GO660546

EST Overview
NameGO660546
Unique NameGO660546
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length220
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
[Close]
BLAST of GO660546 vs. TrEMBL
Match: Q8LGC7_ARATH (Armadillo/beta-catenin repeat family protein OS=Arabidopsis thaliana GN=At5g58680 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.939e-16
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 2 
Query:   98 DCNSDISCEFPTTTSESRQRKLFLSCAVDNSDDVIRNLITH 220
            DCNSDISCEFPTTTSESRQRKLFLSCAVDNSDDVIRNLITH
Sbjct:   28 DCNSDISCEFPTTTSESRQRKLFLSCAVDNSDDVIRNLITH 68
[Close]
BLAST of GO660546 vs. TrEMBL
Match: Q8GWD6_ARATH (Putative uncharacterized protein At5g58680/mzn1_130 OS=Arabidopsis thaliana GN=At5g58680/mzn1_130 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 2.939e-16
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 2 
Query:   98 DCNSDISCEFPTTTSESRQRKLFLSCAVDNSDDVIRNLITH 220
            DCNSDISCEFPTTTSESRQRKLFLSCAVDNSDDVIRNLITH
Sbjct:   28 DCNSDISCEFPTTTSESRQRKLFLSCAVDNSDDVIRNLITH 68
[Close]
BLAST of GO660546 vs. TrEMBL
Match: D7MQG4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_919073 PE=4 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.971e-12
Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 2 
Query:   98 DCNSDISCEFPTTTSESRQRKLFLSCAVDNSDDVIRNLITH 220
            DCNSD SC+FPTT+SESRQ KLFLSCAVDNSDD+IR LITH
Sbjct:   29 DCNSDRSCDFPTTSSESRQPKLFLSCAVDNSDDLIRCLITH 69
[Close]
BLAST of GO660546 vs. TAIR peptide
Match: AT5G58680.1 (| Symbols: | ARM repeat superfamily protein | chr5:23708247-23709320 REVERSE LENGTH=357)

HSP 1 Score: 88.1965 bits (217), Expect = 1.131e-18
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 2 
Query:   98 DCNSDISCEFPTTTSESRQRKLFLSCAVDNSDDVIRNLITH 220
            DCNSDISCEFPTTTSESRQRKLFLSCAVDNSDDVIRNLITH
Sbjct:   28 DCNSDISCEFPTTTSESRQRKLFLSCAVDNSDDVIRNLITH 68
[Close]
BLAST of GO660546 vs. TAIR peptide
Match: AT3G01400.1 (| Symbols: | ARM repeat superfamily protein | chr3:151920-152987 FORWARD LENGTH=355)

HSP 1 Score: 54.299 bits (129), Expect = 1.810e-8
Identity = 26/41 (63.41%), Postives = 33/41 (80.49%), Query Frame = 2 
Query:   98 DCNSDISCEFPTTTSESRQRKLFLSCAVDNSDDVIRNLITH 220
            DCNSD S EFPT +SESR  +L LSCA +NSDD+I +L++H
Sbjct:   32 DCNSDRSGEFPTASSESR--RLLLSCASENSDDLINHLVSH 70
The following BLAST results are available for this feature:
BLAST of GO660546 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
Q8LGC7_ARATH2.939e-16100.00Armadillo/beta-catenin repeat family protein OS=Ar... [more]
Q8GWD6_ARATH2.939e-16100.00Putative uncharacterized protein At5g58680/mzn1_13... [more]
D7MQG4_ARALY1.971e-1285.37Putative uncharacterized protein OS=Arabidopsis ly... [more]
back to top
BLAST of GO660546 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G58680.11.131e-18100.00| Symbols: | ARM repeat superfamily protein | chr... [more]
AT3G01400.11.810e-863.41| Symbols: | ARM repeat superfamily protein | chr... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 5..14
score
NoneNo IPR availableSEGsegsegcoord: 33..46
score: NAcoord: 59..68
score
NoneNo IPR availableSEGsegsegcoord: 15..35
score: NAcoord: 42..56
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GO660546 ID=GO660546; Name=GO660546; organism=Cicer arietinum; type=EST; length=220bp
ACTGCGTACCAATTCACCACCACCAGCGAAAGCCGCCAGCGCAAACTGTT
TTCTGCATACCCTGAAAACCAAACCGCTGAAAGAAGTGCTGATGCATGAT
TGCAACAGCGATATTAGCTGCGAATTTCCGACCACCACCAGCGAAAGCCG
CCAGCGCAAACTGTTTCTGAGCTGCGCGGTGGATAACAGCGATGATGTGA
TTCGCAACCTGATTACCCAT
back to top