FE672244

EST Overview


Name	FE672244
Unique Name	FE672244
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	658

Libraries


Library Name	Type
LIBEST_022820 Drought-stressed chickpea leave library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

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BLAST of FE672244 vs. SwissProt
Match: HMGL_IPONI (HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.025e-32
Identity = 65/110 (59.09%), Postives = 85/110 (77.27%), Query Frame = -3

Query:  312 KGSTVAKPADSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIGLAEG 641
            KG      +D++L  K     TK++KKA KDPN+PKRPPSAFFVFM +FR+T+K+++PNNKSVAVVGKAGG +WK L+ A+KAP++ +AEK K+EYEK L+AYN   A G
Sbjct:    2 KGGKSKAKSDNKLAVKKQAADTKKTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYNKKQAAG 111

[Close]

BLAST of FE672244 vs. SwissProt
Match: HMGL_SOYBN (HMG1/2-like protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.111e-30
Identity = 67/117 (57.26%), Postives = 82/117 (70.09%), Query Frame = -3

Query:  306 KGSTVAKPADSRLKRKGAGTGTKQSK-----KASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIGLAEGKT 641
            K  T +K AD +L     G  TK  K     KA+KDPN+PKRPPSAFFVFM EFR+ F KE+P NK+V+ VGKA G +WK++S A+KAPYV ++EK K EYEK +RAYN   AEG T
Sbjct:    5 KSKTESKRADPKLAVNKKGAATKARKPAGKGKAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYNKKQAEGPT 121

[Close]

BLAST of FE672244 vs. SwissProt
Match: HMGL_VICFA (HMG1/2-like protein OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.228e-29
Identity = 72/117 (61.54%), Postives = 88/117 (75.21%), Query Frame = -3

Query:  309 KGSTVAKPADSRL--KRKGAGT---GTKQSK-KASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIGLAEGK 641
            K    +K A+++L   +KGA     G K +K K  KDPN+PKRPPSAFFVFM++FRE +KK++PNNKSVA VGKA G+EWKSLS  +KAPYV+RA K KEEYE TL+AYN  L EGK
Sbjct:    5 KSKGESKKAETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAYNKKL-EGK 120

[Close]

BLAST of FE672244 vs. SwissProt
Match: MNB1B_MAIZE (DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.951e-28
Identity = 66/104 (63.46%), Postives = 75/104 (72.12%), Query Frame = -3

Query:  324 AKPADSRL--KRKGAGTGTKQSK-KASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIG 626
            A  AD++L  K KGA    K  K KA KDPN+PKR PSAFFVFM EFR+ FK++NP NKSVA VGKA G  WKSLS +DKAPYV +A KLK EY K + AYN G
Sbjct:    9 AAKADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYNKG 112

[Close]

BLAST of FE672244 vs. SwissProt
Match: HMGL_WHEAT (HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.951e-28
Identity = 65/105 (61.90%), Postives = 76/105 (72.38%), Query Frame = -3

Query:  324 AKPADSRL--KRKGAGTGTKQSKK--ASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIG 626
            A  AD++L  K KGA     + KK  A KDPN+PKR PSAFFVFM EFRE FK++NP NKSVA VGKA G+ WKSLS ++KAPYV +A KLK EY K + AYN G
Sbjct:    9 AAKADAKLAVKSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAYNKG 113

[Close]

BLAST of FE672244 vs. SwissProt
Match: HMGB3_BOVIN (High mobility group protein B3 OS=Bos taurus GN=HMGB3 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.557e-16
Identity = 46/103 (44.66%), Postives = 59/103 (57.28%), Query Frame = -3

Query:  333 KGSTVAKPADSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAY 641
            K   +AK    R  R+    G  +  K  KDPN PKRPPS FF+F SEFR   K  NP   S+  V K  G+ W +LS ++K PY+ +A KLKE+YEK +  Y
Sbjct:   59 KFDEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSANP-GISIGDVAKKLGEMWNNLSDSEKQPYINKAAKLKEKYEKDVADY 160

[Close]

BLAST of FE672244 vs. SwissProt
Match: HMGB3_MOUSE (High mobility group protein B3 OS=Mus musculus GN=Hmgb3 PE=2 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 3.470e-16
Identity = 47/103 (45.63%), Postives = 58/103 (56.31%), Query Frame = -3

Query:  333 KGSTVAKPADSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAY 641
            K   +AK    R  R+    G  +  K  KDPN PKRPPS FF+F SEFR   K  NP   S+  V K  G+ W +LS  +K PYV +A KLKE+YEK +  Y
Sbjct:   59 KFDEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDNEKQPYVTKAAKLKEKYEKDVADY 160

[Close]

BLAST of FE672244 vs. SwissProt
Match: HMGB3_CHICK (High mobility group protein B3 OS=Gallus gallus GN=HMGB3 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 3.470e-16
Identity = 47/103 (45.63%), Postives = 58/103 (56.31%), Query Frame = -3

Query:  333 KGSTVAKPADSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAY 641
            K   +AK    R  R+    G  +  K  KDPN PKRPPSAFF+F SEFR   K  NP   S+  V K  G+ W +LS  +K PY  +A KLKE+YEK +  Y
Sbjct:   59 KFDEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSAFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADY 160

[Close]

BLAST of FE672244 vs. SwissProt
Match: HMGB3_HUMAN (High mobility group protein B3 OS=Homo sapiens GN=HMGB3 PE=1 SV=4)

HSP 1 Score: 84.7297 bits (208), Expect = 4.531e-16
Identity = 45/103 (43.69%), Postives = 59/103 (57.28%), Query Frame = -3

Query:  333 KGSTVAKPADSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAY 641
            K   +AK    R  R+    G  +  K  KDPN PKRPPS FF+F SEFR   K  NP   S+  V K  G+ W +L+ ++K PY+ +A KLKE+YEK +  Y
Sbjct:   59 KFDEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADY 160

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BLAST of FE672244 vs. SwissProt
Match: HMGB1_RAT (High mobility group protein B1 OS=Rattus norvegicus GN=Hmgb1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 4.531e-16
Identity = 44/88 (50.00%), Postives = 58/88 (65.91%), Query Frame = -3

Query:  309 QSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIGLAEGK 572
            ++KK  KDPN PKRPPSAFF+F SE+R   K E+P   S+  V K  G+ W + +  DK PY ++A KLKE+YEK + AY    A+GK
Sbjct:   84 ETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR---AKGK 167

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BLAST of FE672244 vs. TrEMBL
Match: C6SZ57_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.254e-42
Identity = 87/113 (76.99%), Postives = 98/113 (86.73%), Query Frame = -3

Query:  309 MPKGSTVAKPADSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIGLAEGK 647
            MPK  + AK ADSRLKRKGAG G KQS+KA+KDPN+PKRPPSAFFVFMSEFRE FKKE+PNNKSVAVVGKAGG++WKSLS A+KAP+V  AEK K+EYEKT+ AYN  L EGK
Sbjct:    1 MPKAKSDAKAADSRLKRKGAGAGRKQSRKAAKDPNKPKRPPSAFFVFMSEFREQFKKEHPNNKSVAVVGKAGGEKWKSLSDAEKAPFVATAEKKKQEYEKTISAYNKQL-EGK 112

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BLAST of FE672244 vs. TrEMBL
Match: P93704_CANGL (HMG-1 OS=Canavalia gladiata PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.350e-41
Identity = 86/115 (74.78%), Postives = 97/115 (84.35%), Query Frame = -3

Query:  303 MPKGSTVAKPADSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIGLAEGKTP 647
            MPK    AK AD+RLKRKGAG G KQSKKA+KDPN+PKRPPSAFFVFMSEFRE +KKE+P NKSVAVVGKAGG +WKSLS A+KAP+V RAEK KEEY+K++ AYN  L EGK P
Sbjct:    1 MPKVKADAKAADNRLKRKGAGAGRKQSKKAAKDPNKPKRPPSAFFVFMSEFREQYKKEHPTNKSVAVVGKAGGDKWKSLSDAEKAPFVARAEKKKEEYDKSILAYNRKL-EGKNP 114

[Close]

BLAST of FE672244 vs. TrEMBL
Match: C6SXC1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.350e-41
Identity = 87/113 (76.99%), Postives = 96/113 (84.96%), Query Frame = -3

Query:  309 MPKGSTVAKPADSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIGLAEGK 647
            MPK  + AK ADSRLKRKGAG G KQSKKA+KDPN+PK PPSAFFVFMSEFRE FKKE+PNNKSVAVVGKAGG +WKSLS A+KAP+V  AEK K+EYEKT+ AYN  L EGK
Sbjct:    1 MPKAKSDAKAADSRLKRKGAGAGRKQSKKAAKDPNKPKGPPSAFFVFMSEFREQFKKEHPNNKSVAVVGKAGGDKWKSLSDAEKAPFVATAEKKKQEYEKTILAYNKKL-EGK 112

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BLAST of FE672244 vs. TrEMBL
Match: B4UW92_ARAHY (High mobility group protein 1 OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.318e-39
Identity = 82/106 (77.36%), Postives = 92/106 (86.79%), Query Frame = -3

Query:  330 MPKGSTVAKPADSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYN 647
            MPK    AK AD+RLKRKGAGTG KQ+KKA KDPN+PKRPPSAFFVFMSEFRE +KKE+PNNKSVAVVGKAGG  WKS+S ADKAPY  +AEK KEEYE+T++AYN
Sbjct:    1 MPKVKADAKAADNRLKRKGAGTGRKQAKKA-KDPNKPKRPPSAFFVFMSEFREQYKKEHPNNKSVAVVGKAGGDRWKSMSDADKAPYQAKAEKKKEEYERTMQAYN 105

[Close]

BLAST of FE672244 vs. TrEMBL
Match: B7FN80_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.687e-37
Identity = 79/113 (69.91%), Postives = 91/113 (80.53%), Query Frame = -3

Query:  309 MPKGSTVAKPADSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIGLAEGK 647
            MPK    +KPAD+RLKRKGAG G KQ+KKA+KDPN+PKRPPSAFFVFMS+FRE +KK++PNNKSVA VGKA G+ WKS+S  DKAPY  RA K KEEYE   +AYN  L EGK
Sbjct:    1 MPKVKADSKPADNRLKRKGAGAGRKQTKKAAKDPNKPKRPPSAFFVFMSDFREQYKKDHPNNKSVAAVGKACGEAWKSMSEEDKAPYAARALKKKEEYEVATQAYNKKL-EGK 112

[Close]

BLAST of FE672244 vs. TrEMBL
Match: B9H672_POPTR (High mobility group family OS=Populus trichocarpa GN=HMGB915 PE=4 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.363e-33
Identity = 69/101 (68.32%), Postives = 82/101 (81.19%), Query Frame = -3

Query:  312 DSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIGLAEG 614
            D++LKRKGAG GTK SKKA+KDPN+PKRP SAFFVFM +FR+ +K+ +PNNKSVA VGKAGG +WKSLS A+KAPY  +AEK K EY K + AYN  LA G
Sbjct:   14 DAKLKRKGAGAGTKASKKAAKDPNKPKRPASAFFVFMEDFRKQYKESHPNNKSVAAVGKAGGDKWKSLSEAEKAPYAAKAEKRKFEYNKDMAAYNKRLAGG 114

[Close]

BLAST of FE672244 vs. TrEMBL
Match: A9PD33_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.560e-32
Identity = 68/101 (67.33%), Postives = 82/101 (81.19%), Query Frame = -3

Query:  312 DSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIGLAEG 614
            D++LKRKGAG GTK SKKA+KDPN+PKRP SAFFVFM +FR+ +K+ +PNNKSVA VGKAGG +WKSLS A+KAP+  +AEK K EY K + AYN  LA G
Sbjct:   14 DAKLKRKGAGAGTKASKKAAKDPNKPKRPASAFFVFMEDFRKQYKESHPNNKSVAAVGKAGGDKWKSLSEAEKAPFAAKAEKRKFEYNKDMAAYNKRLAGG 114

[Close]

BLAST of FE672244 vs. TrEMBL
Match: Q4ZH67_CUCSA (High mobility group protein OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.476e-32
Identity = 68/110 (61.82%), Postives = 86/110 (78.18%), Query Frame = -3

Query:  312 KGSTVAKPADSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIGLAEG 641
            K     K  D++LK K AG  +K+S KA+KDPN+PKRP SAFFVFM EFR+ +KKE+PNNKSVA VGKAGG +WKS+S A+KAPY+ +AEK K EY K+++AYN  +AEG
Sbjct:    5 KSKGAPKKTDTKLKSKSAGA-SKKSAKAAKDPNKPKRPASAFFVFMEEFRKQYKKEHPNNKSVAAVGKAGGDKWKSMSDAEKAPYINKAEKRKTEYNKSMQAYNKRIAEG 113

[Close]

BLAST of FE672244 vs. TrEMBL
Match: D4P597_GOSHI (High mobility group box 3 protein OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.555e-31
Identity = 64/102 (62.75%), Postives = 86/102 (84.31%), Query Frame = -3

Query:  312 ADSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIGLAEG 617
            A ++LK KGAG G K++KKA+KDPN+PKRP SAFFVFM EFR+ +K+ NP+N+SV+ VGKAGG++WKS++ A+KAPYV++AEK K EY K ++AYN+ LA G
Sbjct:    3 AGNKLKGKGAGAG-KRAKKAAKDPNKPKRPASAFFVFMEEFRKQYKEANPDNRSVSAVGKAGGEKWKSMTDAEKAPYVQKAEKRKSEYNKKMQAYNLKLAGG 103

[Close]

BLAST of FE672244 vs. TrEMBL
Match: Q40094_IPONI (High mobility group protein 2 HMG2 OS=Ipomoea nil PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.118e-30
Identity = 62/104 (59.62%), Postives = 84/104 (80.77%), Query Frame = -3

Query:  330 KGSTVAKPADSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYN 641
            KG      +D++L  K  G  TK+SKK+ KDPN+PKRPPSAFFVFM +FR+T+K+++PNNKSVA VGKAGG +WK L+ A+KAP++ +AEK K+EYEK+++AYN
Sbjct:    2 KGGKSKAKSDNKLAVKKRGCETKKSKKSVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAAVGKAGGDKWKQLTDAEKAPFIAKAEKRKQEYEKSMQAYN 105

[Close]

BLAST of FE672244 vs. TAIR peptide
Match: AT1G20693.3 (| Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | high mobility group B2 | chr1:7177282-7178487 FORWARD LENGTH=143)

HSP 1 Score: 135.191 bits (339), Expect = 3.023e-32
Identity = 72/114 (63.16%), Postives = 81/114 (71.05%), Query Frame = -3

Query:  312 TAMPKGSTVAKPADSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIGLAEG 653
            T   K S   KPA      KGAG G    K A+KDPN+PKRP SAFFVFM +FRETFKKENP NKSVA VGKA G +WKSLS ++KAPYV +AEK K EYEK ++AYN  L EG
Sbjct:   10 TRSSKLSVTKKPA------KGAGRG----KAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEG 113

[Close]

BLAST of FE672244 vs. TAIR peptide
Match: AT1G20693.2 (| Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | high mobility group B2 | chr1:7177282-7178487 FORWARD LENGTH=142)

HSP 1 Score: 135.191 bits (339), Expect = 3.023e-32
Identity = 72/114 (63.16%), Postives = 81/114 (71.05%), Query Frame = -3

Query:  312 TAMPKGSTVAKPADSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIGLAEG 653
            T   K S   KPA      KGAG G    K A+KDPN+PKRP SAFFVFM +FRETFKKENP NKSVA VGKA G +WKSLS ++KAPYV +AEK K EYEK ++AYN  L EG
Sbjct:   10 TRSSKLSVTKKPA------KGAGRG----KAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEG 113

[Close]

BLAST of FE672244 vs. TAIR peptide
Match: AT1G20693.1 (| Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | high mobility group B2 | chr1:7177282-7178487 FORWARD LENGTH=144)

HSP 1 Score: 135.191 bits (339), Expect = 3.023e-32
Identity = 72/114 (63.16%), Postives = 81/114 (71.05%), Query Frame = -3

Query:  312 TAMPKGSTVAKPADSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIGLAEG 653
            T   K S   KPA      KGAG G    K A+KDPN+PKRP SAFFVFM +FRETFKKENP NKSVA VGKA G +WKSLS ++KAPYV +AEK K EYEK ++AYN  L EG
Sbjct:   10 TRSSKLSVTKKPA------KGAGRG----KAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEG 113

[Close]

BLAST of FE672244 vs. TAIR peptide
Match: AT3G51880.4 (| Symbols: HMGB1 | high mobility group B1 | chr3:19247241-19248491 REVERSE LENGTH=161)

HSP 1 Score: 129.028 bits (323), Expect = 2.166e-30
Identity = 63/103 (61.17%), Postives = 78/103 (75.73%), Query Frame = -3

Query:  312 PADSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIGLAEG 620
            PA+   KR+     T++ KKA KDPN+PKR PSAFFVF+ +FR TFKKENPN K+V+ VGKAGG++WKS+S A+KAPY E+A K K EYEK + AYN  L EG
Sbjct:   31 PAEKPTKRE-----TRKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEG 128

[Close]

BLAST of FE672244 vs. TAIR peptide
Match: AT3G51880.3 (| Symbols: HMGB1, NFD1 | high mobility group B1 | chr3:19247241-19248491 REVERSE LENGTH=178)

HSP 1 Score: 129.028 bits (323), Expect = 2.166e-30
Identity = 63/103 (61.17%), Postives = 78/103 (75.73%), Query Frame = -3

Query:  312 PADSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIGLAEG 620
            PA+   KR+     T++ KKA KDPN+PKR PSAFFVF+ +FR TFKKENPN K+V+ VGKAGG++WKS+S A+KAPY E+A K K EYEK + AYN  L EG
Sbjct:   31 PAEKPTKRE-----TRKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEG 128

[Close]

BLAST of FE672244 vs. TAIR peptide
Match: AT3G51880.2 (| Symbols: HMGB1, NFD1 | high mobility group B1 | chr3:19247241-19248491 REVERSE LENGTH=185)

HSP 1 Score: 129.028 bits (323), Expect = 2.166e-30
Identity = 63/103 (61.17%), Postives = 78/103 (75.73%), Query Frame = -3

Query:  312 PADSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIGLAEG 620
            PA+   KR+     T++ KKA KDPN+PKR PSAFFVF+ +FR TFKKENPN K+V+ VGKAGG++WKS+S A+KAPY E+A K K EYEK + AYN  L EG
Sbjct:   31 PAEKPTKRE-----TRKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEG 128

[Close]

BLAST of FE672244 vs. TAIR peptide
Match: AT3G51880.1 (| Symbols: HMGB1, NFD1 | high mobility group B1 | chr3:19247241-19248491 REVERSE LENGTH=178)

HSP 1 Score: 129.028 bits (323), Expect = 2.166e-30
Identity = 63/103 (61.17%), Postives = 78/103 (75.73%), Query Frame = -3

Query:  312 PADSRLKRKGAGTGTKQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIGLAEG 620
            PA+   KR+     T++ KKA KDPN+PKR PSAFFVF+ +FR TFKKENPN K+V+ VGKAGG++WKS+S A+KAPY E+A K K EYEK + AYN  L EG
Sbjct:   31 PAEKPTKRE-----TRKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEG 128

[Close]

BLAST of FE672244 vs. TAIR peptide
Match: AT1G20696.3 (| Symbols: HMGB3, NFD3, NFD03 | high mobility group B3 | chr1:7179825-7181170 FORWARD LENGTH=140)

HSP 1 Score: 124.79 bits (312), Expect = 4.085e-29
Identity = 58/88 (65.91%), Postives = 73/88 (82.95%), Query Frame = -3

Query:  312 KQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIGLAEG 575
            K +K A+KDPN+PKRP SAFFVFM +FR T+K+E+P NKSVA VGKAGG++WKSLS ++KAPYV +A+K K EYEK ++AYN  L EG
Sbjct:   23 KGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEG 110

[Close]

BLAST of FE672244 vs. TAIR peptide
Match: AT1G20696.1 (| Symbols: HMGB3, NFD3, NFD03 | high mobility group B3 | chr1:7179825-7181174 FORWARD LENGTH=141)

HSP 1 Score: 124.79 bits (312), Expect = 4.085e-29
Identity = 58/88 (65.91%), Postives = 73/88 (82.95%), Query Frame = -3

Query:  312 KQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYNIGLAEG 575
            K +K A+KDPN+PKRP SAFFVFM +FR T+K+E+P NKSVA VGKAGG++WKSLS ++KAPYV +A+K K EYEK ++AYN  L EG
Sbjct:   23 KGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEG 110

[Close]

BLAST of FE672244 vs. TAIR peptide
Match: AT1G20696.2 (| Symbols: HMGB3, NFD3, NFD03 | high mobility group B3 | chr1:7179825-7181193 FORWARD LENGTH=147)

HSP 1 Score: 121.324 bits (303), Expect = 4.517e-28
Identity = 55/82 (67.07%), Postives = 70/82 (85.37%), Query Frame = -3

Query:  330 KQSKKASKDPNRPKRPPSAFFVFMSEFRETFKKENPNNKSVAVVGKAGGKEWKSLSTADKAPYVERAEKLKEEYEKTLRAYN 575
            K +K A+KDPN+PKRP SAFFVFM +FR T+K+E+P NKSVA VGKAGG++WKSLS ++KAPYV +A+K K EYEK ++AYN
Sbjct:   23 KGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYN 104

The following BLAST results are available for this feature:

BLAST of FE672244 vs. SwissProt
BLAST of FE672244 vs. TrEMBL
BLAST of FE672244 vs. TAIR peptide

BLAST of FE672244 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
HMGL_IPONI	2.025e-32	59.09	HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1	[more]
HMGL_SOYBN	1.111e-30	57.26	HMG1/2-like protein OS=Glycine max PE=2 SV=1	[more]
HMGL_VICFA	1.228e-29	61.54	HMG1/2-like protein OS=Vicia faba PE=2 SV=1	[more]
MNB1B_MAIZE	3.951e-28	63.46	DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=...	[more]
HMGL_WHEAT	3.951e-28	61.90	HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1	[more]
HMGB3_BOVIN	1.557e-16	44.66	High mobility group protein B3 OS=Bos taurus GN=HM...	[more]
HMGB3_MOUSE	3.470e-16	45.63	High mobility group protein B3 OS=Mus musculus GN=...	[more]
HMGB3_CHICK	3.470e-16	45.63	High mobility group protein B3 OS=Gallus gallus GN...	[more]
HMGB3_HUMAN	4.531e-16	43.69	High mobility group protein B3 OS=Homo sapiens GN=...	[more]
HMGB1_RAT	4.531e-16	50.00	High mobility group protein B1 OS=Rattus norvegicu...	[more]

BLAST of FE672244 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6SZ57_SOYBN	8.254e-42	76.99	Putative uncharacterized protein OS=Glycine max PE...	[more]
P93704_CANGL	5.350e-41	74.78	HMG-1 OS=Canavalia gladiata PE=2 SV=1	[more]
C6SXC1_SOYBN	5.350e-41	76.99	Putative uncharacterized protein OS=Glycine max PE...	[more]
B4UW92_ARAHY	1.318e-39	77.36	High mobility group protein 1 OS=Arachis hypogaea ...	[more]
B7FN80_MEDTR	4.687e-37	69.91	Putative uncharacterized protein OS=Medicago trunc...	[more]
B9H672_POPTR	5.363e-33	68.32	High mobility group family OS=Populus trichocarpa ...	[more]
A9PD33_POPTR	1.560e-32	67.33	Putative uncharacterized protein OS=Populus tricho...	[more]
Q4ZH67_CUCSA	3.476e-32	61.82	High mobility group protein OS=Cucumis sativus PE=...	[more]
D4P597_GOSHI	6.555e-31	62.75	High mobility group box 3 protein OS=Gossypium hir...	[more]
Q40094_IPONI	1.118e-30	59.62	High mobility group protein 2 HMG2 OS=Ipomoea nil ...	[more]

BLAST of FE672244 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT1G20693.3	3.023e-32	63.16	\| Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 \| high m...	[more]
AT1G20693.2	3.023e-32	63.16	\| Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 \| high m...	[more]
AT1G20693.1	3.023e-32	63.16	\| Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 \| high m...	[more]
AT3G51880.4	2.166e-30	61.17	\| Symbols: HMGB1 \| high mobility group B1 \| chr3:1...	[more]
AT3G51880.3	2.166e-30	61.17	\| Symbols: HMGB1, NFD1 \| high mobility group B1 \| ...	[more]
AT3G51880.2	2.166e-30	61.17	\| Symbols: HMGB1, NFD1 \| high mobility group B1 \| ...	[more]
AT3G51880.1	2.166e-30	61.17	\| Symbols: HMGB1, NFD1 \| high mobility group B1 \| ...	[more]
AT1G20696.3	4.085e-29	65.91	\| Symbols: HMGB3, NFD3, NFD03 \| high mobility grou...	[more]
AT1G20696.1	4.085e-29	65.91	\| Symbols: HMGB3, NFD3, NFD03 \| high mobility grou...	[more]
AT1G20696.2	4.517e-28	67.07	\| Symbols: HMGB3, NFD3, NFD03 \| high mobility grou...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 5..44 score
None	No IPR available	SEG	seg	seg	coord: 13..26 score: NAcoord: 45..55 score
None	No IPR available	SEG	seg	seg	coord: 55..65 score
None	No IPR available	SEG	seg	seg	coord: 12..23 score
None	No IPR available	SEG	seg	seg	coord: 28..47 score
None	No IPR available	PANTHER	PTHR13711	SWI/SNF-RELATED CHROMATIN BINDING PROTEIN	coord: 36..114 score: 6.1
None	No IPR available	SEG	seg	seg	coord: 119..130 score: NAcoord: 133..143 score
IPR000910	High mobility group, HMG1/HMG2	GENE3D	1.10.30.10	no description	coord: 39..108 score: 3.5
IPR000910	High mobility group, HMG1/HMG2	PFAM	PF00505	HMG_box	coord: 40..109 score: 2
IPR000910	High mobility group, HMG1/HMG2	SMART	SM00398	no description	coord: 39..110 score: 1
IPR000910	High mobility group, HMG1/HMG2	PROFILE	PS50118	HMG_BOX_2	coord: 40..109 score: 20
IPR009071	High mobility group, superfamily	SUPERFAMILY	47095	HMG-box	coord: 20..113 score: 1.7

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FE672244 ID=FE672244; Name=FE672244; organism=Cicer arietinum; type=EST; length=658bp
ACCATTTAAAACGGAGTCTGTATTAATAGATATGGGATTTAAGTACACAT
CATGTCGGCTGAATCTAAAATAAAGATTGTAATCTAATAGCCCTAAGCAC
TGAAAAACTATTTATCACACAACAGCTGTTGACCGAGAGCATCTCCCTAA
TCAATGCGAACCTATTAAGTAAAAAAGATTCTATTGCAGTTACTCCTAAG
CTTATTCTTTGGTCTCCAGCAACTTTACTCGTCATCTTCATCATCATCTT
CATCGTCATCGTTGACTTCAGACTTTGACTTGTCGGATCCTTCTTCCTCT
GAAGGAGTTTTCCCCTCAGCCAATCCAATATTGTAAGCACGAAGAGTCTT
CTCATACTCCTCTTTCAACTTTTCTGCCCTCTCAACGTAAGGAGCCTTAT
CAGCAGTTGACAACGATTTCCATTCTTTGCCACCAGCTTTGCCAACCACA
GCAACGGATTTGTTGTTAGGATTCTCCTTCTTAAAAGTCTCTCTGAATTC
AGACATGAAAACGAAGAAAGCACTTGGAGGCCTCTTCGGTCTGTTAGGAT
CCTTGGAAGCCTTCTTCGACTGCTTTGTACCGGTTCCAGCGCCCTTTCGC
TTCAACCGGCTATCGGCGGGTTTGGCGACGGTGCTACCCTTAGGCATGGC
GGTTGGGG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR000910	High mobility group, HMG1/HMG2
IPR009071	HMG_box_dom

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