HO067555

EST Overview
NameHO067555
Unique NameHO067555
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length673
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO067555 vs. TrEMBL
Match: B9GFQ2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_797766 PE=4 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.077e-27
Identity = 78/168 (46.43%), Postives = 96/168 (57.14%), Query Frame = 3
Query:  135 DWKGLLGREAEAQLPQSFVVDSMHLEEKVQSKVNRGSRSLSPAPPVQRKRGCDVEQQKTK-RDSVSQGTIDAPRRLLQFAMRDAVATSRPSNLGTPVEPSLKRLRXXXXXXXXXXXXXEHPPRMQTNSRVVNPMAPMXXXXXXXXXXXXXXKSSASVFNRLGCDMHQS 635
            +WKG+     +    +S VVD++HLEEK   K +R  RS SP PP ++KR    EQQ  K RD+VSQ T  APRRLLQFA+RDAV T RPS  G+  EPS KRLR             + P R+Q+ +RV NPMA +              KSS SVF+RLG DM  S
Sbjct:  137 EWKGVARDVNQPPPLRSSVVDNIHLEEKTHGKASRARRSPSPQPPQEQKRSRHDEQQHVKQRDAVSQATSGAPRRLLQFAVRDAVRTLRPS--GSVKEPSRKRLRSVVSASTEDTSLVDRPRRLQSIARVPNPMATVLKAVREAAEDVVKVKSSGSVFDRLGRDMDAS 302          
BLAST of HO067555 vs. TrEMBL
Match: B9HNM5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_767913 PE=4 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.144e-26
Identity = 77/168 (45.83%), Postives = 97/168 (57.74%), Query Frame = 3
Query:  135 DWKGLLGREAEAQLP-QSFVVDSMHLEEKVQSKVNRGSRSLSPAPPVQRKRGCDVEQQKTKRDSVSQGTIDAPRRLLQFAMRDAVATSRPSNLGTPVEPSLKRLRXXXXXXXXXXXXXEHPPRMQTNSRVVNPMAPMXXXXXXXXXXXXXXKSSASVFNRLGCDMHQS 635
            +WKG++ R+   + P +S VV ++H EEK   +V+   RS SP PP Q+KR    E+Q  KRD+VSQ T  APRRLLQFA+RDAV T RPS  G   EP LKRLR             + P R+Q+ +RV NPMA +              KSS SVF+RLG DM  S
Sbjct:  178 EWKGVV-RDVNHRPPLRSSVVVNIHQEEKTHCEVSHARRSTSPQPPQQKKRSQHDERQHVKRDTVSQATSRAPRRLLQFAVRDAVRTLRPS--GMVKEPLLKRLRSVVSTSTEDTSLVDRPRRLQSIARVPNPMATVLKAVQEAAEDVVKVKSSGSVFDRLGRDMDAS 342          
BLAST of HO067555 vs. TrEMBL
Match: D7T2Y5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_64.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032066001 PE=4 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.401e-23
Identity = 70/161 (43.48%), Postives = 89/161 (55.28%), Query Frame = 3
Query:  135 DWKGLLGREAEAQLPQSFVVDSMHLEEKVQSKVNRGSRSLSPAPPVQRKRGCDVEQQKTKRDSVSQGTIDAPRRLLQFAMRDAVATSRPSNLGTPVEPSLKRLRXXXXXXXXXXXXXEHPPRMQTNSRVVNPMAPMXXXXXXXXXXXXXXKSSASVFNRLG 617
            +WKGL    AE    +S   D +  EEK   KV    RSLSP  P Q+KR    + ++ KR+ VSQ TI+APRRLLQFA+RDAVATSRPSNL    EP LKRLR             + P R+Q+ +R+ + MA                +SS +VF+RLG
Sbjct:  134 EWKGLARDGAEPPPLRSSEDDHVQTEEKTHRKVGHAKRSLSPKHPNQKKRNRPDDLKQAKREVVSQATINAPRRLLQFAVRDAVATSRPSNLA--AEPKLKRLRSVVSTSTGDSSLDDRPQRLQSVARMPSAMATAIKAVAEAAEDVIKVRSSGNVFDRLG 292          
BLAST of HO067555 vs. TrEMBL
Match: B9RHF9_RICCO (Poly-A binding protein, putative OS=Ricinus communis GN=RCOM_1525260 PE=4 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.102e-15
Identity = 51/114 (44.74%), Postives = 67/114 (58.77%), Query Frame = 3
Query:  312 KRDSVSQGTIDAPRRLLQFAMRDAVATSRPSNLGTPVEPSLKRLRXXXXXXXXXXXXXEHPPRMQTNSRVVNPMAPMXXXXXXXXXXXXXXKSSASVFNRLGCDMHQSDGIMQL 653
            +R +VSQ TI+APRRLLQFA+RDAV T RPS+L    EPS+KRLR             + P R+Q+ +RV NPMA +              KSS +VF+RLG +M  +D I  +
Sbjct:   20 QRGAVSQATINAPRRLLQFAVRDAVGTLRPSSL--VKEPSMKRLRSVVSISTAESSLVDRPRRIQSIARVPNPMATVIKAVQEAAEDVVKVKSSRNVFDRLGREMDTTDQIRDI 131          
BLAST of HO067555 vs. TrEMBL
Match: Q9LTX1_ARATH (Similarity to poly(A)-binding protein OS=Arabidopsis thaliana GN=At3g12640 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.105e-11
Identity = 51/141 (36.17%), Postives = 69/141 (48.94%), Query Frame = 3
Query:  192 VDSMHLEEKVQSKVNRGSRSLSPAPPVQRKRGCDVEQQKTKRDSVSQGTIDAPRRLLQFAMRDAVATSRPSNLGTPVEPSLKRLRXXXXXXXXXXXXXEHPPRMQTNSRVVNPMAPMXXXXXXXXXXXXXXKSSASVFNRL 614
            V  +H  EK   K     RS SP    QRKR    + +  +R++      D  RRLLQFA+RDA+A SRP+N  T  E SLKRLR             +   ++++ +RVVNPMA +              KS  SVF+R+
Sbjct:  156 VHKIHNYEKKDHKHRHNKRSPSPQAQSQRKRSRTDDSRNEQREAKP----DVSRRLLQFAVRDALAISRPANSST--ESSLKRLRSVVSTSTQNSSDPDPARKIRSVARVVNPMATVMKAVAEAAEDAKKPKSGRSVFDRI 290          
BLAST of HO067555 vs. TrEMBL
Match: Q9C7B4_ARATH (Putative uncharacterized protein T2E22.5 OS=Arabidopsis thaliana GN=T2E22.5 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.360e-10
Identity = 52/149 (34.90%), Postives = 70/149 (46.98%), Query Frame = 3
Query:  192 VDSMHLEEKVQSKVNRGSRSLSPAPPVQRKRGCDVEQQKTKRDSV--------SQGTIDAPRRLLQFAMRDAVATSRPSNLGTPVEPSLKRLRXXXXXXXXXXXXXEHPPRMQTNSRVVNPMAPMXXXXXXXXXXXXXXKSSASVFNRL 614
            V  +H  EK   K     RS SP    QRKR    + +  +R S+         +   D  RRLLQFA+RDA+A SRP+N  T  E SLKRLR             +   ++++ +RVVNPMA +              KS  SVF+R+
Sbjct:  156 VHKIHNYEKKDHKHRHNKRSPSPQAQSQRKRSRTDDSRNEQRASLRSALYETNKEAKPDVSRRLLQFAVRDALAISRPANSST--ESSLKRLRSVVSTSTQNSSDPDPARKIRSVARVVNPMATVMKAVAEAAEDAKKPKSGRSVFDRI 302          
BLAST of HO067555 vs. TrEMBL
Match: D7L0I8_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_672083 PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.151e-9
Identity = 49/141 (34.75%), Postives = 67/141 (47.52%), Query Frame = 3
Query:  192 VDSMHLEEKVQSKVNRGSRSLSPAPPVQRKRGCDVEQQKTKRDSVSQGTIDAPRRLLQFAMRDAVATSRPSNLGTPVEPSLKRLRXXXXXXXXXXXXXEHPPRMQTNSRVVNPMAPMXXXXXXXXXXXXXXKSSASVFNRL 614
            V  +H  EK   K     RS SP     RKR    + +  +R++      D  RRLLQFA+RDA+A SRP N  T  E SLKRLR             +   ++++ +RVVNPMA +              +S  SVF+R+
Sbjct:  157 VHKIHNYEKKDHKHRHNKRSPSPQSQSHRKRSRTDDSRNEQREAKP----DVSRRLLQFAVRDALAISRPVNSST--ESSLKRLRSVVSTSTQDSSDPDPARKIRSVARVVNPMATVMKAVAEAAEDAKKPRSGRSVFDRI 291          
BLAST of HO067555 vs. TrEMBL
Match: Q7XR25_ORYSJ (OSJNBb0022F23.5 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0022F23.5 PE=4 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 1.964e-9
Identity = 56/162 (34.57%), Postives = 75/162 (46.30%), Query Frame = 3
Query:  135 DWKGLLGREAEAQLPQSFVVDSMHLEEKVQSKVNRGSRSLSPAPPVQRKRGCDVEQQKTKRDSVSQGTIDAPRRLLQFAMRDAVATSRPSNLGTP-VEPSLKRLRXXXXXXXXXXXXXEHPPRMQTNSRVVNPMAPMXXXXXXXXXXXXXXKSSASVFNRLG 617
            +W G++  ++E    +S V   +H EEK  +K +   R+ SP    QRKR  + ++++ KR   S   IDAPRRLLQFA+RDAV   RP    TP  E + KRLR                 R  ++ RV    A                K S SVF RLG
Sbjct:  141 EWGGIVRDQSETVPLRSVVTTVLHAEEKDVNKSHARRRTHSPDMHHQRKRSREDDERQIKR--TSHQDIDAPRRLLQFAVRDAV---RPVQPITPRSESASKRLRSVVSTMPSDSPLDVRLQRTNSDVRVPGVTAAALRAAAEAAEDVLKEKYSGSVFRRLG 297          
BLAST of HO067555 vs. TrEMBL
Match: Q01IL0_ORYSA (B0806H07.2 protein OS=Oryza sativa GN=H0305E08.1 PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.964e-9
Identity = 56/162 (34.57%), Postives = 75/162 (46.30%), Query Frame = 3
Query:  135 DWKGLLGREAEAQLPQSFVVDSMHLEEKVQSKVNRGSRSLSPAPPVQRKRGCDVEQQKTKRDSVSQGTIDAPRRLLQFAMRDAVATSRPSNLGTP-VEPSLKRLRXXXXXXXXXXXXXEHPPRMQTNSRVVNPMAPMXXXXXXXXXXXXXXKSSASVFNRLG 617
            +W G++  ++E    +S V   +H EEK  +K +   R+ SP    QRKR  + ++++ KR   S   IDAPRRLLQFA+RDAV   RP    TP  E + KRLR                 R  ++ RV    A                K S SVF RLG
Sbjct:  141 EWGGIVRDQSETVPLRSVVTTVLHAEEKDVNKSHARRRTHSPDMHHQRKRSREDDERQIKR--TSHQDIDAPRRLLQFAVRDAV---RPVQPITPRSESASKRLRSVVSTMPSDSPLDVRLQRTNSDVRVPGVTAAALRAAAEAAEDVLKEKYSGSVFRRLG 297          
BLAST of HO067555 vs. TrEMBL
Match: Q6ZK85_ORYSJ (Os08g0504600 protein OS=Oryza sativa subsp. japonica GN=OJ1134_H03.9-1 PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 2.836e-8
Identity = 45/105 (42.86%), Postives = 57/105 (54.29%), Query Frame = 3
Query:  135 DWKGLLGREAEAQLP-QSFVVDSMHLEEKVQSKVNRGSRSLSPAPPVQRKRGCDVEQQKTKRDSVSQGTIDAPRRLLQFAMRDAVATSRPSNLGTPVEPSLKRLR 446
            DWKG+ GRE     P +S + D +H EEK   KVN      S      RKR  D E Q+ KRD   +  + A  RLL+FA+RDAV   + ++  T  EPS KRLR
Sbjct:  151 DWKGI-GREGNENFPLRSVLKDILHGEEKRSQKVNEIRHPPSSNQRNGRKRDRDDEPQQIKRDLPLRRDVGASCRLLKFAVRDAVKAVQQTSSST--EPSSKRLR 252          
BLAST of HO067555 vs. TAIR peptide
Match: AT3G12640.1 (| Symbols: | RNA binding (RRM/RBD/RNP motifs) family protein | chr3:4014455-4017675 FORWARD LENGTH=638)

HSP 1 Score: 61.6178 bits (148), Expect = 4.372e-10
Identity = 44/121 (36.36%), Postives = 61/121 (50.41%), Query Frame = 3
Query:  252 LSPAPPVQRKRGCDVEQQKTKRDSVSQGTIDAPRRLLQFAMRDAVATSRPSNLGTPVEPSLKRLRXXXXXXXXXXXXXEHPPRMQTNSRVVNPMAPMXXXXXXXXXXXXXXKSSASVFNRL 614
            LS     QRKR    + +  +R++      D  RRLLQFA+RDA+A SRP+N  T  E SLKRLR             +   ++++ +RVVNPMA +              KS  SVF+R+
Sbjct:  152 LSSEAQSQRKRSRTDDSRNEQREAKP----DVSRRLLQFAVRDALAISRPANSST--ESSLKRLRSVVSTSTQNSSDPDPARKIRSVARVVNPMATVMKAVAEAAEDAKKPKSGRSVFDRI 266          
The following BLAST results are available for this feature:
BLAST of HO067555 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9GFQ2_POPTR6.077e-2746.43Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9HNM5_POPTR5.144e-2645.83Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7T2Y5_VITVI1.401e-2343.48Whole genome shotgun sequence of line PN40024, sca... [more]
B9RHF9_RICCO9.102e-1544.74Poly-A binding protein, putative OS=Ricinus commun... [more]
Q9LTX1_ARATH6.105e-1136.17Similarity to poly(A)-binding protein OS=Arabidops... [more]
Q9C7B4_ARATH1.360e-1034.90Putative uncharacterized protein T2E22.5 OS=Arabid... [more]
D7L0I8_ARALY1.151e-934.75Predicted protein OS=Arabidopsis lyrata subsp. lyr... [more]
Q7XR25_ORYSJ1.964e-934.57OSJNBb0022F23.5 protein OS=Oryza sativa subsp. jap... [more]
Q01IL0_ORYSA1.964e-934.57B0806H07.2 protein OS=Oryza sativa GN=H0305E08.1 P... [more]
Q6ZK85_ORYSJ2.836e-842.86Os08g0504600 protein OS=Oryza sativa subsp. japoni... [more]
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BLAST of HO067555 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G12640.14.372e-1036.36| Symbols: | RNA binding (RRM/RBD/RNP motifs) fam... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 31..44
score: NAcoord: 149..161
score: NAcoord: 181..194
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO067555 ID=HO067555; Name=HO067555; organism=Cicer arietinum; type=EST; length=673bp
AGGTACAATCCAAAGGATCGCAGGATGAAGCTCCCAAAAGCAAGCTCCTA
TCAAAGGTCGAAGATGGAGATGATGGTCTTCAGAATTTGAATTCAAAATC
AGAAAGAGTAAAGTCTAGAAGTCGCCGTAACAAAGATTGGAAAGGGTTAC
TAGGGAGAGAAGCTGAAGCACAACTGCCACAGAGCTTTGTGGTTGACAGT
ATGCATTTGGAAGAAAAAGTCCAATCTAAAGTCAACCGTGGTTCAAGGTC
ACTATCTCCTGCACCACCTGTTCAGAGGAAAAGGGGTTGTGATGTTGAAC
AACAGAAAACTAAGAGGGATTCTGTTTCACAAGGAACTATTGATGCCCCT
CGACGGTTGCTTCAGTTTGCAATGCGAGATGCAGTGGCGACCTCTAGGCC
ATCTAATTTGGGCACACCGGTGGAGCCCTCTTTAAAGCGTCTCCGTTCTG
TAGTTTCATCATCCTTTGTTGAGTCATCGATGGTTGAACATCCTCCTAGG
ATGCAGACCAATTCCAGGGTGGTAAACCCCATGGCTCCCATGTTTAAGGC
TGTGGCAGAAGCTGCTGAAGGCGCGGTAAAGTTCAAATCATCAGCAAGTG
TATTCAATCGGCTTGGTTGCGATATGCATCAATCAGATGGTATCATGCAA
CTCAAAGATAACCAATATCAGGA
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