GW691627

EST Overview


Name	GW691627
Unique Name	GW691627
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	648

Libraries


Library Name	Type
LIBEST_023772 Wilt resistant chickpea leave library (JG 315)	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GW691627 vs. SwissProt
Match: RBS3_PEA (Ribulose bisphosphate carboxylase small chain 3A, chloroplastic OS=Pisum sativum GN=RBCS-3A PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.020e-44
Identity = 81/93 (87.10%), Postives = 86/93 (92.47%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            EYLLRKGWVPCLEFELEKGFVYREHN SPGYYDGRYWTMWKLP+FG T+A QVLKEL EVV AYP AFVRIIGFDNVR+VQCISFIAHTP+ +
Sbjct:   88 EYLLRKGWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 180

[Close]

BLAST of GW691627 vs. SwissProt
Match: RBS2_PEA (Ribulose bisphosphate carboxylase small chain 3C, chloroplastic OS=Pisum sativum GN=RBCS-3C PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.020e-44
Identity = 81/93 (87.10%), Postives = 86/93 (92.47%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            EYLLRKGWVPCLEFELEKGFVYREHN SPGYYDGRYWTMWKLP+FG T+A QVLKEL EVV AYP AFVRIIGFDNVR+VQCISFIAHTP+ +
Sbjct:   88 EYLLRKGWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 180

[Close]

BLAST of GW691627 vs. SwissProt
Match: RBS_GLYTA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tabacina GN=RBCS PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.280e-43
Identity = 77/93 (82.80%), Postives = 84/93 (90.32%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            EYLLRKGW+PCLEFELE GFVYREH+ SPGYYDGRYWTMWKLP+FGCT+A QVLKELQE   AYPNAF+RIIGFDNVR+VQCISFIA+ P  F
Sbjct:   86 EYLLRKGWIPCLEFELEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNAFIRIIGFDNVRQVQCISFIAYKPPSF 178

[Close]

BLAST of GW691627 vs. SwissProt
Match: RBS1_SOYBN (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Glycine max GN=RBCS-1 PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.776e-42
Identity = 76/93 (81.72%), Postives = 82/93 (88.17%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            EYLLRKGW+PCLEFELE GFVYREHN SP YYDGRYWTMWKLP+FGCT+A QVLKELQE   AYPN F+RIIGFDNVR+VQCISFIA+ P  F
Sbjct:   86 EYLLRKGWIPCLEFELEHGFVYREHNRSPXYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPGF 178

[Close]

BLAST of GW691627 vs. SwissProt
Match: RBS4_SOYBN (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Glycine max GN=RBCS-4 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.626e-42
Identity = 76/93 (81.72%), Postives = 82/93 (88.17%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            EYLLRKGW+PCLEFELE GFVYREHN S GYYDGRYWTMWKLP+FGCT+A QVLKELQE   AYPN F+RIIGFDNVR+VQCISFIA+ P  F
Sbjct:   86 EYLLRKGWIPCLEFELEHGFVYREHNRSLGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPSF 178

[Close]

BLAST of GW691627 vs. SwissProt
Match: RBS_GLYTO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tomentella GN=RBCS PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 8.078e-42
Identity = 75/93 (80.65%), Postives = 83/93 (89.25%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            EYLLRKGW+PCLEFELE GFVYRE++ SPGYYDGRYWTMWKLP+FGCT+A QVLKELQE   AYPN F+RIIGFDNVR+VQCISFIA+ P  F
Sbjct:   86 EYLLRKGWIPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPVFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPSF 178

[Close]

BLAST of GW691627 vs. SwissProt
Match: RBS1_SOLLC (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum lycopersicum GN=RBCS-1 PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 8.931e-41
Identity = 73/93 (78.49%), Postives = 84/93 (90.32%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            EYLL+ GWVPCLEFE E+GFVYRE+N+SPGYYDGRYWTMWKLP+FGCT+A QVL E+QE  KAYP A+VRIIGFDNVR+VQCISFIA+ P+ F
Sbjct:   89 EYLLKNGWVPCLEFETERGFVYRENNSSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEGF 181

[Close]

BLAST of GW691627 vs. SwissProt
Match: RBS_CAPAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.523e-40
Identity = 72/91 (79.12%), Postives = 82/91 (90.11%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPK 274
            EYLL+KGWVPCLEFE E GFVYREH+ SPGYYDGRYWTMWKLP+FGCT+A QVL E+QE  KAYP A++RIIGFDNVR+VQCISFIA+ P+
Sbjct:   88 EYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPE 178

[Close]

BLAST of GW691627 vs. SwissProt
Match: RBS_MEDSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.990e-40
Identity = 71/93 (76.34%), Postives = 84/93 (90.32%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            EYL+RKGW+PCLEFELEKGFVYRE++ SPGYYDGRYWTMW+LPLFG T++ QVLKEL +    YP++F+RIIGFDNVR+VQCISFIAHTPK +
Sbjct:   88 EYLIRKGWIPCLEFELEKGFVYRENHRSPGYYDGRYWTMWRLPLFGATDSSQVLKELADCKAEYPDSFIRIIGFDNVRQVQCISFIAHTPKNY 180

[Close]

BLAST of GW691627 vs. SwissProt
Match: RBS_HEVBR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hevea brasiliensis GN=RBCS PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.990e-40
Identity = 72/91 (79.12%), Postives = 84/91 (92.31%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPK 274
            EYLLRKGWVPCLEFELE G VYRE++ SPGYYDGRYWTMWKLP+FGCT+AVQVL+EL E++KAYP+ + RIIGFDNVR+VQCISF+A+ PK
Sbjct:   90 EYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQVQCISFLAYKPK 180

[Close]

BLAST of GW691627 vs. TrEMBL
Match: Q9ZP07_CICAR (Ribulose bisphosphate carboxylase small chain OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.740e-50
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVR+VQCISFIAHTPKEF
Sbjct:   89 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQVQCISFIAHTPKEF 181

[Close]

BLAST of GW691627 vs. TrEMBL
Match: Q9ZRI4_PEA (Ribulose bisphosphate carboxylase small chain (Fragment) OS=Pisum sativum GN=RuBP PE=2 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 1.250e-42
Identity = 80/93 (86.02%), Postives = 85/93 (91.40%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            EYLLRK WVPCLEFELEKGFVYREHN SPGYYDGRYWTMWKLP+FG T+A QVLKEL EVV AYP AFVRIIGFDNVR+VQCISFIAHTP+ +
Sbjct:   47 EYLLRKPWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 139

[Close]

BLAST of GW691627 vs. TrEMBL
Match: Q9FUJ5_SOYBN (Ribulose bisphosphate carboxylase small chain OS=Glycine max PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.206e-42
Identity = 77/93 (82.80%), Postives = 83/93 (89.25%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            EYLLRKGW+PCLEFELE GFVYREHN SPGYYDGRYWTMWKLP+FGCT+A QVLKELQE   AYPN F+RIIGFDNVR+VQCISFIA+ P  F
Sbjct:   86 EYLLRKGWIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPGF 178

[Close]

BLAST of GW691627 vs. TrEMBL
Match: Q39832_SOYBN (Ribulose bisphosphate carboxylase small chain OS=Glycine max PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.206e-42
Identity = 77/93 (82.80%), Postives = 83/93 (89.25%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            EYLLRKGW+PCLEFELE GFVYREHN SPGYYDGRYWTMWKLP+FGCT+A QVLKELQE   AYPN F+RIIGFDNVR+VQCISFIA+ P  F
Sbjct:   86 EYLLRKGWIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPGF 178

[Close]

BLAST of GW691627 vs. TrEMBL
Match: C6T1Y2_SOYBN (Ribulose bisphosphate carboxylase small chain OS=Glycine max PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.206e-42
Identity = 77/93 (82.80%), Postives = 83/93 (89.25%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            EYLLRKGW+PCLEFELE GFVYREHN SPGYYDGRYWTMWKLP+FGCT+A QVLKELQE   AYPN F+RIIGFDNVR+VQCISFIA+ P  F
Sbjct:   86 EYLLRKGWIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPGF 178

[Close]

BLAST of GW691627 vs. TrEMBL
Match: C6SVL2_SOYBN (Ribulose bisphosphate carboxylase small chain OS=Glycine max PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.206e-42
Identity = 77/93 (82.80%), Postives = 83/93 (89.25%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            EYLLRKGW+PCLEFELE GFVYREHN SPGYYDGRYWTMWKLP+FGCT+A QVLKELQE   AYPN F+RIIGFDNVR+VQCISFIA+ P  F
Sbjct:   86 EYLLRKGWIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPGF 178

[Close]

BLAST of GW691627 vs. TrEMBL
Match: B9T1N0_RICCO (Ribulose bisphosphate carboxylase small chain OS=Ricinus communis GN=RCOM_1158790 PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.059e-41
Identity = 77/93 (82.80%), Postives = 85/93 (91.40%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            EYLLRKGWVPCLEFELE GFVYRE+  SPGYYDGRYWTMWKLP+FGC++AVQVLKEL E +KAYPN+FVRIIGFDNVR+VQCISFIA+ P  F
Sbjct:   90 EYLLRKGWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCSDAVQVLKELDEAIKAYPNSFVRIIGFDNVRQVQCISFIAYKPPSF 182

[Close]

BLAST of GW691627 vs. TrEMBL
Match: Q9FUJ4_SOYBN (Ribulose bisphosphate carboxylase small chain OS=Glycine max PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.382e-41
Identity = 76/90 (84.44%), Postives = 82/90 (91.11%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTP 271
            EYLLRKGW+PCLEFELE GFVYREHN SPGYYDGRYWTMWKLP+FGCT+A QVLKELQE   AYPN F+RIIGFDNVR+VQCISFIA+ P
Sbjct:   86 EYLLRKGWIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKP 175

[Close]

BLAST of GW691627 vs. TrEMBL
Match: B7FMC2_MEDTR (Ribulose bisphosphate carboxylase small chain OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.080e-41
Identity = 78/93 (83.87%), Postives = 86/93 (92.47%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            EYL+RKGWV CLEFE EKGFVYRE+++SPGYYDGRYWTMWKLPLFG T+A QVLKEL EVV AYPNAFVRIIGFDNVR+VQCISFIAHTP+ +
Sbjct:   89 EYLIRKGWVACLEFETEKGFVYRENHSSPGYYDGRYWTMWKLPLFGATDASQVLKELDEVVVAYPNAFVRIIGFDNVRQVQCISFIAHTPEVY 181

[Close]

BLAST of GW691627 vs. TrEMBL
Match: Q42815_GLYSO (Ribulose bisphosphate carboxylase small chain OS=Glycine soja GN=rbcS PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.022e-41
Identity = 76/93 (81.72%), Postives = 82/93 (88.17%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            EYLLRKGW+PCLEFELE GFVYREHN SPGYYDGR WTMWKLP+FGCT+A QVLKELQE   AYPN F+RIIGFDNVR+VQCISFIA+ P  F
Sbjct:   86 EYLLRKGWIPCLEFELEHGFVYREHNRSPGYYDGRCWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPSF 178

[Close]

BLAST of GW691627 vs. TAIR peptide
Match: AT1G67090.1 (| Symbols: RBCS1A | ribulose bisphosphate carboxylase small chain 1A | chr1:25048465-25049249 REVERSE LENGTH=180)

HSP 1 Score: 165.236 bits (417), Expect = 2.660e-41
Identity = 70/93 (75.27%), Postives = 81/93 (87.10%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            +YL+R  W+PC+EFELE GFVYREH NSPGYYDGRYWTMWKLPLFGCT++ QVLKE++E  K YPNAF+RIIGFDN R+VQCISFIA+ P  F
Sbjct:   86 DYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPPSF 178

[Close]

BLAST of GW691627 vs. TAIR peptide
Match: AT5G38410.1 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=181)

HSP 1 Score: 162.54 bits (410), Expect = 1.724e-40
Identity = 69/93 (74.19%), Postives = 80/93 (86.02%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            +YLLR  W+PC+EFELE GFVYREH N+PGYYDGRYWTMWKLPLFGCT++ QVLKE++E  K YP AF+RIIGFDN R+VQCISFIA+ P  F
Sbjct:   86 DYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 178

[Close]

BLAST of GW691627 vs. TAIR peptide
Match: AT5G38420.1 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15381203-15381978 REVERSE LENGTH=181)

HSP 1 Score: 162.54 bits (410), Expect = 1.724e-40
Identity = 69/93 (74.19%), Postives = 80/93 (86.02%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            +YLLR  W+PC+EFELE GFVYREH N+PGYYDGRYWTMWKLPLFGCT++ QVLKE++E  K YP AF+RIIGFDN R+VQCISFIA+ P  F
Sbjct:   86 DYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 178

[Close]

BLAST of GW691627 vs. TAIR peptide
Match: AT5G38430.1 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15384350-15385155 REVERSE LENGTH=181)

HSP 1 Score: 162.54 bits (410), Expect = 1.724e-40
Identity = 69/93 (74.19%), Postives = 80/93 (86.02%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            +YLLR  W+PC+EFELE GFVYREH N+PGYYDGRYWTMWKLPLFGCT++ QVLKE++E  K YP AF+RIIGFDN R+VQCISFIA+ P  F
Sbjct:   86 DYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 178

[Close]

BLAST of GW691627 vs. TAIR peptide
Match: AT5G38410.3 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=186)

HSP 1 Score: 156.377 bits (394), Expect = 1.236e-38
Identity = 69/98 (70.41%), Postives = 80/98 (81.63%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELE-----KGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            +YLLR  W+PC+EFELE      GFVYREH N+PGYYDGRYWTMWKLPLFGCT++ QVLKE++E  K YP AF+RIIGFDN R+VQCISFIA+ P  F
Sbjct:   86 DYLLRNKWIPCVEFELEVINTKHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 183

[Close]

BLAST of GW691627 vs. TAIR peptide
Match: AT5G38410.2 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=174)

HSP 1 Score: 143.28 bits (360), Expect = 1.083e-34
Identity = 63/93 (67.74%), Postives = 74/93 (79.57%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELEKGFVYREHNNSPGYYDGRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRRVQCISFIAHTPKEF 280
            +YLLR  W+PC+EFELE       H N+PGYYDGRYWTMWKLPLFGCT++ QVLKE++E  K YP AF+RIIGFDN R+VQCISFIA+ P  F
Sbjct:   86 DYLLRNKWIPCVEFELE-------HGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 171

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BLAST of GW691627 vs. TAIR peptide
Match: AT1G67090.2 (| Symbols: RBCS1A | ribulose bisphosphate carboxylase small chain 1A | chr1:25048590-25049249 REVERSE LENGTH=136)

HSP 1 Score: 58.151 bits (139), Expect = 1.007e-11
Identity = 26/35 (74.29%), Postives = 27/35 (77.14%), Query Frame = 3

Query:   57 DLCTVSTTTHQDTMMEGTGQCGSFHCLVALRLFKC 161
            DLCTVST TH DTMM+GTGQCGSF C VA    KC
Sbjct:  102 DLCTVSTVTHPDTMMDGTGQCGSFPCSVAPTPLKC 136

HSP 2 Score: 28.8758 bits (63), Expect = 1.007e-11
Identity = 8/17 (47.06%), Postives = 14/17 (82.35%), Query Frame = 2

Query:    2 EYLLRKGWVPCLEFELE 52
            +YL+R  W+PC+EF+ +
Sbjct:   86 DYLIRNKWIPCVEFDTD 102

The following BLAST results are available for this feature:

BLAST of GW691627 vs. SwissProt
BLAST of GW691627 vs. TrEMBL
BLAST of GW691627 vs. TAIR peptide

BLAST of GW691627 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RBS3_PEA	1.020e-44	87.10	Ribulose bisphosphate carboxylase small chain 3A, ...	[more]
RBS2_PEA	1.020e-44	87.10	Ribulose bisphosphate carboxylase small chain 3C, ...	[more]
RBS_GLYTA	3.280e-43	82.80	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS1_SOYBN	2.776e-42	81.72	Ribulose bisphosphate carboxylase small chain 1, c...	[more]
RBS4_SOYBN	3.626e-42	81.72	Ribulose bisphosphate carboxylase small chain 4, c...	[more]
RBS_GLYTO	8.078e-42	80.65	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS1_SOLLC	8.931e-41	78.49	Ribulose bisphosphate carboxylase small chain 1, c...	[more]
RBS_CAPAN	1.523e-40	79.12	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS_MEDSA	1.990e-40	76.34	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS_HEVBR	1.990e-40	79.12	Ribulose bisphosphate carboxylase small chain, chl...	[more]

BLAST of GW691627 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q9ZP07_CICAR	4.740e-50	98.92	Ribulose bisphosphate carboxylase small chain OS=C...	[more]
Q9ZRI4_PEA	1.250e-42	86.02	Ribulose bisphosphate carboxylase small chain (Fra...	[more]
Q9FUJ5_SOYBN	6.206e-42	82.80	Ribulose bisphosphate carboxylase small chain OS=G...	[more]
Q39832_SOYBN	6.206e-42	82.80	Ribulose bisphosphate carboxylase small chain OS=G...	[more]
C6T1Y2_SOYBN	6.206e-42	82.80	Ribulose bisphosphate carboxylase small chain OS=G...	[more]
C6SVL2_SOYBN	6.206e-42	82.80	Ribulose bisphosphate carboxylase small chain OS=G...	[more]
B9T1N0_RICCO	1.059e-41	82.80	Ribulose bisphosphate carboxylase small chain OS=R...	[more]
Q9FUJ4_SOYBN	1.382e-41	84.44	Ribulose bisphosphate carboxylase small chain OS=G...	[more]
B7FMC2_MEDTR	3.080e-41	83.87	Ribulose bisphosphate carboxylase small chain OS=M...	[more]
Q42815_GLYSO	4.022e-41	81.72	Ribulose bisphosphate carboxylase small chain OS=G...	[more]

BLAST of GW691627 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 7


Match Name	E-value	Identity	Description
AT1G67090.1	2.660e-41	75.27	\| Symbols: RBCS1A \| ribulose bisphosphate carboxyl...	[more]
AT5G38410.1	1.724e-40	74.19	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]
AT5G38420.1	1.724e-40	74.19	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]
AT5G38430.1	1.724e-40	74.19	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]
AT5G38410.3	1.236e-38	70.41	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]
AT5G38410.2	1.083e-34	67.74	\| Symbols: \| Ribulose bisphosphate carboxylase (s...	[more]
AT1G67090.2	1.007e-11	74.29	\| Symbols: RBCS1A \| ribulose bisphosphate carboxyl...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000894	Ribulose bisphosphate carboxylase, small chain	PRINTS	PR00152	RUBISCOSMALL	coord: 8..23 score: 1.5e-35coord: 30..59 score: 1.5e-35coord: 64..90 score: 1.5
IPR000894	Ribulose bisphosphate carboxylase, small chain	GENE3D	3.30.190.10	no description	coord: 1..92 score: 5
IPR000894	Ribulose bisphosphate carboxylase, small chain	PFAM	PF00101	RuBisCO_small	coord: 1..90 score: 3.1
IPR000894	Ribulose bisphosphate carboxylase, small chain	SMART	SM00961	no description	coord: 1..90 score: 1.2
IPR000894	Ribulose bisphosphate carboxylase, small chain	SUPERFAMILY	55239	RuBisCO, small subunit	coord: 1..93 score: 1.5

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GW691627 ID=GW691627; Name=GW691627; organism=Cicer arietinum; type=EST; length=648bp
TGAATACCTTCTAAGGAAGGGATGGGTTCCTTGCTTGGAATTTGAGTTGG
AGAAAGGATTTGTGTACCGTGAGCACAACAACTCACCAGGATACTATGAT
GGAAGGTACTGGACAATGTGGAAGCTTCCATTGTTTGGTTGCACTGAGGC
TGTTCAAGTGTTGAAGGAACTTCAGGAAGTTGTCAAGGCTTACCCTAATG
CTTTCGTCCGCATCATCGGATTCGACAACGTTCGCCGAGTGCAGTGCATC
AGTTTCATTGCACACACACCTAAAGAGTTCTAAGTTTGAGTATTAACTCT
CTCGTGAGAATCATTTATGTTTCTCCCAGTTGTTATGCTTGTAATCTCCT
TTTCTTCTTCATCGGAATGTCTTCCTTTGTTTCTTCGGTTTTTGACTTTC
AGACATCAAATGCAACTGTATGGATTAGAGTTATAAATGAAATGGTGCTT
CTATTCATTCTATCTATGTTGGATATGATTAAAATGTCAGTATCGCAGTG
ATTGTACGACTGCCTTACTTCTGTTAGAAAACTACGCATCATGTTCGTAC
TGCTGAGAAATCCATGTTCTTTATAAAGTTCTCTCGGGTAAATCCATGCT
TACTACTCAGAAATCTACATATCCGCTGCTGGAGAACAGTATTTTAAA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Biological Process**
Term	Definition
GO:0015977	carbon fixation

Vocabulary: **Molecular Function**
Term	Definition
GO:0016984	ribulose-bisphosphate carboxylase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR024681	RuBisCO_ssu

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