 (58.77%), Query Frame = 3 Query: 312 KRDSVSQGTIDAPRRLLQFAMRDAVATSRPSNLGTPVEPSLKRLRXXXXXXXXXXXXXEHPPRMQTNSRVVNPMAPMXXXXXXXXXXXXXXKSSASVFNRLGCDMHQSDGIMQL 653 +R +VSQ TI+APRRLLQFA+RDAV T RPS+L EPS+KRLR + P R+Q+ +RV NPMA + KSS +VF+RLG +M +D I + Sbjct: 20 QRGAVSQATINAPRRLLQFAVRDAVGTLRPSSL--VKEPSMKRLRSVVSISTAESSLVDRPRRIQSIARVPNPMATVIKAVQEAAEDVVKVKSSRNVFDRLGREMDTTDQIRDI 131
BLAST of HO067555 vs. TrEMBL
Match: Q9LTX1_ARATH (Similarity to poly(A)-binding protein OS=Arabidopsis thaliana GN=At3g12640 PE=4 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.105e-11 Identity = 51/141 (36.17%), Postives = 69/141 (48.94%), Query Frame = 3 Query: 192 VDSMHLEEKVQSKVNRGSRSLSPAPPVQRKRGCDVEQQKTKRDSVSQGTIDAPRRLLQFAMRDAVATSRPSNLGTPVEPSLKRLRXXXXXXXXXXXXXEHPPRMQTNSRVVNPMAPMXXXXXXXXXXXXXXKSSASVFNRL 614 V +H EK K RS SP QRKR + + +R++ D RRLLQFA+RDA+A SRP+N T E SLKRLR + ++++ +RVVNPMA + KS SVF+R+ Sbjct: 156 VHKIHNYEKKDHKHRHNKRSPSPQAQSQRKRSRTDDSRNEQREAKP----DVSRRLLQFAVRDALAISRPANSST--ESSLKRLRSVVSTSTQNSSDPDPARKIRSVARVVNPMATVMKAVAEAAEDAKKPKSGRSVFDRI 290
BLAST of HO067555 vs. TrEMBL
Match: Q9C7B4_ARATH (Putative uncharacterized protein T2E22.5 OS=Arabidopsis thaliana GN=T2E22.5 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.360e-10 Identity = 52/149 (34.90%), Postives = 70/149 (46.98%), Query Frame = 3 Query: 192 VDSMHLEEKVQSKVNRGSRSLSPAPPVQRKRGCDVEQQKTKRDSV--------SQGTIDAPRRLLQFAMRDAVATSRPSNLGTPVEPSLKRLRXXXXXXXXXXXXXEHPPRMQTNSRVVNPMAPMXXXXXXXXXXXXXXKSSASVFNRL 614 V +H EK K RS SP QRKR + + +R S+ + D RRLLQFA+RDA+A SRP+N T E SLKRLR + ++++ +RVVNPMA + KS SVF+R+ Sbjct: 156 VHKIHNYEKKDHKHRHNKRSPSPQAQSQRKRSRTDDSRNEQRASLRSALYETNKEAKPDVSRRLLQFAVRDALAISRPANSST--ESSLKRLRSVVSTSTQNSSDPDPARKIRSVARVVNPMATVMKAVAEAAEDAKKPKSGRSVFDRI 302
BLAST of HO067555 vs. TrEMBL
Match: D7L0I8_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_672083 PE=4 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 1.151e-9 Identity = 49/141 (34.75%), Postives = 67/141 (47.52%), Query Frame = 3 Query: 192 VDSMHLEEKVQSKVNRGSRSLSPAPPVQRKRGCDVEQQKTKRDSVSQGTIDAPRRLLQFAMRDAVATSRPSNLGTPVEPSLKRLRXXXXXXXXXXXXXEHPPRMQTNSRVVNPMAPMXXXXXXXXXXXXXXKSSASVFNRL 614 V +H EK K RS SP RKR + + +R++ D RRLLQFA+RDA+A SRP N T E SLKRLR + ++++ +RVVNPMA + +S SVF+R+ Sbjct: 157 VHKIHNYEKKDHKHRHNKRSPSPQSQSHRKRSRTDDSRNEQREAKP----DVSRRLLQFAVRDALAISRPVNSST--ESSLKRLRSVVSTSTQDSSDPDPARKIRSVARVVNPMATVMKAVAEAAEDAKKPRSGRSVFDRI 291
BLAST of HO067555 vs. TrEMBL
Match: Q7XR25_ORYSJ (OSJNBb0022F23.5 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0022F23.5 PE=4 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 1.964e-9 Identity = 56/162 (34.57%), Postives = 75/162 (46.30%), Query Frame = 3 Query: 135 DWKGLLGREAEAQLPQSFVVDSMHLEEKVQSKVNRGSRSLSPAPPVQRKRGCDVEQQKTKRDSVSQGTIDAPRRLLQFAMRDAVATSRPSNLGTP-VEPSLKRLRXXXXXXXXXXXXXEHPPRMQTNSRVVNPMAPMXXXXXXXXXXXXXXKSSASVFNRLG 617 +W G++ ++E +S V +H EEK +K + R+ SP QRKR + ++++ KR S IDAPRRLLQFA+RDAV RP TP E + KRLR R ++ RV A K S SVF RLG Sbjct: 141 EWGGIVRDQSETVPLRSVVTTVLHAEEKDVNKSHARRRTHSPDMHHQRKRSREDDERQIKR--TSHQDIDAPRRLLQFAVRDAV---RPVQPITPRSESASKRLRSVVSTMPSDSPLDVRLQRTNSDVRVPGVTAAALRAAAEAAEDVLKEKYSGSVFRRLG 297
BLAST of HO067555 vs. TrEMBL
Match: Q01IL0_ORYSA (B0806H07.2 protein OS=Oryza sativa GN=H0305E08.1 PE=4 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 1.964e-9 Identity = 56/162 (34.57%), Postives = 75/162 (46.30%), Query Frame = 3 Query: 135 DWKGLLGREAEAQLPQSFVVDSMHLEEKVQSKVNRGSRSLSPAPPVQRKRGCDVEQQKTKRDSVSQGTIDAPRRLLQFAMRDAVATSRPSNLGTP-VEPSLKRLRXXXXXXXXXXXXXEHPPRMQTNSRVVNPMAPMXXXXXXXXXXXXXXKSSASVFNRLG 617 +W G++ ++E +S V +H EEK +K + R+ SP QRKR + ++++ KR S IDAPRRLLQFA+RDAV RP TP E + KRLR R ++ RV A K S SVF RLG Sbjct: 141 EWGGIVRDQSETVPLRSVVTTVLHAEEKDVNKSHARRRTHSPDMHHQRKRSREDDERQIKR--TSHQDIDAPRRLLQFAVRDAV---RPVQPITPRSESASKRLRSVVSTMPSDSPLDVRLQRTNSDVRVPGVTAAALRAAAEAAEDVLKEKYSGSVFRRLG 297
BLAST of HO067555 vs. TrEMBL
Match: Q6ZK85_ORYSJ (Os08g0504600 protein OS=Oryza sativa subsp. japonica GN=OJ1134_H03.9-1 PE=4 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 2.836e-8 Identity = 45/105 (42.86%), Postives = 57/105 (54.29%), Query Frame = 3 Query: 135 DWKGLLGREAEAQLP-QSFVVDSMHLEEKVQSKVNRGSRSLSPAPPVQRKRGCDVEQQKTKRDSVSQGTIDAPRRLLQFAMRDAVATSRPSNLGTPVEPSLKRLR 446 DWKG+ GRE P +S + D +H EEK KVN S RKR D E Q+ KRD + + A RLL+FA+RDAV + ++ T EPS KRLR Sbjct: 151 DWKGI-GREGNENFPLRSVLKDILHGEEKRSQKVNEIRHPPSSNQRNGRKRDRDDEPQQIKRDLPLRRDVGASCRLLKFAVRDAVKAVQQTSSST--EPSSKRLR 252
BLAST of HO067555 vs. TAIR peptide
Match: AT3G12640.1 (| Symbols: | RNA binding (RRM/RBD/RNP motifs) family protein | chr3:4014455-4017675 FORWARD LENGTH=638) HSP 1 Score: 61.6178 bits (148), Expect = 4.372e-10 Identity = 44/121 (36.36%), Postives = 61/121 (50.41%), Query Frame = 3 Query: 252 LSPAPPVQRKRGCDVEQQKTKRDSVSQGTIDAPRRLLQFAMRDAVATSRPSNLGTPVEPSLKRLRXXXXXXXXXXXXXEHPPRMQTNSRVVNPMAPMXXXXXXXXXXXXXXKSSASVFNRL 614 LS QRKR + + +R++ D RRLLQFA+RDA+A SRP+N T E SLKRLR + ++++ +RVVNPMA + KS SVF+R+ Sbjct: 152 LSSEAQSQRKRSRTDDSRNEQREAKP----DVSRRLLQFAVRDALAISRPANSST--ESSLKRLRSVVSTSTQNSSDPDPARKIRSVARVVNPMATVMKAVAEAAEDAKKPKSGRSVFDRI 266 The following BLAST results are available for this feature:
BLAST of HO067555 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of HO067555 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO067555 ID=HO067555; Name=HO067555; organism=Cicer arietinum; type=EST; length=673bpback to top |