GR420685

EST Overview
NameGR420685
Unique NameGR420685
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length645
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR420685 vs. TrEMBL
Match: D7SWB4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_31.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022294001 PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 3.109e-9
Identity = 40/86 (46.51%), Postives = 47/86 (54.65%), Query Frame = 1
Query:   28 GYFTKDAFGEETNNYY---LGQGLISVVDFVGSICC*FITFPLMMNPVVFERYEL*RFSRYCLWLRWLFGCEWFTFGLVAPNFADF 276
            GYF   AFGEET +     LGQG +S++  +G     F TFPLMMNPV        R   YCLWLRW+         L+ PNFADF
Sbjct:  256 GYF---AFGEETKDIITTNLGQGPLSIMVQLGLCVNLFFTFPLMMNPVYEVMERRFRDGAYCLWLRWVAVLGVILVALMVPNFADF 338          
BLAST of GR420685 vs. TrEMBL
Match: D7U4R5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00023871001 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 6.925e-9
Identity = 41/87 (47.13%), Postives = 50/87 (57.47%), Query Frame = 1
Query:   28 GYFTKDAFGEETNNYY---LGQGLISVVDFVGSICC*FITFPLMMNPVVFERYEL*RFS-RYCLWLRWLFGCEWFTFGLVAPNFADF 276
            GYF   AFGE+T +     LG GL+S +  +G     F TFPLMMNPV +E  E   ++ RYCLWLRWL         L+ PNF DF
Sbjct:  285 GYF---AFGEDTKDIITANLGTGLVSFLVQLGLCVNLFFTFPLMMNPV-YEVVERRLYNGRYCLWLRWLLVLTVILVALLVPNFTDF 367          
BLAST of GR420685 vs. TrEMBL
Match: A5AMA6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043724 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 6.925e-9
Identity = 41/87 (47.13%), Postives = 50/87 (57.47%), Query Frame = 1
Query:   28 GYFTKDAFGEETNNYY---LGQGLISVVDFVGSICC*FITFPLMMNPVVFERYEL*RFS-RYCLWLRWLFGCEWFTFGLVAPNFADF 276
            GYF   AFGE+T +     LG GL+S +  +G     F TFPLMMNPV +E  E   ++ RYCLWLRWL         L+ PNF DF
Sbjct:   15 GYF---AFGEDTKDIITANLGTGLVSFLVQLGLCVNLFFTFPLMMNPV-YEVVERRLYNGRYCLWLRWLLVLTVILVALLVPNFTDF 97          
BLAST of GR420685 vs. TrEMBL
Match: B9S6V9_RICCO (Amino acid transporter, putative OS=Ricinus communis GN=RCOM_0874930 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 2.015e-8
Identity = 45/90 (50.00%), Postives = 51/90 (56.67%), Query Frame = 1
Query:   28 GYFTKDAFGEETNNYY---LGQGLISVVDFVGSICC*FITFPLMMNPV--VFERYEL*RF--SRYCLWLRWLFGCEWFTFGLVAPNFADF 276
            GYF   AFGEET +     LG+GL+S +   G     F TFPLMMNPV  V ER    RF  S YCLWLRW+         L+ PNFADF
Sbjct:  279 GYF---AFGEETKDIITTNLGRGLLSSLVQFGLCVNLFFTFPLMMNPVYEVAER----RFCGSSYCLWLRWVVVLLVSLVALLVPNFADF 361          
BLAST of GR420685 vs. TrEMBL
Match: B9MZ05_POPTR (Aromatic and neutral amino acid transporter OS=Populus trichocarpa GN=PtrANT2 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 2.015e-8
Identity = 44/90 (48.89%), Postives = 50/90 (55.56%), Query Frame = 1
Query:   28 GYFTKDAFGEETNNYY---LGQGLISVVDFVGSICC*FITFPLMMNPV--VFERYEL*RF--SRYCLWLRWLFGCEWFTFGLVAPNFADF 276
            GYF   AFG +T +     LG GLIS++  +G     F TFPLMMNPV  + ER    RF   RYCLWLRWL         L  PNFADF
Sbjct:  281 GYF---AFGNDTQDIITANLGPGLISLLVQLGLCINLFFTFPLMMNPVYEIVER----RFWGGRYCLWLRWLSVMLVTLVALTVPNFADF 363          
BLAST of GR420685 vs. TrEMBL
Match: B9HPX3_POPTR (Aromatic and neutral amino acid transporter OS=Populus trichocarpa GN=PtrANT3 PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 2.632e-8
Identity = 43/90 (47.78%), Postives = 51/90 (56.67%), Query Frame = 1
Query:   28 GYFTKDAFGEETNNYY---LGQGLISVVDFVGSICC*FITFPLMMNPV--VFERYEL*RF--SRYCLWLRWLFGCEWFTFGLVAPNFADF 276
            GYF   AFG +T +     LG GLIS++  +G     F TFPLMMNPV  + ER    RF   RYCLWLRW+         L+ PNFADF
Sbjct:  282 GYF---AFGNDTQDIITANLGPGLISLLVQLGLCINLFFTFPLMMNPVYEILER----RFWGGRYCLWLRWVSVLLVTLVALMVPNFADF 364          
BLAST of GR420685 vs. TrEMBL
Match: B9SMC5_RICCO (Amino acid transporter, putative OS=Ricinus communis GN=RCOM_0600380 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 4.489e-8
Identity = 43/90 (47.78%), Postives = 50/90 (55.56%), Query Frame = 1
Query:   28 GYFTKDAFGEETNNYY---LGQGLISVVDFVGSICC*FITFPLMMNPV--VFERYEL*RF--SRYCLWLRWLFGCEWFTFGLVAPNFADF 276
            GYF   AFG ET +     LG GLIS +  +G     F TFPLMM+PV  + ER    RF   RYCLWLRW+         L+ PNFADF
Sbjct:  287 GYF---AFGNETKDIITANLGAGLISSLVQLGLCINLFFTFPLMMHPVYEIVER----RFWGGRYCLWLRWVLVLAVSLVALLVPNFADF 369          
BLAST of GR420685 vs. TrEMBL
Match: B9H681_POPTR (Aromatic and neutral amino acid transporter (Fragment) OS=Populus trichocarpa GN=PtrANT1 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 4.489e-8
Identity = 54/149 (36.24%), Postives = 69/149 (46.31%), Query Frame = 1
Query:   28 GYFTKDAFGEETNNYY---LGQGLISVVDFVGSICC*FITFPLMMNPV--VFERYEL*RF--SRYCLWLRWLFGCEWFTFGLVAPNFADFXXXXXXXXXXXXXXXXPGFQGGGYVSLYFG*GCILSDGVVMVFFVAWIGSCSFTSVTEI 453
            GYF   AFGE+T +     LG GL+S +  +G     F TFPLMMNPV  V ER    RF  SRY +WLRW+         L+ PNFADF                P            G   +L DG  +VF V    + +++S+ EI
Sbjct:  259 GYF---AFGEDTKDIITTNLGPGLLSNLVQIGLCVNLFFTFPLMMNPVYEVVER----RFCDSRYSIWLRWVVVLGVSLVALLVPNFADFLSLVGSSVCCILGFVLPALFHLLVFKEELGWNGLLLDGAFVVFGVIIAVTGTWSSLMEI 400          
BLAST of GR420685 vs. TrEMBL
Match: Q9SVG0_ARATH (AT4g38250/F22I13_20 OS=Arabidopsis thaliana GN=AT4g38250 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.909e-7
Identity = 41/82 (50.00%), Postives = 46/82 (56.10%), Query Frame = 1
Query:   46 AFGEETNNYY---LGQGLISVVDFVGSICC*FITFPLMMNPVVFERYEL*RFSR--YCLWLRWLFGCEWFTFGLVAPNFADF 276
            AFGE+T +     LG GL+S V  +G     F TFPLMMNP VFE  E  RFSR  Y  WLRW+         L  PNFADF
Sbjct:  293 AFGEDTMDIITANLGAGLVSTVVQLGLCINLFFTFPLMMNP-VFEIVER-RFSRGMYSAWLRWVLVLAVTLVALFVPNFADF 372          
BLAST of GR420685 vs. TrEMBL
Match: Q8LAI4_ARATH (Putative amino acid transport protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.909e-7
Identity = 41/82 (50.00%), Postives = 46/82 (56.10%), Query Frame = 1
Query:   46 AFGEETNNYY---LGQGLISVVDFVGSICC*FITFPLMMNPVVFERYEL*RFSR--YCLWLRWLFGCEWFTFGLVAPNFADF 276
            AFGE+T +     LG GL+S V  +G     F TFPLMMNP VFE  E  RFSR  Y  WLRW+         L  PNFADF
Sbjct:  293 AFGEDTMDIITANLGAGLVSTVVQLGLCINLFFTFPLMMNP-VFEIVER-RFSRGMYSAWLRWVLVLAVTLVALFVPNFADF 372          
BLAST of GR420685 vs. TAIR peptide
Match: AT4G38250.1 (| Symbols: | Transmembrane amino acid transporter family protein | chr4:17935533-17936843 FORWARD LENGTH=436)

HSP 1 Score: 59.3066 bits (142), Expect = 2.056e-9
Identity = 41/82 (50.00%), Postives = 46/82 (56.10%), Query Frame = 1
Query:   46 AFGEETNNYY---LGQGLISVVDFVGSICC*FITFPLMMNPVVFERYEL*RFSR--YCLWLRWLFGCEWFTFGLVAPNFADF 276
            AFGE+T +     LG GL+S V  +G     F TFPLMMNP VFE  E  RFSR  Y  WLRW+         L  PNFADF
Sbjct:  293 AFGEDTMDIITANLGAGLVSTVVQLGLCINLFFTFPLMMNP-VFEIVER-RFSRGMYSAWLRWVLVLAVTLVALFVPNFADF 372          
BLAST of GR420685 vs. TAIR peptide
Match: AT2G42005.1 (| Symbols: | Transmembrane amino acid transporter family protein | chr2:17531323-17532564 REVERSE LENGTH=413)

HSP 1 Score: 57.7658 bits (138), Expect = 5.982e-9
Identity = 37/81 (45.68%), Postives = 47/81 (58.02%), Query Frame = 1
Query:   46 AFGEETNNYY---LGQGLISVVDFVGSICC*FITFPLMMNPVVFERYEL*RFS-RYCLWLRWLFGCEWFTFGLVAPNFADF 276
            AFG++T +     LG G++S +  +G     F TFPLMMNPV FE  E   +S  YC+WLRWL         L+ PNFADF
Sbjct:  272 AFGDDTMDIITANLGAGVVSSLVQLGLCINLFFTFPLMMNPV-FEIVERRFWSGMYCVWLRWLLVLAVTLVALLVPNFADF 351          
BLAST of GR420685 vs. TAIR peptide
Match: AT5G65990.1 (| Symbols: | Transmembrane amino acid transporter family protein | chr5:26394955-26396321 FORWARD LENGTH=427)

HSP 1 Score: 51.9878 bits (123), Expect = 3.282e-7
Identity = 35/82 (42.68%), Postives = 44/82 (53.66%), Query Frame = 1
Query:   46 AFGEETNNYY---LGQGLISVVDFVGSICC*FITFPLMMNPV--VFERYEL*RFSRYCLWLRWLFGCEWFTFGLVAPNFADF 276
            A+GEET +     LG G++S +  +G     F TFPLMM PV  V ER      SRY +W+RW          L+ PNFADF
Sbjct:  284 AYGEETKDIITTNLGTGVVSTLVQLGLAINLFFTFPLMMQPVYEVVERRLC--SSRYSVWVRWATVLVVTLVALLVPNFADF 363          
The following BLAST results are available for this feature:
BLAST of GR420685 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7SWB4_VITVI3.109e-946.51Whole genome shotgun sequence of line PN40024, sca... [more]
D7U4R5_VITVI6.925e-947.13Whole genome shotgun sequence of line PN40024, sca... [more]
A5AMA6_VITVI6.925e-947.13Putative uncharacterized protein OS=Vitis vinifera... [more]
B9S6V9_RICCO2.015e-850.00Amino acid transporter, putative OS=Ricinus commun... [more]
B9MZ05_POPTR2.015e-848.89Aromatic and neutral amino acid transporter OS=Pop... [more]
B9HPX3_POPTR2.632e-847.78Aromatic and neutral amino acid transporter OS=Pop... [more]
B9SMC5_RICCO4.489e-847.78Amino acid transporter, putative OS=Ricinus commun... [more]
B9H681_POPTR4.489e-836.24Aromatic and neutral amino acid transporter (Fragm... [more]
Q9SVG0_ARATH2.909e-750.00AT4g38250/F22I13_20 OS=Arabidopsis thaliana GN=AT4... [more]
Q8LAI4_ARATH2.909e-750.00Putative amino acid transport protein OS=Arabidops... [more]
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BLAST of GR420685 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT4G38250.12.056e-950.00| Symbols: | Transmembrane amino acid transporter... [more]
AT2G42005.15.982e-945.68| Symbols: | Transmembrane amino acid transporter... [more]
AT5G65990.13.282e-742.68| Symbols: | Transmembrane amino acid transporter... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013057Amino acid transporter, transmembranePFAMPF01490Aa_transcoord: 8..49
score: 4.9
NoneNo IPR availableSEGsegsegcoord: 31..46
score
NoneNo IPR availableSEGsegsegcoord: 1..20
score: NAcoord: 28..40
score
NoneNo IPR availableSEGsegsegcoord: 10..31
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR420685 ID=GR420685; Name=GR420685; organism=Cicer arietinum; type=EST; length=645bp
GTGCTTTGATAATATTTGGTGCTTTTAGGTTACTTTACAAAGGATGCATT
TGGTGAAGAAACTAATAATTATTATTTAGGTCAAGGTTTGATAAGTGTTG
TGGACTTTGTTGGTTCAATTTGTTGTTAATTTATTACTTTTCCTTTGATG
ATGAATCCTGTTGTGTTTGAGAGATATGAGTTGTGAAGGTTTTCTAGGTA
TTGTTTGTGGTTGAGGTGGTTGTTTGGTTGTGAGTGGTTTACTTTTGGTT
TGGTGGCGCCTAATTTTGCTGATTTTCTTTCACTTGTTGGAAGCAGTGTG
TCTTGGAGTGTTGTTTTTGTGTTGCCTGGTTTTCAAGGAGGAGGCTATGT
TTCATTGTATTTTGGATAGGGATGCATTCTTTCTGATGGGGTAGTTATGG
TTTTTTTTGTTGCTTGGATTGGAAGTTGTTCTTTTACTTCTGTCACAGAG
ATTCTTTCTCCTAAGGCCTAGAATTTTACTAAAAGGCTCAGTTTGTGACA
GATGAAAGCTTCTTTGAATTGAGCAACGTCTTGATGGTTTTCAATGGGTC
ATTGGATTTGATACTGGTATCAAGTGTATGATTTTTTTGTTGATTGAATC
CATTGTATCTATATGTTTTTCTTTTATGGAACCTACAAATAAAAA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR013057AA_transpt_TM