GO660547

EST Overview
NameGO660547
Unique NameGO660547
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length226
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of GO660547 vs. TrEMBL
Match: B9R706_RICCO (E3 ubiquitin ligase PUB14, putative OS=Ricinus communis GN=RCOM_1587530 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.005e-8
Identity = 33/48 (68.75%), Postives = 39/48 (81.25%), Query Frame = 1
Query:   13 QFTTTSSQS*RLLISCAFENSNDFIRQLVSDIHSSSIKDQ*QAAMEIR 156
            +F T SS+S RLLI+CA ENS+DFIRQLV D+ S SI +Q QAAMEIR
Sbjct:   38 EFPTASSESRRLLIACAAENSDDFIRQLVLDLESCSIDEQKQAAMEIR 85          
BLAST of GO660547 vs. TrEMBL
Match: B9GNP8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_551785 PE=4 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 4.989e-8
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 1
Query:   13 QFTTTSSQS*RLLISCAFENSNDFIRQLVSDIHSSSIKDQ*QAAMEIR 156
            +F  ++SQS RLL+SCA +NS+D IRQLVSD+ S SI +Q QAAMEIR
Sbjct:   40 EFPASASQSRRLLLSCAADNSDDLIRQLVSDLESCSIDEQKQAAMEIR 87          
BLAST of GO660547 vs. TAIR peptide
Match: AT3G01400.1 (| Symbols: | ARM repeat superfamily protein | chr3:151920-152987 FORWARD LENGTH=355)

HSP 1 Score: 53.9138 bits (128), Expect = 2.350e-8
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 1
Query:   13 QFTTTSSQS*RLLISCAFENSNDFIRQLVSDIHSS-SIKDQ*QAAMEIR 156
            +F T SS+S RLL+SCA ENS+D I  LVS + SS SI +Q QAAMEIR
Sbjct:   40 EFPTASSESRRLLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAMEIR 88          
The following BLAST results are available for this feature:
BLAST of GO660547 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2
Match NameE-valueIdentityDescription
B9R706_RICCO1.005e-868.75E3 ubiquitin ligase PUB14, putative OS=Ricinus com... [more]
B9GNP8_POPTR4.989e-864.58Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
back to top
BLAST of GO660547 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G01400.12.350e-863.27| Symbols: | ARM repeat superfamily protein | chr... [more]
back to top
Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GO660547 ID=GO660547; Name=GO660547; organism=Cicer arietinum; type=EST; length=226bp
TTGACTGCGTACCAATTCACCACCACTTCTTCACAATCCTGACGACTCCT
CATCTCATGTGCTTTCGAAAATTCCAATGATTTCATCCGTCAACTTGTTT
CCGATATTCACTCTTCTTCAATCAAAGACCAGTAACAAGCCGCCATGGAA
ATTCGACACCACCACACGTCGGAATGCCACTAACCTCTGATCTTCACATT
GTGTATTAGTTACTCAGGACTCATCA
back to top