HO067299

EST Overview


Name	HO067299
Unique Name	HO067299
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	596

Libraries


Library Name	Type
LIBEST_026414 Chickpea drought stressed cDNA SSH library BULK1	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of HO067299 vs. SwissProt
Match: AB3F_ARATH (ABC transporter F family member 3 OS=Arabidopsis thaliana GN=ABCF3 PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 7.767e-70
Identity = 127/185 (68.65%), Postives = 147/185 (79.46%), Query Frame = -3

Query:    7 VRMNEGLDDGEAPKKKPEPVDGPLLSXXXXXXXXXXXXXXXXXXEAKFQLHLAEMEAVRAGMPVACVKHEGGGGHTVKDIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQLLAKQRESEDST 561
            VRMN+G+DDG   KKKPEPVDGPLL+                  E ++Q H+AEMEA +AGMP   V H+ GGG  ++DIHMDNF +SVGG DLIVDGS+TLSFGRHYGLVGRNGTGKTTFLR+MAMHAI+GIP NCQILHVEQEVVGD T+ALQCVLNTDIER +L+EEE Q+LAKQRE+E+ T
Sbjct:   96 VRMNDGMDDGPVKKKKPEPVDGPLLTERDLAKIERRKKKDDRQRELQYQQHVAEMEAAKAGMPTVSVNHDTGGGSAIRDIHMDNFNVSVGGRDLIVDGSITLSFGRHYGLVGRNGTGKTTFLRYMAMHAIEGIPTNCQILHVEQEVVGDKTTALQCVLNTDIERTKLLEEEIQILAKQRETEEPT 280

[Close]

BLAST of HO067299 vs. SwissProt
Match: GCN20_YEAST (Protein GCN20 OS=Saccharomyces cerevisiae GN=GCN20 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.291e-21
Identity = 52/113 (46.02%), Postives = 76/113 (67.26%), Query Frame = -3

Query:   16 GGGGHTVKDIHMDNFTISVG-GHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQLLAKQRESE 351
            G      KDIH+D F + VG G  ++ +  +TLSFG  YGLVG+NG GK+T LR ++   ++ +P++  ILHVEQE+ GDDT ALQ VL+ D+ R QL+ EEA++  + +E +
Sbjct:  190 GSSAGKSKDIHIDTFDLYVGDGQRILSNAQLTLSFGHRYGLVGQNGIGKSTLLRALSRRELN-VPKHVSILHVEQELRGDDTKALQSVLDADVWRKQLLSEEAKINERLKEMD 301

[Close]

BLAST of HO067299 vs. SwissProt
Match: ABCF3_HUMAN (ATP-binding cassette sub-family F member 3 OS=Homo sapiens GN=ABCF3 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 7.371e-20
Identity = 55/128 (42.97%), Postives = 76/128 (59.38%), Query Frame = -3

Query:   31 LHLAEMEAVRAGMPVACVKHEGGGGHTVKDIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQLLAK 414
            L L E  A +AG      + E  G +   D+ ++NF +S G   L+    V L++GR YGLVGRNG GKTT L+ +A  ++  +P +  +LHVEQEV GDDT ALQ VL +D  R  L+  E +L A+
Sbjct:  149 LVLEEASASQAGSRKES-RLESSGKNKSYDVRIENFDVSFGDRVLLAGADVNLAWGRRYGLVGRNGLGKTTLLKMLATRSL-RVPAHISLLHVEQEVAGDDTPALQSVLESDSVREDLLRRERELTAQ 274

[Close]

BLAST of HO067299 vs. SwissProt
Match: ABCF3_MOUSE (ATP-binding cassette sub-family F member 3 OS=Mus musculus GN=Abcf3 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 9.627e-20
Identity = 54/125 (43.20%), Postives = 75/125 (60.00%), Query Frame = -3

Query:   40 LHLAEMEAVRAGMPVACVKHEGGGGHTVKDIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQL 414
            L L E  A +AG      + E  G +   D+ ++NF +S G   L+    V L++GR YGLVGRNG GKTT L+ +A  ++  +P +  +LHVEQEV GDDT ALQ VL +D  R  L+ +E +L
Sbjct:  149 LVLEEASASQAGSRKES-RLESSGKNKSYDVRIENFDVSFGDRVLLAGADVNLAWGRRYGLVGRNGLGKTTLLKMLATRSL-RVPAHISLLHVEQEVAGDDTPALQSVLESDTVREDLLRQEREL 271

[Close]

BLAST of HO067299 vs. SwissProt
Match: ABCF3_RAT (ATP-binding cassette sub-family F member 3 OS=Rattus norvegicus GN=Abcf3 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.145e-19
Identity = 55/128 (42.97%), Postives = 75/128 (58.59%), Query Frame = -3

Query:   31 LHLAEMEAVRAGMPVACVKHEGGGGHTVKDIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQLLAK 414
            L L E  A +AG      + E  G +   D+ ++NF +S G   L+    V L++GR YGLVGRNG GKTT L+ +A  ++  +P +  +LHVEQEV GDDT ALQ VL +D  R  L+ +E  L  K
Sbjct:  149 LVLEEASASQAGSRKES-RLESSGKNKSYDVRIENFDVSFGDRVLLAGADVNLAWGRRYGLVGRNGLGKTTLLKMLATRSL-RVPAHISLLHVEQEVAGDDTPALQSVLESDTIREDLLRQERGLSLK 274

[Close]

BLAST of HO067299 vs. SwissProt
Match: ABCF1_RAT (ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus GN=Abcf1 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.240e-19
Identity = 48/106 (45.28%), Postives = 69/106 (65.09%), Query Frame = -3

Query:   10 DIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQLLAKQRESEDS 327
            DI ++ F+IS  G +L V+  + +  GR YGLVG NG GKTT L+H+A  A+  IP N  +L  EQEVV D+T A+Q VL  D +R +L+EEE +L  +  + +D+
Sbjct:  297 DIKLEKFSISAHGKELFVNADLYIVAGRRYGLVGPNGKGKTTLLKHIANRAL-SIPPNIDVLLCEQEVVADETPAVQAVLRADTKRLRLLEEEKRLQGQLEQGDDT 401

[Close]

BLAST of HO067299 vs. SwissProt
Match: ABCF1_PIG (ATP-binding cassette sub-family F member 1 OS=Sus scrofa GN=ABCF1 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.240e-19
Identity = 48/106 (45.28%), Postives = 69/106 (65.09%), Query Frame = -3

Query:   10 DIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQLLAKQRESEDS 327
            DI ++ F+IS  G +L V+  + +  GR YGLVG NG GKTT L+H+A  A+  IP N  +L  EQEVV D+T A+Q VL  D +R +L+EEE +L  +  + +D+
Sbjct:  265 DIKLEKFSISAHGKELFVNADLYIVAGRRYGLVGPNGKGKTTLLKHIANRAL-SIPPNIDVLLCEQEVVADETPAVQAVLRADTKRLKLLEEERRLQGQLEQGDDT 369

[Close]

BLAST of HO067299 vs. SwissProt
Match: ABCF1_MOUSE (ATP-binding cassette sub-family F member 1 OS=Mus musculus GN=Abcf1 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.240e-19
Identity = 48/106 (45.28%), Postives = 69/106 (65.09%), Query Frame = -3

Query:   10 DIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQLLAKQRESEDS 327
            DI ++ F+IS  G +L V+  + +  GR YGLVG NG GKTT L+H+A  A+  IP N  +L  EQEVV D+T A+Q VL  D +R +L+EEE +L  +  + +D+
Sbjct:  295 DIKLEKFSISAHGKELFVNADLYIVAGRRYGLVGPNGKGKTTLLKHIANRAL-SIPPNIDVLLCEQEVVADETPAVQAVLRADTKRLRLLEEERRLQGQLEQGDDT 399

[Close]

BLAST of HO067299 vs. SwissProt
Match: ABCF1_HUMAN (ATP-binding cassette sub-family F member 1 OS=Homo sapiens GN=ABCF1 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 6.240e-19
Identity = 48/106 (45.28%), Postives = 69/106 (65.09%), Query Frame = -3

Query:   10 DIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQLLAKQRESEDS 327
            DI ++ F+IS  G +L V+  + +  GR YGLVG NG GKTT L+H+A  A+  IP N  +L  EQEVV D+T A+Q VL  D +R +L+EEE +L  +  + +D+
Sbjct:  303 DIKLEKFSISAHGKELFVNADLYIVAGRRYGLVGPNGKGKTTLLKHIANRAL-SIPPNIDVLLCEQEVVADETPAVQAVLRADTKRLKLLEEERRLQGQLEQGDDT 407

[Close]

BLAST of HO067299 vs. SwissProt
Match: ABCF3_PONAB (ATP-binding cassette sub-family F member 3 OS=Pongo abelii GN=ABCF3 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.064e-18
Identity = 54/127 (42.52%), Postives = 74/127 (58.27%), Query Frame = -3

Query:   34 LHLAEMEAVRAGMPVACVKHEGGGGHTVKDIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQLLA 414
            L L E  A +AG      + E  G +   D+ ++NF +S G   L+    V L++GR YGLVGRNG GKTT L+ +A  ++  +P +  +LHVEQEV  DDT ALQ VL +D  R  L+  E +L A
Sbjct:  149 LVLEEASASQAGSRKES-RLESSGKNKSYDVRIENFDVSFGDRVLLAGADVNLAWGRRYGLVGRNGLGKTTLLKMLATRSL-RVPAHISLLHVEQEVAEDDTPALQSVLESDSVREDLLRRERELSA 273

[Close]

BLAST of HO067299 vs. TrEMBL
Match: Q8W1S2_SOYBN (ABC transporter-like protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.436e-73
Identity = 135/182 (74.18%), Postives = 150/182 (82.42%), Query Frame = -3

Query:   13 RMNEGLDDGEAPKKKPEPVDGPLLSXXXXXXXXXXXXXXXXXXEAKFQLHLAEMEAVRAGMPVACVKHEGGGGHTVKDIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQLLAKQRESED 558
            RMNEG+DD +APKKKPEPVDGPLLS                  EA++Q+HLAEMEA RAGMPV CV+H+  GG  VKDIHM+NF ISVGG DLIVDG VTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDG+PRNCQILHVEQEV GD T+ALQCVLN+DIER QL++EEAQL+A+QRE ED
Sbjct:   97 RMNEGMDDVQAPKKKPEPVDGPLLSERDRLKLERRKRKDERQREAQYQMHLAEMEAARAGMPVVCVRHDNSGGPNVKDIHMENFNISVGGRDLIVDGCVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGVPRNCQILHVEQEVTGDATTALQCVLNSDIERTQLLDEEAQLVAQQREFED 278

[Close]

BLAST of HO067299 vs. TrEMBL
Match: B9RYQ1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1312530 PE=4 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.175e-69
Identity = 136/194 (70.10%), Postives = 151/194 (77.84%), Query Frame = -3

Query:   16 KPRHAVR-------MNEGLDDGEAPKKKPEPVDGPLLSXXXXXXXXXXXXXXXXXXEAKFQLHLAEMEAVRAGMPVACVKHEGGGGHTVKDIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQLLAKQRESE 576
            KP+ AVR       MNEG+D+ + PKKKPE +DGPLL+                  EA++Q+HLAEMEAVRAGMPV CV H+ G G  VKDIHM+NF ISVGG DLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIP NCQILHVEQEVVGDDTSALQCVLNTDIER QL+ EEA +LA+ R+ E
Sbjct:   84 KPKPAVRSLTTPFRMNEGMDE-DVPKKKPEVIDGPLLTERDRAKLERRKRKDERQREAQYQMHLAEMEAVRAGMPVVCVNHDSGTGPAVKDIHMENFNISVGGRDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPSNCQILHVEQEVVGDDTSALQCVLNTDIERTQLLAEEAHILARHRDLE 276

[Close]

BLAST of HO067299 vs. TrEMBL
Match: D7KS83_ARALY (ATGCN3 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_474891 PE=4 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.842e-68
Identity = 127/185 (68.65%), Postives = 146/185 (78.92%), Query Frame = -3

Query:    7 VRMNEGLDDGEAPKKKPEPVDGPLLSXXXXXXXXXXXXXXXXXXEAKFQLHLAEMEAVRAGMPVACVKHEGGGGHTVKDIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQLLAKQRESEDST 561
            VRMN+G+DDG   KKKPEPVDGPLL+                  E ++Q H+AEMEA +AGMP   V H+ GGG  ++DIHMDNF +SVGG DLIVDGS+TLSFGRHYGLVGRNGTGKTTFLR+MAMHAI+GIP NCQILHVEQEVVGD T+ALQCVLNTDIER +L+EEE Q+LAKQRE E+ T
Sbjct:   96 VRMNDGMDDGPVKKKKPEPVDGPLLTERDLAKIERRKKKDDRQRELQYQQHVAEMEAAKAGMPTVSVNHDTGGGSAIRDIHMDNFNVSVGGRDLIVDGSITLSFGRHYGLVGRNGTGKTTFLRYMAMHAIEGIPTNCQILHVEQEVVGDKTTALQCVLNTDIERTKLLEEEIQILAKQREMEEPT 280

[Close]

BLAST of HO067299 vs. TrEMBL
Match: D7TVM3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019609001 PE=4 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 7.737e-67
Identity = 128/194 (65.98%), Postives = 148/194 (76.29%), Query Frame = -3

Query:   16 KPRHAVR-------MNEGLDDGEAPKKKPEPVDGPLLSXXXXXXXXXXXXXXXXXXEAKFQLHLAEMEAVRAGMPVACVKHEGGGGHTVKDIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQLLAKQRESE 576
            KP+ AVR       M +G+D+ E PKKKPE  DGP+L+                  E ++Q+HLAEMEA +AGMPV CV H+   G  +KDIH++NF IS+GG DLIVDGSVTLS+GRHYGLVGRNGTGKTTFLR+MAMHAIDGIP+NCQILHVEQEVVGDD SALQCVLNTDIER QL+EEEA LLA+QRE E
Sbjct:   84 KPKPAVRSLAAPLRMFDGMDEEEVPKKKPEVTDGPILTERDRAKLERRKRKDERQREQQYQMHLAEMEAAKAGMPVVCVNHDNSSGPAIKDIHLENFNISIGGRDLIVDGSVTLSYGRHYGLVGRNGTGKTTFLRYMAMHAIDGIPKNCQILHVEQEVVGDDISALQCVLNTDIERTQLLEEEAHLLAQQRELE 277

[Close]

BLAST of HO067299 vs. TrEMBL
Match: B9GL16_POPTR (ABC transporter family protein OS=Populus trichocarpa GN=POPTRDRAFT_815018 PE=4 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 5.015e-66
Identity = 129/187 (68.98%), Postives = 153/187 (81.82%), Query Frame = -3

Query:    7 RMNEGLDDGEAPKKKPEPVDGPLLSXXXXXXXXXXXXXXXXXXEAKFQLHLAEMEAVRAGMPVACVKHEGGGGH-TVKDIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQLLAKQR--ESEDST 558
            RM++G+D+ E  KKKPEP+DGP+L+                  EA++Q+HLAEMEAVRAGMPVACV H+GGGG   +KDIH++NF ISVGG DLIVDGSVTLSFGRHYGLVGRNGTGKTTFLR+MA+HAIDGIPRNCQILHVEQEVVGDD SALQCVL++DIER +L+EEE +L A+QR  + ED+T
Sbjct:   97 RMDDGMDE-EVKKKKPEPIDGPVLTERDKMKIERRKRKDERQREAQYQIHLAEMEAVRAGMPVACVTHDGGGGGPNIKDIHLENFNISVGGRDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRYMALHAIDGIPRNCQILHVEQEVVGDDISALQCVLDSDIERTRLLEEEVRLHAQQRDLDFEDAT 282

[Close]

BLAST of HO067299 vs. TrEMBL
Match: Q6K7R4_ORYSJ (Putative ABC transporter OS=Oryza sativa subsp. japonica GN=P0452F04.18-1 PE=4 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.413e-60
Identity = 116/182 (63.74%), Postives = 140/182 (76.92%), Query Frame = -3

Query:   16 VRMNEGLDDGEAPKKKPEPVDGPLLSXXXXXXXXXXXXXXXXXXEAKFQLHLAEMEAVRAGMPVACVKHEGGGGHTVKDIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQLLAKQRESE 561
            +RMNEG+DD  APKK+ +  DGPLLS                  EA++Q H+AEMEA+RAGMP   V H   GG  V+DIHM+NF+++VGG DLI D +VTL+FGRHYGLVGRNGTGKT+FLR MAMHAIDGIP+NCQILHVEQEVVGDDT+ALQCVLN DIER QL++EEA L+ +Q++ E
Sbjct:  103 LRMNEGMDDKVAPKKQADVFDGPLLSSRDKAKIERKKRKDERQREAQYQTHVAEMEALRAGMPPVFVNHNNSGGPAVRDIHMENFSVTVGGRDLIQDCTVTLAFGRHYGLVGRNGTGKTSFLRAMAMHAIDGIPKNCQILHVEQEVVGDDTTALQCVLNADIERVQLLQEEAHLVQRQKDLE 284

[Close]

BLAST of HO067299 vs. TrEMBL
Match: B9F4M2_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_08959 PE=4 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.413e-60
Identity = 116/182 (63.74%), Postives = 140/182 (76.92%), Query Frame = -3

Query:   16 VRMNEGLDDGEAPKKKPEPVDGPLLSXXXXXXXXXXXXXXXXXXEAKFQLHLAEMEAVRAGMPVACVKHEGGGGHTVKDIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQLLAKQRESE 561
            +RMNEG+DD  APKK+ +  DGPLLS                  EA++Q H+AEMEA+RAGMP   V H   GG  V+DIHM+NF+++VGG DLI D +VTL+FGRHYGLVGRNGTGKT+FLR MAMHAIDGIP+NCQILHVEQEVVGDDT+ALQCVLN DIER QL++EEA L+ +Q++ E
Sbjct:  103 LRMNEGMDDKVAPKKQADVFDGPLLSSRDKAKIERKKRKDERQREAQYQTHVAEMEALRAGMPPVFVNHNNSGGPAVRDIHMENFSVTVGGRDLIQDCTVTLAFGRHYGLVGRNGTGKTSFLRAMAMHAIDGIPKNCQILHVEQEVVGDDTTALQCVLNADIERVQLLQEEAHLVQRQKDLE 284

[Close]

BLAST of HO067299 vs. TrEMBL
Match: C5XWM3_SORBI (Putative uncharacterized protein Sb04g037970 OS=Sorghum bicolor GN=Sb04g037970 PE=4 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.728e-58
Identity = 112/183 (61.20%), Postives = 140/183 (76.50%), Query Frame = -3

Query:   16 VRMNEGLDDGEAPKK-KPEPVDGPLLSXXXXXXXXXXXXXXXXXXEAKFQLHLAEMEAVRAGMPVACVKHEGGGGHTVKDIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQLLAKQRESE 561
            +RMN G+DD  APKK +PE  DGPLLS                  E ++Q H+AEMEA+RAGMP   V H   GG  V+DIHM+NF+++VGG DLI + ++TL+FGRHYGLVGRNGTGKT+FLR MA+HAIDGIP+NCQILHVEQEVVGDDT+ALQCVLN D+ER QL++EEA+L+ +Q++ E
Sbjct:  101 LRMNAGMDDDIAPKKPQPEVFDGPLLSSRDKAKIERRKRKEERQREVQYQTHVAEMEALRAGMPPVYVNHSNDGGPAVRDIHMENFSVTVGGRDLIQEATITLAFGRHYGLVGRNGTGKTSFLRAMALHAIDGIPKNCQILHVEQEVVGDDTTALQCVLNADVERVQLLQEEARLVQQQKDLE 283

[Close]

BLAST of HO067299 vs. TrEMBL
Match: B8AF60_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09528 PE=4 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.617e-56
Identity = 114/183 (62.30%), Postives = 135/183 (73.77%), Query Frame = -3

Query:   13 VRMNEGLDDGEAPKKKPEPVDGPLLSXXXXXXXXXXXXXXXXXXEAKFQLHLAEMEAVRAGMPVACVKHEGGGGHTVKDIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQLLAKQRESED 561
            +RMNEG+DD  APKK+ +  DGPLLS                  EA++Q H+AEMEA+RAGMP   V H   GG  V+DIHM+NF+++VGG DLI D +VTL+FGRHYGLVGRNGTGKT+FLR MAMHAIDGIP+NCQILHVEQEVVGDDT+ALQCVLN DIER  L E EA+      +S+D
Sbjct:  103 LRMNEGMDDKVAPKKQADVFDGPLLSSRDKAKIERKKRKDERQREAQYQTHVAEMEALRAGMPPVFVNHNNSGGPAVRDIHMENFSVTVGGRDLIQDCTVTLAFGRHYGLVGRNGTGKTSFLRAMAMHAIDGIPKNCQILHVEQEVVGDDTTALQCVLNADIERKDL-EYEAEFEQSVSKSKD 284

[Close]

BLAST of HO067299 vs. TrEMBL
Match: A9S4D8_PHYPA (ATP-binding cassette transporter, subfamily F, member 1 protein PpABCF1 OS=Physcomitrella patens subsp. patens GN=ppabcf1 PE=4 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.764e-46
Identity = 99/186 (53.23%), Postives = 120/186 (64.52%), Query Frame = -3

Query:    7 VRMNEGLDDGEAPKKKPEPVDGPLLSXXXXXXXXXXXXXXXXXXEAKFQLHLAEMEAVRAGMPVACVKHEG-GGGHTVKDIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQLLAKQRESEDST 561
            VRM++G+       K  +P   P +S                   A +Q H+A  EA   GMP   V H G G G   KDI M+NF+IS+GG +LI + +VTL+ GR YGLVGRNGTGKTT L+HMAMHAIDGIPRNCQILHVEQEVVGDDT+ LQCVL++D+ER  LMEEEAQL  ++     ST
Sbjct:  101 VRMSDGMAGSAPAAKLEDPQTLPEISERDLAKIERRRRKEERQRLADYQAHVAAAEAANVGMPAVMVNHGGVGEGAVAKDIRMENFSISMGGRELINEATVTLAHGRRYGLVGRNGTGKTTLLKHMAMHAIDGIPRNCQILHVEQEVVGDDTTVLQCVLDSDVERKLLMEEEAQLAQQKATVPTST 286

[Close]

BLAST of HO067299 vs. TAIR peptide
Match: AT1G64550.1 (| Symbols: ATGCN3, GCN3 | general control non-repressible 3 | chr1:23968850-23973369 FORWARD LENGTH=715)

HSP 1 Score: 263.077 bits (671), Expect = 8.140e-71
Identity = 127/185 (68.65%), Postives = 147/185 (79.46%), Query Frame = -3

Query:    7 VRMNEGLDDGEAPKKKPEPVDGPLLSXXXXXXXXXXXXXXXXXXEAKFQLHLAEMEAVRAGMPVACVKHEGGGGHTVKDIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQLLAKQRESEDST 561
            VRMN+G+DDG   KKKPEPVDGPLL+                  E ++Q H+AEMEA +AGMP   V H+ GGG  ++DIHMDNF +SVGG DLIVDGS+TLSFGRHYGLVGRNGTGKTTFLR+MAMHAI+GIP NCQILHVEQEVVGD T+ALQCVLNTDIER +L+EEE Q+LAKQRE+E+ T
Sbjct:   96 VRMNDGMDDGPVKKKKPEPVDGPLLTERDLAKIERRKKKDDRQRELQYQQHVAEMEAAKAGMPTVSVNHDTGGGSAIRDIHMDNFNVSVGGRDLIVDGSITLSFGRHYGLVGRNGTGKTTFLRYMAMHAIEGIPTNCQILHVEQEVVGDKTTALQCVLNTDIERTKLLEEEIQILAKQRETEEPT 280

[Close]

BLAST of HO067299 vs. TAIR peptide
Match: AT3G54540.1 (| Symbols: ATGCN4, GCN4 | general control non-repressible 4 | chr3:20190393-20192564 FORWARD LENGTH=723)

HSP 1 Score: 87.4261 bits (215), Expect = 6.121e-18
Identity = 47/107 (43.93%), Postives = 70/107 (65.42%), Query Frame = -3

Query:   13 VKDIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQLLAKQRESED 333
            VKDI +++F++S  G +L+ + SV +S G+ YGL+G NG GK+T L+ +A   I  +P+N  +L VEQEVVGD+ SAL  V++ + E  +L  EEA+ L K     D
Sbjct:  160 VKDITIESFSVSARGKELLKNASVRISHGKRYGLIGPNGMGKSTLLKLLAWRKIP-VPKNIDVLLVEQEVVGDEKSALNAVVSANEELVKL-REEAEALQKSSSGAD 264

[Close]

BLAST of HO067299 vs. TAIR peptide
Match: AT5G60790.1 (| Symbols: ATGCN1, GCN1 | ABC transporter family protein | chr5:24453760-24455767 REVERSE LENGTH=595)

HSP 1 Score: 75.8702 bits (185), Expect = 1.843e-14
Identity = 39/101 (38.61%), Postives = 64/101 (63.37%), Query Frame = -3

Query:   28 KDIHMDNFTISVGGHDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPRNCQILHVEQEVVGDDTSALQCVLNTDIERAQLMEEEAQLLAKQ 330
            +DI +++ +++  G+DLIVD  + L++GR YGL+G NG GK+T L  +    I  IP    I H+  E+   D S+L+ V++ D ER +L E+E ++L +Q
Sbjct:   67 RDIRIESLSVTFHGYDLIVDSMLELNYGRRYGLLGLNGCGKSTLLTAIGRREIP-IPDQMDIYHLSHEIEATDMSSLEAVVSCDEERLRL-EKEVEILVQQ 165

The following BLAST results are available for this feature:

BLAST of HO067299 vs. SwissProt
BLAST of HO067299 vs. TrEMBL
BLAST of HO067299 vs. TAIR peptide

BLAST of HO067299 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
AB3F_ARATH	7.767e-70	68.65	ABC transporter F family member 3 OS=Arabidopsis t...	[more]
GCN20_YEAST	2.291e-21	46.02	Protein GCN20 OS=Saccharomyces cerevisiae GN=GCN20...	[more]
ABCF3_HUMAN	7.371e-20	42.97	ATP-binding cassette sub-family F member 3 OS=Homo...	[more]
ABCF3_MOUSE	9.627e-20	43.20	ATP-binding cassette sub-family F member 3 OS=Mus ...	[more]
ABCF3_RAT	2.145e-19	42.97	ATP-binding cassette sub-family F member 3 OS=Ratt...	[more]
ABCF1_RAT	6.240e-19	45.28	ATP-binding cassette sub-family F member 1 OS=Ratt...	[more]
ABCF1_PIG	6.240e-19	45.28	ATP-binding cassette sub-family F member 1 OS=Sus ...	[more]
ABCF1_MOUSE	6.240e-19	45.28	ATP-binding cassette sub-family F member 1 OS=Mus ...	[more]
ABCF1_HUMAN	6.240e-19	45.28	ATP-binding cassette sub-family F member 1 OS=Homo...	[more]
ABCF3_PONAB	1.064e-18	42.52	ATP-binding cassette sub-family F member 3 OS=Pong...	[more]

BLAST of HO067299 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q8W1S2_SOYBN	9.436e-73	74.18	ABC transporter-like protein OS=Glycine max PE=2 S...	[more]
B9RYQ1_RICCO	2.175e-69	70.10	Putative uncharacterized protein OS=Ricinus commun...	[more]
D7KS83_ARALY	1.842e-68	68.65	ATGCN3 OS=Arabidopsis lyrata subsp. lyrata GN=ARAL...	[more]
D7TVM3_VITVI	7.737e-67	65.98	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9GL16_POPTR	5.015e-66	68.98	ABC transporter family protein OS=Populus trichoca...	[more]
Q6K7R4_ORYSJ	1.413e-60	63.74	Putative ABC transporter OS=Oryza sativa subsp. ja...	[more]
B9F4M2_ORYSJ	1.413e-60	63.74	Putative uncharacterized protein OS=Oryza sativa s...	[more]
C5XWM3_SORBI	1.728e-58	61.20	Putative uncharacterized protein Sb04g037970 OS=So...	[more]
B8AF60_ORYSI	1.617e-56	62.30	Putative uncharacterized protein OS=Oryza sativa s...	[more]
A9S4D8_PHYPA	5.764e-46	53.23	ATP-binding cassette transporter, subfamily F, mem...	[more]

BLAST of HO067299 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT1G64550.1	8.140e-71	68.65	\| Symbols: ATGCN3, GCN3 \| general control non-repr...	[more]
AT3G54540.1	6.121e-18	43.93	\| Symbols: ATGCN4, GCN4 \| general control non-repr...	[more]
AT5G60790.1	1.843e-14	38.61	\| Symbols: ATGCN1, GCN1 \| ABC transporter family p...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 34..54 score
None	No IPR available	GENE3D	3.40.50.300	no description	coord: 90..138 score: 5
None	No IPR available	PANTHER	PTHR19211	ATP-BINDING TRANSPORT PROTEIN-RELATED	coord: 90..187 score: 6.9
None	No IPR available	PANTHER	PTHR19211:SF1	gb def: Hypothetical protein (Fragment)	coord: 90..187 score: 6.9
None	No IPR available	SEG	seg	seg	coord: 38..56 score
None	No IPR available	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 93..137 score: 1.6
None	No IPR available	SEG	seg	seg	coord: 11..29 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO067299 ID=HO067299; Name=HO067299; organism=Cicer arietinum; type=EST; length=596bp
CGGGCAGGTACTGTCCTCAGATTCCCTCTGTTTGGCGAGTAATTGAGCTT
CTTCCTCCATAAGCTGAGCTCTCTCAATGTCAGTATTAAGAACACACTGC
AAGGCAGAGGTATCATCACCGACAACTTCTTGCTCAACGTGTAATATCTG
ACAGTTCCTGGGAATGCCATCTATGGCATGCATGGCCATGTGTCTCAGGA
AAGTTGTTTTACCCGTCCCGTTTCTACCAACAAGCCCATAATGTCTTCCA
AAAGAGAGTGTGACAGAACCATCAACAATGAGATCATGGCCACCAACAGA
GATAGTGAAATTATCCATGTGAATATCTTTCACGGTGTGTCCACCGCCGC
CCTCGTGCTTCACACACGCAACAGGCATGCCTGCTCGCACAGCTTCCATT
TCCGCCAAATGCAGTTGGAACTTTGCCTCTCTCTGGCGTTCGTCTTTCCT
TTTTCTCCTTTCGATCTTTAATTTGTCGCGTTCGGATAAGAGAGGACCGT
CTACAGGCTCAGGTTTTTTCTTGGGAGCTTCACCATCGTCCAAACCCTCG
TTCATACGAACGGCGTGGCGAGGCTTCGTACCTCGGCCGCGACCAC

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