HO067287

EST Overview


Name	HO067287
Unique Name	HO067287
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	356

Libraries


Library Name	Type
LIBEST_026414 Chickpea drought stressed cDNA SSH library BULK1	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of HO067287 vs. SwissProt
Match: CAF1I_ARATH (Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana GN=CAF1-9 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.301e-18
Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = -3

Query:   10 VLTRSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLG 267
            V+TR VW+ NL+ EF+LI  +ID +P ISMDTEFPGVI +    D  F +    LY +LKANVD L LIQ+G TLSD  GNLP LG
Sbjct:   17 VVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFK---SDLRFTNPDD-LYTLLKANVDALSLIQVGLTLSDVNGNLPDLG 98

[Close]

BLAST of HO067287 vs. SwissProt
Match: CAF1K_ARATH (Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana GN=CAF1-11 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.898e-18
Identity = 47/91 (51.65%), Postives = 62/91 (68.13%), Query Frame = -3

Query:   10 VLTRSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPD-----SGDPSFRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLG 267
            ++ R VW+ NL+ EF LIR +++ +P ISMDTEFPGVI + D      G+P++      LY +LK+NVD L LIQ+G TLSD  GNLP LG
Sbjct:   12 IVIRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLDVLRRGNPNY------LYNLLKSNVDALSLIQVGLTLSDADGNLPDLG 96

[Close]

BLAST of HO067287 vs. SwissProt
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.101e-17
Identity = 44/87 (50.57%), Postives = 57/87 (65.52%), Query Frame = -3

Query:    7 VLTRSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLGT 267
            ++ R VW  NL  EF LIR ++D F  I+MDTEFPGV+++P +   +F++     Y  LK NVD L LIQ+G T SD  GNLPT GT
Sbjct:   10 IMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVA---TFKYNNDLNYRTLKENVDLLKLIQVGLTFSDENGNLPTCGT 93

[Close]

BLAST of HO067287 vs. SwissProt
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 3.204e-17
Identity = 42/84 (50.00%), Postives = 55/84 (65.48%), Query Frame = -3

Query:    7 RSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLGT 258
            R VW+ NL+ E  LIR ++D FP ++MDTEFPG++ RP     +F+      Y  LK NV+ L +IQ+G T SD KGNLPT GT
Sbjct:   13 REVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVG---TFKTNTEYHYETLKTNVNILKMIQLGLTFSDEKGNLPTCGT 93

[Close]

BLAST of HO067287 vs. SwissProt
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.590e-16
Identity = 41/84 (48.81%), Postives = 55/84 (65.48%), Query Frame = -3

Query:    7 RSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLGT 258
            R VW+ NL  E  LIR ++D FP ++MDTEFPG++VRP     +F+      Y  LK NV+ L +IQ+G T S+ +GNLPT GT
Sbjct:   13 REVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVG---TFKSNADYHYETLKTNVNILKMIQLGLTFSNEQGNLPTCGT 93

[Close]

BLAST of HO067287 vs. SwissProt
Match: CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.543e-16
Identity = 43/87 (49.43%), Postives = 56/87 (64.37%), Query Frame = -3

Query:    7 RSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPS---FRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLGT 258
            R VW+ NL+ E  LI   ID FP ++MDTEFPG++ +  + +P+   +       Y  LKANV+ L LIQ+G TLSD KGNLPT GT
Sbjct:   17 REVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTLKANVNMLKLIQLGLTLSDEKGNLPTCGT 103

[Close]

BLAST of HO067287 vs. SwissProt
Match: CAF1_SCHPO (Poly(A) ribonuclease pop2 OS=Schizosaccharomyces pombe GN=caf1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.999e-15
Identity = 42/80 (52.50%), Postives = 52/80 (65.00%), Query Frame = -3

Query:   19 RSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLP 258
            R VWS+NL  E  LI SLI+ +P++SMDTEFPGV+ RP      F+      Y  L+ANVD L +IQIG  LSD +GN P
Sbjct:   23 RDVWSTNLQQEMNLIMSLIERYPVVSMDTEFPGVVARPLG---VFKSSDDYHYQTLRANVDSLKIIQIGLALSDEEGNAP 99

[Close]

BLAST of HO067287 vs. SwissProt
Match: CNOT8_MOUSE (CCR4-NOT transcription complex subunit 8 OS=Mus musculus GN=Cnot8 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.104e-12
Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = -3

Query:   16 LPLSPRSNGPVLTRSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPT 297
            +P +   N  V+   VW+SNL+ E + IR ++ S+  I+MDTEFPGV+VRP      FR      Y +L+ NVD L +IQ+G T ++ KG  P+
Sbjct:    1 MPAALVENSQVICE-VWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIG---EFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYPS 90

[Close]

BLAST of HO067287 vs. SwissProt
Match: CNOT8_HUMAN (CCR4-NOT transcription complex subunit 8 OS=Homo sapiens GN=CNOT8 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.104e-12
Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = -3

Query:   16 LPLSPRSNGPVLTRSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPT 297
            +P +   N  V+   VW+SNL+ E + IR ++ S+  I+MDTEFPGV+VRP      FR      Y +L+ NVD L +IQ+G T ++ KG  P+
Sbjct:    1 MPAALVENSQVICE-VWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIG---EFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYPS 90

[Close]

BLAST of HO067287 vs. SwissProt
Match: POP2_YEAST (Poly(A) ribonuclease POP2 OS=Saccharomyces cerevisiae GN=POP2 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.179e-11
Identity = 44/112 (39.29%), Postives = 61/112 (54.46%), Query Frame = -3

Query:   10 KPLAEPLP--LSPRSNGPVL--------TRSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLG 315
            +PLA  LP  L+ +S  P+          R VW SNL  EF +IR L+  +  +S+ TEF G + RP     +FR +    Y  ++ANVD L+ IQ+G +LSD  GN P  G
Sbjct:  132 RPLASQLPKHLTNQSMPPIFLPPPNYLFVRDVWKSNLYSEFAVIRQLVSQYNHVSISTEFVGTLARPIG---TFRSKVDYHYQTMRANVDFLNPIQLGLSLSDANGNKPDNG 240

[Close]

BLAST of HO067287 vs. TrEMBL
Match: B9HBR3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_866102 PE=4 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.012e-24
Identity = 61/105 (58.10%), Postives = 74/105 (70.48%), Query Frame = -3

Query:   10 NRKPLAEPLPLSPRSNGPVLTRSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFRHRG-ACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLG 321
            ++ P  +P P  P+    VL RSVW+ NL+ EFK IRS ID +PLISMDTEFPG++VRP +GDP  RHR     Y  LKANVD L+LIQIG T++D  GNLP LG
Sbjct:    5 DKPPPPQPPPPRPQLARTVLIRSVWADNLEEEFKFIRSEIDRYPLISMDTEFPGIVVRPVAGDPYNRHRDPTAHYLSLKANVDLLNLIQIGLTIADEDGNLPDLG 109

[Close]

BLAST of HO067287 vs. TrEMBL
Match: B9IIP4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_777368 PE=4 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.908e-23
Identity = 58/93 (62.37%), Postives = 69/93 (74.19%), Query Frame = -3

Query:   10 PRSNGPVLTRSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFRHRG-ACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLG 285
            P+    V+ RSVW+ NL+ EFKLIRS ID +PLISMDTEFPG++VRP +GDP  RH G    Y  LKANVD L+LIQIG T++D  GNLP LG
Sbjct:    9 PQRAKTVVIRSVWADNLEEEFKLIRSEIDRYPLISMDTEFPGIVVRPAAGDPYNRHSGPRAHYLSLKANVDLLNLIQIGLTIADEDGNLPDLG 101

[Close]

BLAST of HO067287 vs. TrEMBL
Match: A5BKL7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021407 PE=4 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.250e-23
Identity = 60/94 (63.83%), Postives = 68/94 (72.34%), Query Frame = -3

Query:    7 PRSNGPVLTRSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPS-FRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLGT 285
            PR++ PV  R VWSSNLD EFKLI S+ID FP +SMDTEFPGVIVR  SG P   +   A  Y +LKANVD L+LIQIG T+SD  GNLP  GT
Sbjct:    7 PRTSAPVXVRGVWSSNLDHEFKLISSVIDLFPFVSMDTEFPGVIVRSLSGLPDPPQSPSAVNYVLLKANVDVLNLIQIGLTISDADGNLPDFGT 100

[Close]

BLAST of HO067287 vs. TrEMBL
Match: B9SVZ3_RICCO (Ccr4-associated factor, putative OS=Ricinus communis GN=RCOM_0225810 PE=4 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.249e-23
Identity = 58/99 (58.59%), Postives = 72/99 (72.73%), Query Frame = -3

Query:    7 PLPLSPRSNGPVLTRSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFRHRG-ACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLGT 300
            P PL P     V  RSVW+ N++ EF LIRS+ID +PLISMDTEFPG++VRPD+ DP  R+R     Y  LKANVD L+LIQ+G TL++ +GNLP LGT
Sbjct:    7 PPPLPPS----VQVRSVWADNIESEFSLIRSIIDRYPLISMDTEFPGIVVRPDAEDPYNRYRDPKSHYMNLKANVDMLNLIQVGLTLANEEGNLPDLGT 101

[Close]

BLAST of HO067287 vs. TrEMBL
Match: C6TD00_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.786e-21
Identity = 54/95 (56.84%), Postives = 69/95 (72.63%), Query Frame = -3

Query:    7 SPRSNGPVLTRSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFRHRGACL-YAVLKANVDRLHLIQIGPTLSDHKGNLPTLGT 288
            +P  +  +L R VW+SNL+ EF+LIR +ID +PLISMDTEFPGV+ RP + DP+  +    + Y  LK+NVD L+LIQIG TLSD  GNLP LGT
Sbjct:   33 NPNHSKTILIREVWASNLESEFQLIRQVIDDYPLISMDTEFPGVVFRPHTVDPTKPYLPPSVHYRFLKSNVDALNLIQIGLTLSDSNGNLPHLGT 127

[Close]

BLAST of HO067287 vs. TrEMBL
Match: B9SCZ3_RICCO (Ccr4-associated factor, putative OS=Ricinus communis GN=RCOM_1282470 PE=4 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.157e-20
Identity = 52/95 (54.74%), Postives = 67/95 (70.53%), Query Frame = -3

Query:    7 LSPRSNGPVLTRSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLGT 291
            +S   N PV+ R VWS NL+ EF+LIR LID FP+ISMDTEFPG++ +    +P    R +  Y +LK+NVD L+LIQ+G TLSD +GNLP L T
Sbjct:   10 VSSNHNKPVIIRDVWSHNLESEFQLIRDLIDDFPIISMDTEFPGLVFK----NPHHSRRPSDHYTLLKSNVDALNLIQVGLTLSDSRGNLPDLAT 100

[Close]

BLAST of HO067287 vs. TrEMBL
Match: A5BID5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015622 PE=4 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.744e-20
Identity = 51/87 (58.62%), Postives = 61/87 (70.11%), Query Frame = -3

Query:    7 LTRSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFR-HRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLGT 264
            + R VW+ NL+ EF+LI  LID +P ISMDTEFPGV+ RP  G+  FR  R +  Y  LK+NVD L LIQ+G TLSD  GNLP LGT
Sbjct:    1 MIREVWAENLESEFELISDLIDQYPFISMDTEFPGVVFRPSGGEQQFRLRRPSDHYRFLKSNVDALCLIQVGLTLSDANGNLPDLGT 87

[Close]

BLAST of HO067287 vs. TrEMBL
Match: B9MYV0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_679906 PE=4 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.183e-19
Identity = 51/92 (55.43%), Postives = 65/92 (70.65%), Query Frame = -3

Query:    7 VLTRSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFRH-----RGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLGT 267
            ++ R VWS NL+ EF+LIR LID FP ISMDTEFPGV+ RP     + R+     + +  Y +LK+NVD L+LIQ+G TLSD +GNLP LGT
Sbjct:    7 IVIREVWSCNLESEFELIRDLIDEFPFISMDTEFPGVVFRPPVDPTNNRNYFRQLKPSDHYKILKSNVDALNLIQVGLTLSDAEGNLPDLGT 98

[Close]

BLAST of HO067287 vs. TrEMBL
Match: B8LFH5_IPOBA (CCR4-associated factor OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.183e-19
Identity = 51/91 (56.04%), Postives = 64/91 (70.33%), Query Frame = -3

Query:    7 PVLTRSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDS---GDPSFRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLGT 270
            P+  R VW+ NL+ EF+LI  LID +P ISMDTEFPGV+ +P+S   G  S   R A  Y +LK+NVD L+LIQ+G TLSD  GNLP LG+
Sbjct:   12 PIRIREVWADNLESEFQLISYLIDDYPYISMDTEFPGVVFKPESRRRGPLSAPDRSADSYRLLKSNVDALNLIQLGLTLSDASGNLPVLGS 102

[Close]

BLAST of HO067287 vs. TrEMBL
Match: D7LNQ2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_484842 PE=4 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.848e-18
Identity = 51/86 (59.30%), Postives = 61/86 (70.93%), Query Frame = -3

Query:   10 VLTRSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLG 267
            V+TR VW+ NL+ EF+LI  +ID FP ISMDTEFPGVI + D    +     A LY++LKANVD L LIQ+G TLSD  GNLP LG
Sbjct:   18 VVTREVWAENLESEFELISEIIDDFPFISMDTEFPGVIFKSDLRFTN----PADLYSLLKANVDALSLIQVGLTLSDANGNLPDLG 99

[Close]

BLAST of HO067287 vs. TAIR peptide
Match: AT3G44260.1 (| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr3:15952213-15953055 REVERSE LENGTH=280)

HSP 1 Score: 91.6633 bits (226), Expect = 1.002e-19
Identity = 50/86 (58.14%), Postives = 60/86 (69.77%), Query Frame = -3

Query:   10 VLTRSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLG 267
            V+TR VW+ NL+ EF+LI  +ID +P ISMDTEFPGVI +    D  F +    LY +LKANVD L LIQ+G TLSD  GNLP LG
Sbjct:   17 VVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFK---SDLRFTNPDD-LYTLLKANVDALSLIQVGLTLSDVNGNLPDLG 98

[Close]

BLAST of HO067287 vs. TAIR peptide
Match: AT5G22250.1 (| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr5:7365605-7366441 REVERSE LENGTH=278)

HSP 1 Score: 90.5077 bits (223), Expect = 2.232e-19
Identity = 47/91 (51.65%), Postives = 62/91 (68.13%), Query Frame = -3

Query:   10 VLTRSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPD-----SGDPSFRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLG 267
            ++ R VW+ NL+ EF LIR +++ +P ISMDTEFPGVI + D      G+P++      LY +LK+NVD L LIQ+G TLSD  GNLP LG
Sbjct:   12 IVIRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLDVLRRGNPNY------LYNLLKSNVDALSLIQVGLTLSDADGNLPDLG 96

[Close]

BLAST of HO067287 vs. TAIR peptide
Match: AT5G10960.1 (| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr5:3464581-3465414 FORWARD LENGTH=277)

HSP 1 Score: 88.5817 bits (218), Expect = 8.481e-19
Identity = 44/87 (50.57%), Postives = 57/87 (65.52%), Query Frame = -3

Query:    7 VLTRSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLGT 267
            ++ R VW  NL  EF LIR ++D F  I+MDTEFPGV+++P +   +F++     Y  LK NVD L LIQ+G T SD  GNLPT GT
Sbjct:   10 IMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVA---TFKYNNDLNYRTLKENVDLLKLIQVGLTFSDENGNLPTCGT 93

[Close]

BLAST of HO067287 vs. TAIR peptide
Match: AT2G32070.1 (| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr2:13640829-13641656 REVERSE LENGTH=275)

HSP 1 Score: 87.0409 bits (214), Expect = 2.467e-18
Identity = 42/84 (50.00%), Postives = 55/84 (65.48%), Query Frame = -3

Query:    7 RSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLGT 258
            R VW+ NL+ E  LIR ++D FP ++MDTEFPG++ RP     +F+      Y  LK NV+ L +IQ+G T SD KGNLPT GT
Sbjct:   13 REVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVG---TFKTNTEYHYETLKTNVNILKMIQLGLTFSDEKGNLPTCGT 93

[Close]

BLAST of HO067287 vs. TAIR peptide
Match: AT1G80780.3 (| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr1:30358517-30359583 FORWARD LENGTH=286)

HSP 1 Score: 84.7297 bits (208), Expect = 1.225e-17
Identity = 41/84 (48.81%), Postives = 55/84 (65.48%), Query Frame = -3

Query:    7 RSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLGT 258
            R VW+ NL  E  LIR ++D FP ++MDTEFPG++VRP     +F+      Y  LK NV+ L +IQ+G T S+ +GNLPT GT
Sbjct:   13 REVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVG---TFKSNADYHYETLKTNVNILKMIQLGLTFSNEQGNLPTCGT 93

[Close]

BLAST of HO067287 vs. TAIR peptide
Match: AT1G80780.2 (| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr1:30358517-30359341 FORWARD LENGTH=274)

HSP 1 Score: 84.7297 bits (208), Expect = 1.225e-17
Identity = 41/84 (48.81%), Postives = 55/84 (65.48%), Query Frame = -3

Query:    7 RSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLGT 258
            R VW+ NL  E  LIR ++D FP ++MDTEFPG++VRP     +F+      Y  LK NV+ L +IQ+G T S+ +GNLPT GT
Sbjct:   13 REVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVG---TFKSNADYHYETLKTNVNILKMIQLGLTFSNEQGNLPTCGT 93

[Close]

BLAST of HO067287 vs. TAIR peptide
Match: AT1G80780.1 (| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr1:30358517-30359341 FORWARD LENGTH=274)

HSP 1 Score: 84.7297 bits (208), Expect = 1.225e-17
Identity = 41/84 (48.81%), Postives = 55/84 (65.48%), Query Frame = -3

Query:    7 RSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLGT 258
            R VW+ NL  E  LIR ++D FP ++MDTEFPG++VRP     +F+      Y  LK NV+ L +IQ+G T S+ +GNLPT GT
Sbjct:   13 REVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVG---TFKSNADYHYETLKTNVNILKMIQLGLTFSNEQGNLPTCGT 93

[Close]

BLAST of HO067287 vs. TAIR peptide
Match: AT1G15920.1 (| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr1:5469962-5470822 FORWARD LENGTH=286)

HSP 1 Score: 83.5741 bits (205), Expect = 2.728e-17
Identity = 43/87 (49.43%), Postives = 56/87 (64.37%), Query Frame = -3

Query:    7 RSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPS---FRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLGT 258
            R VW+ NL+ E  LI   ID FP ++MDTEFPG++ +  + +P+   +       Y  LKANV+ L LIQ+G TLSD KGNLPT GT
Sbjct:   17 REVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTLKANVNMLKLIQLGLTLSDEKGNLPTCGT 103

[Close]

BLAST of HO067287 vs. TAIR peptide
Match: AT1G15920.2 (| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr1:5469962-5470822 FORWARD LENGTH=286)

HSP 1 Score: 83.5741 bits (205), Expect = 2.728e-17
Identity = 43/87 (49.43%), Postives = 56/87 (64.37%), Query Frame = -3

Query:    7 RSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPS---FRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNLPTLGT 258
            R VW+ NL+ E  LI   ID FP ++MDTEFPG++ +  + +P+   +       Y  LKANV+ L LIQ+G TLSD KGNLPT GT
Sbjct:   17 REVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTLKANVNMLKLIQLGLTLSDEKGNLPTCGT 103

[Close]

BLAST of HO067287 vs. TAIR peptide
Match: AT1G06450.1 (| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr1:1965924-1967006 FORWARD LENGTH=360)

HSP 1 Score: 56.225 bits (134), Expect = 4.664e-9
Identity = 32/81 (39.51%), Postives = 42/81 (51.85%), Query Frame = -3

Query:   22 LTRSVWSSNLDFEFKLIRSLIDSFPLISMDTEFPGVIVRPDSGDPSFRHRGACLYAVLKANVDRLHLIQIGPTLSDHKGNL 264
            L R VW SN+D E   +   +  FPLI+ DTE+PG+I R       F       Y  +K NV+   LIQ G TL + KG +
Sbjct:    8 LARRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFR-----TYFDSSSDECYRAMKGNVENTKLIQCGFTLFNAKGEI 83

The following BLAST results are available for this feature:

BLAST of HO067287 vs. SwissProt
BLAST of HO067287 vs. TrEMBL
BLAST of HO067287 vs. TAIR peptide

BLAST of HO067287 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
CAF1I_ARATH	1.301e-18	58.14	Probable CCR4-associated factor 1 homolog 9 OS=Ara...	[more]
CAF1K_ARATH	2.898e-18	51.65	Probable CCR4-associated factor 1 homolog 11 OS=Ar...	[more]
CAF1J_ARATH	1.101e-17	50.57	Probable CCR4-associated factor 1 homolog 10 OS=Ar...	[more]
CAF1G_ARATH	3.204e-17	50.00	Probable CCR4-associated factor 1 homolog 7 OS=Ara...	[more]
CAF1F_ARATH	1.590e-16	48.81	Probable CCR4-associated factor 1 homolog 6 OS=Ara...	[more]
CAF1B_ARATH	3.543e-16	49.43	Probable CCR4-associated factor 1 homolog 2 OS=Ara...	[more]
CAF1_SCHPO	2.999e-15	52.50	Poly(A) ribonuclease pop2 OS=Schizosaccharomyces p...	[more]
CNOT8_MOUSE	3.104e-12	41.49	CCR4-NOT transcription complex subunit 8 OS=Mus mu...	[more]
CNOT8_HUMAN	3.104e-12	41.49	CCR4-NOT transcription complex subunit 8 OS=Homo s...	[more]
POP2_YEAST	1.179e-11	39.29	Poly(A) ribonuclease POP2 OS=Saccharomyces cerevis...	[more]

BLAST of HO067287 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9HBR3_POPTR	1.012e-24	58.10	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9IIP4_POPTR	1.908e-23	62.37	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A5BKL7_VITVI	4.250e-23	63.83	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9SVZ3_RICCO	7.249e-23	58.59	Ccr4-associated factor, putative OS=Ricinus commun...	[more]
C6TD00_SOYBN	1.786e-21	56.84	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9SCZ3_RICCO	1.157e-20	54.74	Ccr4-associated factor, putative OS=Ricinus commun...	[more]
A5BID5_VITVI	5.744e-20	58.62	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9MYV0_POPTR	2.183e-19	55.43	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B8LFH5_IPOBA	2.183e-19	56.04	CCR4-associated factor OS=Ipomoea batatas PE=2 SV=...	[more]
D7LNQ2_ARALY	1.848e-18	59.30	Putative uncharacterized protein OS=Arabidopsis ly...	[more]

BLAST of HO067287 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT3G44260.1	1.002e-19	58.14	\| Symbols: \| Polynucleotidyl transferase, ribonuc...	[more]
AT5G22250.1	2.232e-19	51.65	\| Symbols: \| Polynucleotidyl transferase, ribonuc...	[more]
AT5G10960.1	8.481e-19	50.57	\| Symbols: \| Polynucleotidyl transferase, ribonuc...	[more]
AT2G32070.1	2.467e-18	50.00	\| Symbols: \| Polynucleotidyl transferase, ribonuc...	[more]
AT1G80780.3	1.225e-17	48.81	\| Symbols: \| Polynucleotidyl transferase, ribonuc...	[more]
AT1G80780.2	1.225e-17	48.81	\| Symbols: \| Polynucleotidyl transferase, ribonuc...	[more]
AT1G80780.1	1.225e-17	48.81	\| Symbols: \| Polynucleotidyl transferase, ribonuc...	[more]
AT1G15920.1	2.728e-17	49.43	\| Symbols: \| Polynucleotidyl transferase, ribonuc...	[more]
AT1G15920.2	2.728e-17	49.43	\| Symbols: \| Polynucleotidyl transferase, ribonuc...	[more]
AT1G06450.1	4.664e-9	39.51	\| Symbols: \| Polynucleotidyl transferase, ribonuc...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 33..112 score: 3.9
IPR012337	Ribonuclease H-like	SUPERFAMILY	53098	Ribonuclease H-like	coord: 20..118 score: 1.7
None	No IPR available	GENE3D	3.30.420.10	no description	coord: 27..113 score: 3.2
None	No IPR available	PANTHER	PTHR10797	CCR4-ASSOCIATED FACTOR	coord: 27..116 score: 1

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO067287 ID=HO067287; Name=HO067287; organism=Cicer arietinum; type=EST; length=356bp
CGGGCAGGTACCTAGGGTTGGAAGATTACCTTTATGATCGGATAGAGTGG
GTCCAATCTGTATAAGGTGCAACCGGTCCACGTTCGCTTTGAGAACAGCG
TAGAGACACGCGCCACGGTGCCGGAACGAAGGATCACCGGAATCGGGACG
AACAATGACACCCGGAAATTCAGTGTCCATGGAAATGAGAGGAAATGAAT
CGATAAGAGATCGAATCAACTTGAATTCGAAATCGAGATTGGAGCTCCAC
ACTGAGCGTGTGAGGACGGGACCATTGGATCGAGGAGAAAGGGGCAGTGG
TTCGGCGAGAGGTTTGCGGTTACACATCGTGCCCCGCGTACCTCGGCCGC
GACCAC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR006941	RNase_CAF1
IPR012337	RNaseH-like_sf

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