HO664329

EST Overview
NameHO664329
Unique NameHO664329
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length627
Libraries
Library NameType
LIBEST_026619 TDZ treated Chickpea SSH librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO664329 vs. TrEMBL
Match: D7T1R0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_9.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00037598001 PE=4 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.596e-12
Identity = 56/157 (35.67%), Postives = 78/157 (49.68%), Query Frame = -3
Query:  158 NDVMDGRNGVRPQFGSTTVKSVLPNIHPIVASHKXXXXXXXXXXXXXXXXSAGLIETSNTQSVKPKSDANVQNPVEETXXXXXXXXXXXN-PKERNSQADKQAKKRLSLPNNAGVGSAAQTAKYPTRTNVKGTRSMQKPTRDKPKLNEGGDGNLTKS 625
            N   +G+NG + Q  S   K +  N+     S++                SA   E S+T S KPKS   +++  EE            + PKER++  DKQAKKRLSLPN+ G+GS AQ  +  +R+ +K   S QKP +D  K+N  GD   TKS
Sbjct:  278 NGSTEGKNGSKTQSKSAGKKPISLNL-----SNQKMGPSNSDGGSSSPTKSAMFQEASSTVSAKPKSKPILEDLAEEANSRPGVGSRSHSNPKERSTLQDKQAKKRLSLPNS-GIGSGAQATRQQSRSVLKKAASAQKPIKDNSKVNIKGDLETTKS 428          
BLAST of HO664329 vs. TrEMBL
Match: A5BY79_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031264 PE=4 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.596e-12
Identity = 56/157 (35.67%), Postives = 78/157 (49.68%), Query Frame = -3
Query:  158 NDVMDGRNGVRPQFGSTTVKSVLPNIHPIVASHKXXXXXXXXXXXXXXXXSAGLIETSNTQSVKPKSDANVQNPVEETXXXXXXXXXXXN-PKERNSQADKQAKKRLSLPNNAGVGSAAQTAKYPTRTNVKGTRSMQKPTRDKPKLNEGGDGNLTKS 625
            N   +G+NG + Q  S   K +  N+     S++                SA   E S+T S KPKS   +++  EE            + PKER++  DKQAKKRLSLPN+ G+GS AQ  +  +R+ +K   S QKP +D  K+N  GD   TKS
Sbjct: 1716 NGSTEGKNGSKTQSKSAGKKPISLNL-----SNQKMGPSNSDGGSSSPTKSAMFQEASSTVSAKPKSKPILEDLAEEANSRPGVGSRSHSNPKERSTLQDKQAKKRLSLPNS-GIGSGAQATRQQSRSVLKKAASAQKPIKDNSKVNIKGDLETTKS 1866          
BLAST of HO664329 vs. TrEMBL
Match: B9RJ06_RICCO (Calmodulin binding protein, putative OS=Ricinus communis GN=RCOM_1754220 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.044e-11
Identity = 54/160 (33.75%), Postives = 79/160 (49.38%), Query Frame = -3
Query:  149 NDVMDGRNGVRPQFGSTTVKSVLPNIHPIVASHKXXXXXXXXXXXXXXXXSAGLIETSNTQSVKPKSDANVQNPVEETXXXXXXXXXXXN-PKERNSQADKQAKKRLSLPNNAGVGSAAQTAKYPTRTNVKGTRSMQKPTRDKPKLNEGGDGNLTKSVPQ 625
            N   +G+NG +P   S+  K  L ++   +++ K                  G++E+SNT   KPK    +++  EE            + PKER+ Q DK AKKRLSLPN+ G  + AQ A++ +R   +G     K  RDKPKLN  G+ + TK V Q
Sbjct:  277 NGNSEGKNGSKPLLRSSG-KKPLSSLQSNLSNQKTGPSHSDGSSSPSKS--TGMLESSNTLFAKPKPKPVLEDLSEEVNLKPGTVQRSQSNPKERSIQPDKPAKKRLSLPNSGG-SAGAQPARH-SRIAARGAPGPHKSVRDKPKLNSKGESDTTKPVTQ 431          
The following BLAST results are available for this feature:
BLAST of HO664329 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
D7T1R0_VITVI3.596e-1235.67Whole genome shotgun sequence of line PN40024, sca... [more]
A5BY79_VITVI3.596e-1235.67Putative uncharacterized protein OS=Vitis vinifera... [more]
B9RJ06_RICCO3.044e-1133.75Calmodulin binding protein, putative OS=Ricinus co... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 22..33
score
NoneNo IPR availableSEGsegsegcoord: 35..51
score: NAcoord: 79..90
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO664329 ID=HO664329; Name=HO664329; organism=Cicer arietinum; type=EST; length=627bp
TCGAGCGGCCGCCCGGGCAGGTACATTCCGGTTGCAACGCCTCAACTCTT
TGCCTCATGCATTACATATGTTACAGACAAATTTCACATGAGGACCTCAA
TGGAGAATGAAGTAGTTTCTCAATACTTAAAAGTTACCCAACTTCAGGTT
GTGGAACAGATTTAGTAAGATTCCCATCCCCTCCTTCATTGAGCTTAGGT
TTATCCCTTGTAGGCTTTTGCATGCTTCGCGTCCCTTTCACATTAGTTCT
AGTAGGATATTTGGCCGTTTGAGCTGCGGAACCAACCCCTGCGTTGTTAG
GAAGAGATAATCGCTTTTTTGCCTGTTTATCTGCCTGCGAATTTCTCTCC
TTGGGATTACTTTGAGATCTTTGATTTCTAGACTTTGAGTTGGTTTCTTC
AACGGGATTTTGAACATTTGCATCAGATTTTGGTTTAACAGATTGTGTGT
TCGATGTCTCAATCAAACCTGCTGACTTGCTAGGGGAAGAAGAATCACAG
CCATCAGAGAAGGAAGGACCGGATTTGTGACTTGCAACGATTGGATGAAT
ATTTGGCAGAACTGATTTCACAGTGGTAGACCCGAACTGAGGTCTGACGC
CGTTCCTACCATCCATGACATCATTTT
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