FE671850

EST Overview


Name	FE671850
Unique Name	FE671850
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	466

Libraries


Library Name	Type
LIBEST_022820 Drought-stressed chickpea leave library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of FE671850 vs. SwissProt
Match: SKI31_ARATH (F-box protein SKIP31 OS=Arabidopsis thaliana GN=SKIP31 PE=1 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 3.630e-8
Identity = 32/71 (45.07%), Postives = 37/71 (52.11%), Query Frame = -2

Query:  253 PTNELLVCTISGHCFDRLLSPSXXXXXXXXXXXXXXXXXXPFMGSGRFARAYLLGYNCADEKELEATLRFC 465
            P  +L+VCTISG C D LL  +                   F    R ARA+ LGYNC DE+ELE TLRFC
Sbjct:  247 PEGDLMVCTISGVCSDTLLVQTEPDADGCYEEEAELEAEV-FTDKSRLARAFELGYNCDDEQELERTLRFC 316

[Close]

BLAST of FE671850 vs. TrEMBL
Match: C6TIJ8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.405e-18
Identity = 50/72 (69.44%), Postives = 50/72 (69.44%), Query Frame = -2

Query:  253 PTNELLVCTISGHCFDRLLSPSXXXXXXXXXXXXXXXXXXP-FMGSGRFARAYLLGYNCADEKELEATLRFC 465
            PTN LLVCTISGHC DRLLSPS                    FMGSGRFARAYLLGYNCADEKELEATLRFC
Sbjct:  131 PTNGLLVCTISGHCLDRLLSPSEEMEPDTEQQQGGVADEAEPFMGSGRFARAYLLGYNCADEKELEATLRFC 202

[Close]

BLAST of FE671850 vs. TrEMBL
Match: B9N0Q8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_827502 PE=4 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.834e-18
Identity = 48/71 (67.61%), Postives = 49/71 (69.01%), Query Frame = -2

Query:  253 PTNELLVCTISGHCFDRLLSPSXXXXXXXXXXXXXXXXXXPFMGSGRFARAYLLGYNCADEKELEATLRFC 465
            PTNELLVCTISGHCFDR L PS                  PFMGSGRFARAYLLGYNC D+KELEA LRFC
Sbjct:  260 PTNELLVCTISGHCFDRWLLPSEMEPDPDQQQGGLTDEAEPFMGSGRFARAYLLGYNCDDDKELEAALRFC 330

[Close]

BLAST of FE671850 vs. TrEMBL
Match: B9S1R3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0867430 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.522e-16
Identity = 45/71 (63.38%), Postives = 47/71 (66.20%), Query Frame = -2

Query:  253 PTNELLVCTISGHCFDRLLSPSXXXXXXXXXXXXXXXXXXPFMGSGRFARAYLLGYNCADEKELEATLRFC 465
            P NELLVCT+SG CFDRLLSP                    FMGSGRFARAYLLGYNC +E ELEATLRFC
Sbjct:  248 PVNELLVCTVSGLCFDRLLSPCEMEPDAAESAATDEAEP--FMGSGRFARAYLLGYNCDNENELEATLRFC 316

[Close]

BLAST of FE671850 vs. TrEMBL
Match: D7TFB9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_87.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00036874001 PE=4 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.113e-15
Identity = 45/69 (65.22%), Postives = 48/69 (69.57%), Query Frame = -2

Query:  253 NELLVCTISGHCFDRLLSPSXXXXXXXXXXXXXXXXXXPFMGSGRFARAYLLGYNCADEKELEATLRFC 459
            N+++VCTISGHCFDRLL  S                  PFMGSGRFARAYLLGYNCADEKELEA LRFC
Sbjct:  238 NDIVVCTISGHCFDRLLV-SDEEPDIEQQQGGVTDEAEPFMGSGRFARAYLLGYNCADEKELEAALRFC 305

[Close]

BLAST of FE671850 vs. TrEMBL
Match: A9SKW4_PHYPA (Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_131539 PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.504e-12
Identity = 39/76 (51.32%), Postives = 45/76 (59.21%), Query Frame = -2

Query:  256 PTNELLVCTISGHCFDRLLSPSXXXXXXXXXXXXXXXXXXP------FMGSGRFARAYLLGYNCADEKELEATLRF 465
            P+NELLVCT+SG CFDR LSPS                         F+GSGR  RAYLLGYNCADE+EL+A  R+
Sbjct:  185 PSNELLVCTVSGRCFDRWLSPSEENYAEEFVRQQQADANAGADEGEPFLGSGRLGRAYLLGYNCADERELDAAYRY 260

[Close]

BLAST of FE671850 vs. TrEMBL
Match: Q5Z9H2_ORYSJ (F-box family protein-like OS=Oryza sativa subsp. japonica GN=P0655A07.13 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.377e-12
Identity = 39/70 (55.71%), Postives = 42/70 (60.00%), Query Frame = -2

Query:  253 LLVCTISGHCFDRLLSPSXXXXXXXXXXXXXXXXXXP---FMGSGRFARAYLLGYNCADEKELEATLRFC 453
            LL+CTISGHCF+R L P                       FMGSGRFARAY LGY+CADEKELE  LRFC
Sbjct:  306 LLLCTISGHCFERWLCPDDEWDADDDTDLQQAGMTDEAEPFMGSGRFARAYQLGYSCADEKELEYALRFC 375

[Close]

BLAST of FE671850 vs. TrEMBL
Match: Q0D9L9_ORYSJ (Os06g0709100 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os06g0709100 PE=4 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 4.377e-12
Identity = 39/70 (55.71%), Postives = 42/70 (60.00%), Query Frame = -2

Query:  253 LLVCTISGHCFDRLLSPSXXXXXXXXXXXXXXXXXXP---FMGSGRFARAYLLGYNCADEKELEATLRFC 453
            LL+CTISGHCF+R L P                       FMGSGRFARAY LGY+CADEKELE  LRFC
Sbjct:  288 LLLCTISGHCFERWLCPDDEWDADDDTDLQQAGMTDEAEPFMGSGRFARAYQLGYSCADEKELEYALRFC 357

[Close]

BLAST of FE671850 vs. TrEMBL
Match: A2YGV7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24420 PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.377e-12
Identity = 39/70 (55.71%), Postives = 42/70 (60.00%), Query Frame = -2

Query:  253 LLVCTISGHCFDRLLSPSXXXXXXXXXXXXXXXXXXP---FMGSGRFARAYLLGYNCADEKELEATLRFC 453
            LL+CTISGHCF+R L P                       FMGSGRFARAY LGY+CADEKELE  LRFC
Sbjct:  308 LLLCTISGHCFERWLCPDDEWDADDDTDLQQAGMTDEAEPFMGSGRFARAYQLGYSCADEKELEYALRFC 377

[Close]

BLAST of FE671850 vs. TrEMBL
Match: B6TRX2_MAIZE (F-box domain containing protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.663e-11
Identity = 37/69 (53.62%), Postives = 41/69 (59.42%), Query Frame = -2

Query:  253 LLVCTISGHCFDRLLSPSXXXXXXXXXXXXXXXXXXP--FMGSGRFARAYLLGYNCADEKELEATLRFC 453
            LL+CTISGHCF+R L P                      FMGSGR+ARA +LGYNC DEKELE  LRFC
Sbjct:  307 LLLCTISGHCFERWLCPDDEWDADDTDLQQAGVVDEAEPFMGSGRYARAIMLGYNCTDEKELEDALRFC 375

[Close]

BLAST of FE671850 vs. TrEMBL
Match: B4FMN1_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.663e-11
Identity = 37/69 (53.62%), Postives = 41/69 (59.42%), Query Frame = -2

Query:  253 LLVCTISGHCFDRLLSPSXXXXXXXXXXXXXXXXXXP--FMGSGRFARAYLLGYNCADEKELEATLRFC 453
            LL+CTISGHCF+R L P                      FMGSGR+ARA +LGYNC DEKELE  LRFC
Sbjct:  315 LLLCTISGHCFERWLCPDDEWDADDTDLQQAGVVDEAEPFMGSGRYARAIMLGYNCTDEKELEDALRFC 383

[Close]

BLAST of FE671850 vs. TAIR peptide
Match: AT5G45360.1 (| Symbols: | F-box family protein | chr5:18384783-18386670 REVERSE LENGTH=316)

HSP 1 Score: 57.3806 bits (137), Expect = 4.189e-9
Identity = 32/71 (45.07%), Postives = 37/71 (52.11%), Query Frame = -2

Query:  253 PTNELLVCTISGHCFDRLLSPSXXXXXXXXXXXXXXXXXXPFMGSGRFARAYLLGYNCADEKELEATLRFC 465
            P  +L+VCTISG C D LL  +                   F    R ARA+ LGYNC DE+ELE TLRFC
Sbjct:  247 PEGDLMVCTISGVCSDTLLVQTEPDADGCYEEEAELEAEV-FTDKSRLARAFELGYNCDDEQELERTLRFC 316

The following BLAST results are available for this feature:

BLAST of FE671850 vs. SwissProt
BLAST of FE671850 vs. TrEMBL
BLAST of FE671850 vs. TAIR peptide

BLAST of FE671850 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1


Match Name	E-value	Identity	Description
SKI31_ARATH	3.630e-8	45.07	F-box protein SKIP31 OS=Arabidopsis thaliana GN=SK...	[more]

BLAST of FE671850 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TIJ8_SOYBN	1.405e-18	69.44	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9N0Q8_POPTR	1.834e-18	67.61	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9S1R3_RICCO	8.522e-16	63.38	Putative uncharacterized protein OS=Ricinus commun...	[more]
D7TFB9_VITVI	1.113e-15	65.22	Whole genome shotgun sequence of line PN40024, sca...	[more]
A9SKW4_PHYPA	1.504e-12	51.32	Predicted protein (Fragment) OS=Physcomitrella pat...	[more]
Q5Z9H2_ORYSJ	4.377e-12	55.71	F-box family protein-like OS=Oryza sativa subsp. j...	[more]
Q0D9L9_ORYSJ	4.377e-12	55.71	Os06g0709100 protein (Fragment) OS=Oryza sativa su...	[more]
A2YGV7_ORYSI	4.377e-12	55.71	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B6TRX2_MAIZE	1.663e-11	53.62	F-box domain containing protein OS=Zea mays PE=2 S...	[more]
B4FMN1_MAIZE	1.663e-11	53.62	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]

BLAST of FE671850 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G45360.1	4.189e-9	45.07	\| Symbols: \| F-box family protein \| chr5:18384783...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 70..89 score
None	No IPR available	SEG	seg	seg	coord: 11..33 score
None	No IPR available	SEG	seg	seg	coord: 23..41 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FE671850 ID=FE671850; Name=FE671850; organism=Cicer arietinum; type=EST; length=466bp
ATGTACCAAGAAATATAAAGAACAACAATTGCATCAACGTTAAAAATAAA
AATTCTAGAGGATTCAGCTATAAACCAAAGCATACAACTATTAACATATA
AAACATTTAGACAAAAGTGCAGTTTTATTGTAATCTAAAGACTAAAACAG
GTATCCTTATGCCAAGAGAAACTTAAAAGGAAAGCTGATATATTTGATGT
TAAATTGGTAAATGATGAAACCATTCACTCCAGAAGAGCTAAATGGGAAT
CAGCAGAACCTCAAAGTAGCCTCAAGCTCCTTTTCATCAGCACAATTGTA
TCCCAGCAAATAAGCTCGTGCAAAACGGCCAGATCCCATAAATGGTTCTG
CCTCATCCGTTGCAGCAGCTTGCTGCTGCTCAGCATCTGGCTCCATTTCA
GATGGCGACAGTAACCTATCAAAACAGTGCCCCGATATTGTACAGACCAA
AAGCTCGTTGGTGGGA

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