HO065965
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO065965 vs. SwissProt
Match: PSBR_SOLTU (Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum tuberosum GN=PSBR PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 3.025e-36 Identity = 75/105 (71.43%), Postives = 89/105 (84.76%), Query Frame = -1 Query: 1 MASSVMASLSLKPTPFTIEKSSVKGLPSISRP---FRVVASGIKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDV 306 MAS+VM+SLSLKPT FT+EK+SVKGLPS++R F+VVASG+KK+KTD PYG G M L +G+DASGRK KGKGVYQ+VDKYGANVDGYSPIY +WS +GDV Sbjct: 1 MASTVMSSLSLKPT-FTLEKTSVKGLPSLARSSSSFKVVASGVKKLKTDKPYGINGSMALRDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDV 104
BLAST of HO065965 vs. SwissProt
Match: PSBR_TOBAC (Photosystem II 10 kDa polypeptide, chloroplastic OS=Nicotiana tabacum GN=PSBR PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 6.738e-36 Identity = 74/105 (70.48%), Postives = 86/105 (81.90%), Query Frame = -1 Query: 1 MASSVMASLSLKPTPFTIEKSSVKGLPSISRP---FRVVASGIKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDV 306 MAS+VM SLKP PF++EK++VKGLPS++R FRV ASG+KK+KTD PYG G M L +G+DASGRKQKGKGVYQFVDKYGANVDGYSPIY DWS +GDV Sbjct: 1 MASTVM---SLKPAPFSVEKTAVKGLPSLARSSSSFRVQASGVKKLKTDKPYGINGSMSLRDGVDASGRKQKGKGVYQFVDKYGANVDGYSPIYNTDDWSPSGDV 102
BLAST of HO065965 vs. SwissProt
Match: PSBR_SOLLC (Photosystem II 10 kDa polypeptide, chloroplastic OS=Solanum lycopersicum GN=PSBR PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 6.738e-36 Identity = 75/105 (71.43%), Postives = 88/105 (83.81%), Query Frame = -1 Query: 1 MASSVMASLSLKPTPFTIEKSSVKGLPSISRP---FRVVASGIKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDV 306 MAS+VM+SLSLKPT FT+EK SVKGLPS++R F+VVASG+KK+KTD PYG G M L +G+DASGRK KGKGVYQ+VDKYGANVDGYSPIY +WS +GDV Sbjct: 1 MASTVMSSLSLKPT-FTLEKISVKGLPSLTRSSSSFKVVASGVKKLKTDKPYGINGSMALRDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDV 104
BLAST of HO065965 vs. SwissProt
Match: PSBR_BRACM (Photosystem II 10 kDa polypeptide, chloroplastic OS=Brassica campestris GN=PSBR PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.831e-34 Identity = 71/107 (66.36%), Postives = 87/107 (81.31%), Query Frame = -1 Query: 1 MASSVM-ASLSLKPTPFTIEKSSVKGLPSISRP----FRVVASGIKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDV 306 MA+SVM +S++LKP FT+EK S +GLPS++R FR+VASG+KKIKTD P+G G MDL +G+DASGRK KG GVY+FVDKYGANVDGYSPIY +WSA+GDV Sbjct: 1 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSMDLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDV 107
BLAST of HO065965 vs. SwissProt
Match: PSBR_SPIOL (Photosystem II 10 kDa polypeptide, chloroplastic OS=Spinacia oleracea GN=PSBR PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.076e-33 Identity = 72/106 (67.92%), Postives = 86/106 (81.13%), Query Frame = -1 Query: 1 MASSVMASLSLKPTPFTIE-KSSVKGLPSISRP---FRVVASGIKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDV 306 MA+SVM+SLSLKP+ F ++ KS+VKGLPS+SR F V ASG+KKIK D P G GGGM L +G+D+SGRK GKGVYQFVDKYGANVDGYSPIY ++W+ TGDV Sbjct: 1 MATSVMSSLSLKPSSFGVDTKSAVKGLPSLSRSSASFTVRASGVKKIKVDKPLGIGGGMKLRDGVDSSGRKPTGKGVYQFVDKYGANVDGYSPIYNEEEWAPTGDV 106
BLAST of HO065965 vs. SwissProt
Match: PSBR_ARATH (Photosystem II 10 kDa polypeptide, chloroplastic OS=Arabidopsis thaliana GN=PSBR PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.405e-33 Identity = 68/106 (64.15%), Postives = 88/106 (83.02%), Query Frame = -1 Query: 1 MASSVM-ASLSLKPTPFTIEKSSVKGLPSISRP---FRVVASGIKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDV 306 MA+SVM +S++LKP FT+EK++ +GLPS++R F++VASG+KKIKTD P+G G MDL +G+DASGRK KG GVY++VDKYGANVDGYSPIY +WSA+GDV Sbjct: 1 MAASVMLSSVTLKPAGFTVEKTAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMDLRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDV 106
BLAST of HO065965 vs. SwissProt
Match: PSBR_HORVU (Photosystem II 10 kDa polypeptide, chloroplastic OS=Hordeum vulgare GN=PSBR PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.322e-26 Identity = 59/104 (56.73%), Postives = 76/104 (73.08%), Query Frame = -1 Query: 1 MASSVMASLSLKPTPFTI-EKSSVKGLPSISRPFRV-VASGIKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDV 306 M++ VMASL+LKP+ + ++S + G+ +RP V VA KK++T PYG GGG+ G+DASGR KGKGVYQF DKYGANVDGYSPIY P++WS +GDV Sbjct: 1 MSACVMASLALKPSSSPLLQRSKLGGVRPSARPSLVIVAKKAKKVQTAQPYGPGGGVAFKEGVDASGRVAKGKGVYQFADKYGANVDGYSPIYTPEEWSPSGDV 104
BLAST of HO065965 vs. TrEMBL
Match: B0L635_CICAR (10 kDa photosystem II polypeptide (Fragment) OS=Cicer arietinum PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.123e-52 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = -1 Query: 1 MASSVMASLSLKPTPFTIEKSSVKGLPSISRPFRVVASGIKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDV 306 MASSVMASLSLKPTPFTIEKSSVKGLPSISRPFRVVASGIKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDV Sbjct: 1 MASSVMASLSLKPTPFTIEKSSVKGLPSISRPFRVVASGIKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDV 102
BLAST of HO065965 vs. TrEMBL
Match: Q6V7X5_TRIPR (10 kDa photosystem II polypeptide OS=Trifolium pratense PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 6.810e-50 Identity = 94/102 (92.16%), Postives = 100/102 (98.04%), Query Frame = -1 Query: 1 MASSVMASLSLKPTPFTIEKSSVKGLPSISRPFRVVASGIKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDV 306 MASSVMAS+SLKPTPF +EKSSV+GLP++SRPFRVVASG+KKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWS TGDV Sbjct: 1 MASSVMASVSLKPTPFMVEKSSVRGLPNLSRPFRVVASGVKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSPTGDV 102
BLAST of HO065965 vs. TrEMBL
Match: A9PH94_POPTR (Putative uncharacterized protein OS=Populus trichocarpa GN=POPTRDRAFT_674736 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 9.857e-41 Identity = 81/103 (78.64%), Postives = 94/103 (91.26%), Query Frame = -1 Query: 1 MASSVMASLSLKPTPFTIEKSSVKGLPSISR-PFRVVASGIKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDV 306 MA+SVMASLSLKP+PFT+EKSSV+GLP++SR F++ ASG+KKIKTDTPYGTGGGM+L +GLDASGRK KGKGVYQ+VDKYGANVDGYSPIY +WS TGDV Sbjct: 1 MAASVMASLSLKPSPFTVEKSSVRGLPTLSRRTFKIEASGVKKIKTDTPYGTGGGMNLRDGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDV 103
BLAST of HO065965 vs. TrEMBL
Match: A9PIM0_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 2.868e-40 Identity = 80/103 (77.67%), Postives = 94/103 (91.26%), Query Frame = -1 Query: 1 MASSVMASLSLKPTPFTIEKSSVKGLPSISR-PFRVVASGIKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDV 306 MA+SVMASLSLKP+PFT+EKSSV+GLP++SR F++ ASG+KKIKTDTPYGTGGGM+L +GLDASGRK KGKGVYQ+VDKYGANVDGYSPIY +WS +GDV Sbjct: 1 MAASVMASLSLKPSPFTVEKSSVRGLPTLSRRSFKIEASGVKKIKTDTPYGTGGGMNLRDGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDV 103
BLAST of HO065965 vs. TrEMBL
Match: A9PHU8_POPTR (Putative uncharacterized protein OS=Populus trichocarpa GN=POPTRDRAFT_569170 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 3.746e-40 Identity = 79/103 (76.70%), Postives = 94/103 (91.26%), Query Frame = -1 Query: 1 MASSVMASLSLKPTPFTIEKSSVKGLPSISR-PFRVVASGIKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDV 306 MA+SVMASL+LKP+PFT+EKSSV+GLP++SR F++ ASG+KKIKTDTPYGTGGGM+L NGLDASGRK +GKGVYQ+VDKYGANVDGYSPIY +WS +GDV Sbjct: 1 MAASVMASLNLKPSPFTVEKSSVRGLPTLSRRSFKIEASGVKKIKTDTPYGTGGGMNLRNGLDASGRKPRGKGVYQYVDKYGANVDGYSPIYNADEWSPSGDV 103
BLAST of HO065965 vs. TrEMBL
Match: C6SW43_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.859e-39 Identity = 83/105 (79.05%), Postives = 90/105 (85.71%), Query Frame = -1 Query: 1 MASSVMASLSLKPTPFTIEKSSVKGLPSISR---PFRVVASGIKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDV 306 MASSVMAS++LKP PFT+EKSSV+GLPS+SR FRVVASG KKIKTD PYG GGM L G+DASGRK KGKGVYQFVDKYGANVDGYSPIY+ KDWS TGDV Sbjct: 1 MASSVMASVALKPAPFTVEKSSVRGLPSLSRNSSSFRVVASGGKKIKTDKPYGINGGMALREGVDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDV 105
BLAST of HO065965 vs. TrEMBL
Match: A9PJW8_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 9.226e-39 Identity = 80/103 (77.67%), Postives = 93/103 (90.29%), Query Frame = -1 Query: 1 MASSVMASLSLKPTPFTIEKSSVKGLPSISR-PFRVVASGIKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDV 306 MA+SVMASLSLKP+PFT+EKSSV+GLP++SR F++ ASG+K IKTDTPYGTGGGM+L +GLDASGRK KGKGVYQ+VDKYGANVDGYSPIY +WS TGDV Sbjct: 1 MAASVMASLSLKPSPFTVEKSSVRGLPTLSRRTFKIEASGVK-IKTDTPYGTGGGMNLRDGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDV 102
BLAST of HO065965 vs. TrEMBL
Match: C6SWI3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.055e-38 Identity = 83/105 (79.05%), Postives = 90/105 (85.71%), Query Frame = -1 Query: 1 MASSVMASLSLKPTPFTIEKSSVKGLPSISR---PFRVVASGIKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDV 306 MASSVMAS++LKP PFT+EKSSV+GLPS+SR FRVVASG KKIKTD PYG GGM L +G DASGRK KGKGVYQFVDKYGANVDGYSPIY+ KDWS TGDV Sbjct: 1 MASSVMASVALKPAPFTVEKSSVRGLPSLSRNSSSFRVVASG-KKIKTDKPYGINGGMALRDGTDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDV 104
BLAST of HO065965 vs. TrEMBL
Match: A8VIE2_PROJU (Chloroplast photosystem II PsbR OS=Prosopsis juliflora GN=PsbR PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.740e-37 Identity = 78/105 (74.29%), Postives = 89/105 (84.76%), Query Frame = -1 Query: 1 MASSVMASLSLKPTPFTIEKSSVKGLPSISRP---FRVVASGIKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDV 306 MASSVMAS+SLKP PFT+EKS+V+GLPS+SR F+VVASG KKIKTD PYG GGM+L G+D+SGRK KGKGVYQFVDKYG NVDGYSPIY +DWS +GDV Sbjct: 1 MASSVMASVSLKPAPFTVEKSAVRGLPSLSRSSSSFKVVASGGKKIKTDKPYGINGGMNLVEGVDSSGRKGKGKGVYQFVDKYGTNVDGYSPIYNTEDWSPSGDV 105
BLAST of HO065965 vs. TrEMBL
Match: B9SVD3_RICCO (Photosystem II 10 kDa polypeptide, chloroplast, putative OS=Ricinus communis GN=RCOM_0565210 PE=4 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 3.876e-37 Identity = 79/104 (75.96%), Postives = 90/104 (86.54%), Query Frame = -1 Query: 1 MASSVMASLSLKPTPFTIEKSS-VKGLPSISR-PFRVVASGIKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDV 306 MASSVMAS+SLKP+PFT++KSS V+GLP++SR FR+ ASG KKIKTD PYG GGGM+L NG+DASGRK GKGVYQFVDKYGANVDGYSPIY +WS TGDV Sbjct: 1 MASSVMASVSLKPSPFTVQKSSSVRGLPTLSRRTFRIEASGGKKIKTDKPYGIGGGMELRNGVDASGRKPTGKGVYQFVDKYGANVDGYSPIYNTDEWSPTGDV 104
BLAST of HO065965 vs. TAIR peptide
Match: AT1G79040.1 (| Symbols: PSBR | photosystem II subunit R | chr1:29736085-29736781 FORWARD LENGTH=140) HSP 1 Score: 141.354 bits (355), Expect = 1.241e-34 Identity = 68/106 (64.15%), Postives = 88/106 (83.02%), Query Frame = -1 Query: 1 MASSVM-ASLSLKPTPFTIEKSSVKGLPSISRP---FRVVASGIKKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSATGDV 306 MA+SVM +S++LKP FT+EK++ +GLPS++R F++VASG+KKIKTD P+G G MDL +G+DASGRK KG GVY++VDKYGANVDGYSPIY +WSA+GDV Sbjct: 1 MAASVMLSSVTLKPAGFTVEKTAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMDLRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDV 106 The following BLAST results are available for this feature:
BLAST of HO065965 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 7
BLAST of HO065965 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of HO065965 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO065965 ID=HO065965; Name=HO065965; organism=Cicer arietinum; type=EST; length=369bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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