FE672010
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FE672010 vs. TrEMBL
Match: D3YBD2_TRIRP (Transcription initiation factor OS=Trifolium repens PE=4 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.611e-22 Identity = 53/65 (81.54%), Postives = 60/65 (92.31%), Query Frame = -3 Query: 269 GPTSHGNSAAARKFGKNHSPGCQTRVARSISVKDVIAVLEREPQMSKSSLLYQLYERIHADASNE 463 GPTS GNSAAARKFGKN SPG QTR+AR+ISVKDVIAVLEREPQMSKSSLLY++++RIH+D S E Sbjct: 870 GPTSLGNSAAARKFGKNQSPGSQTRIARNISVKDVIAVLEREPQMSKSSLLYRMHDRIHSDTSTE 934
BLAST of FE672010 vs. TrEMBL
Match: B9S3E1_RICCO (Transcription initiation factor, putative OS=Ricinus communis GN=RCOM_0732980 PE=4 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.785e-13 Identity = 41/65 (63.08%), Postives = 49/65 (75.38%), Query Frame = -3 Query: 248 SAAARKFGKNHSPGCQTRVARSISVKDVIAVLEREPQMSKSSLLYQLYERIHADASNE*DNTMLI 442 S AR+FG+N S QTR ARSISVKDVIA LEREPQMSKS+L+Y+LYER+ +DA E L+ Sbjct: 825 STGARRFGRNQSVAPQTRPARSISVKDVIAALEREPQMSKSTLIYRLYERMQSDALIEYSTASLL 889
BLAST of FE672010 vs. TrEMBL
Match: B9GNQ9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_551795 PE=4 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.046e-13 Identity = 39/64 (60.94%), Postives = 50/64 (78.12%), Query Frame = -3 Query: 269 PTSHGNSAAARKFGKNHSPGCQTRVARSISVKDVIAVLEREPQMSKSSLLYQLYERIHADASNE 460 P S A RKFG+N + QT+V R+I+VKDV+AVLEREPQMS+S+L+YQLYERI +DA+ E Sbjct: 316 PAVPSASGAVRKFGRNQAIVPQTKVVRTITVKDVMAVLEREPQMSRSTLIYQLYERIRSDAAPE 379
BLAST of FE672010 vs. TrEMBL
Match: B9R722_RICCO (Transcription initiation factor, putative OS=Ricinus communis GN=RCOM_1588000 PE=4 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.367e-12 Identity = 37/58 (63.79%), Postives = 46/58 (79.31%), Query Frame = -3 Query: 269 SAAARKFGKNHSPGCQTRVARSISVKDVIAVLEREPQMSKSSLLYQLYERIHADASNE 442 S RK G+N + Q++VARSISVKDVIA LEREPQMSKS+L+Y+LYER+ +DA E Sbjct: 868 STGVRKVGRNQAFTPQSKVARSISVKDVIAALEREPQMSKSTLIYRLYERVQSDAPTE 925
BLAST of FE672010 vs. TrEMBL
Match: B9IBU8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1097911 PE=4 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 9.797e-12 Identity = 36/62 (58.06%), Postives = 49/62 (79.03%), Query Frame = -3 Query: 269 SHGNSAAARKFGKNHSPGCQTRVARSISVKDVIAVLEREPQMSKSSLLYQLYERIHADASNE 454 S + + RK G+N + QT+V R+ISVKDV++VLEREPQMS+S+L+YQLYERI +DA+ E Sbjct: 814 SSASGKSGRKCGRNQAIVPQTKVVRTISVKDVMSVLEREPQMSRSTLIYQLYERIRSDATAE 875
BLAST of FE672010 vs. TrEMBL
Match: A5ARH4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002028 PE=4 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.862e-11 Identity = 34/54 (62.96%), Postives = 47/54 (87.04%), Query Frame = -3 Query: 269 RKFGKNHSPGCQTRVARSISVKDVIAVLEREPQMSKSSLLYQLYERIHADASNE 430 RKFG+N++ QTRVAR+I+VKDVI+VLEREPQM KS+L+Y+LYE++ + A+ E Sbjct: 853 RKFGRNNAIVPQTRVARNITVKDVISVLEREPQMLKSTLIYRLYEKMRSGAATE 906
BLAST of FE672010 vs. TrEMBL
Match: Q9FMH0_ARATH (Gb|AAF24960.1 OS=Arabidopsis thaliana PE=4 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 6.572e-8 Identity = 28/50 (56.00%), Postives = 37/50 (74.00%), Query Frame = -3 Query: 296 NSAAARKFGKNHSPGCQTRVARSISVKDVIAVLEREPQMSKSSLLYQLYE 445 + R+ GKN Q +V R+ISVKDV+AVLEREPQMSKS+L+Y+L + Sbjct: 640 SGTGGRRVGKNQGSSLQPKVVRTISVKDVVAVLEREPQMSKSTLMYRLIQ 689
BLAST of FE672010 vs. TrEMBL
Match: Q6SJR0_ARATH (Putative uncharacterized protein At5g43130 (Fragment) OS=Arabidopsis thaliana GN=TAF4B PE=2 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 6.572e-8 Identity = 28/50 (56.00%), Postives = 37/50 (74.00%), Query Frame = -3 Query: 296 NSAAARKFGKNHSPGCQTRVARSISVKDVIAVLEREPQMSKSSLLYQLYE 445 + R+ GKN Q +V R+ISVKDV+AVLEREPQMSKS+L+Y+L + Sbjct: 774 SGTGGRRVGKNQGSSLQPKVVRTISVKDVVAVLEREPQMSKSTLMYRLIQ 823
BLAST of FE672010 vs. TrEMBL
Match: D7MQ05_ARALY (Transcription initiation factor OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_917373 PE=4 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 6.572e-8 Identity = 28/50 (56.00%), Postives = 37/50 (74.00%), Query Frame = -3 Query: 296 NSAAARKFGKNHSPGCQTRVARSISVKDVIAVLEREPQMSKSSLLYQLYE 445 + R+ GKN Q +V R+ISVKDV+AVLEREPQMSKS+L+Y+L + Sbjct: 775 SGTGGRRVGKNQGSSLQPKVVRTISVKDVVAVLEREPQMSKSTLMYRLIQ 824
BLAST of FE672010 vs. TrEMBL
Match: D7SXS7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_91.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00037863001 PE=4 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.121e-7 Identity = 27/51 (52.94%), Postives = 40/51 (78.43%), Query Frame = -3 Query: 275 KFGKNHSPGCQTRVARSISVKDVIAVLEREPQMSKSSLLYQLYERIHADAS 427 + G+N S Q++V RS+S+KD++A LEREPQM+KS+L +L ERIH+D + Sbjct: 30 RVGENQSARPQSKVVRSVSIKDLLATLEREPQMAKSALTQRLRERIHSDGT 80
BLAST of FE672010 vs. TAIR peptide
Match: AT5G43130.2 (| Symbols: TAF4 | TBP-associated factor 4 | chr5:17315608-17321144 REVERSE LENGTH=852) HSP 1 Score: 61.6178 bits (148), Expect = 2.186e-10 Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = -3 Query: 296 AAARKFGKNHSPGCQTRVARSISVKDVIAVLEREPQMSKSSLLYQLYE 439 A R+ GKN Q +V R+ISVKDV+AVLEREPQMSKS+L+Y+L + Sbjct: 805 AGGRRVGKNQGSSLQPKVVRTISVKDVVAVLEREPQMSKSTLMYRLIQ 852
BLAST of FE672010 vs. TAIR peptide
Match: AT5G43130.1 (| Symbols: TAF4, TAF4B | TBP-associated factor 4 | chr5:17315608-17321144 REVERSE LENGTH=823) HSP 1 Score: 60.4622 bits (145), Expect = 4.870e-10 Identity = 28/50 (56.00%), Postives = 37/50 (74.00%), Query Frame = -3 Query: 296 NSAAARKFGKNHSPGCQTRVARSISVKDVIAVLEREPQMSKSSLLYQLYE 445 + R+ GKN Q +V R+ISVKDV+AVLEREPQMSKS+L+Y+L + Sbjct: 774 SGTGGRRVGKNQGSSLQPKVVRTISVKDVVAVLEREPQMSKSTLMYRLIQ 823
BLAST of FE672010 vs. TAIR peptide
Match: AT1G27720.1 (| Symbols: TAF4, TAF4B | TBP-associated factor 4B | chr1:9643351-9647376 REVERSE LENGTH=720) HSP 1 Score: 58.151 bits (139), Expect = 2.417e-9 Identity = 30/49 (61.22%), Postives = 39/49 (79.59%), Query Frame = -3 Query: 281 KFGKNHSPGCQTRVARSISVKDVIAVLEREPQMSKSSLLYQLYERIHAD 427 +FGKN +V RSISVKDVIAV+E+EPQMS+S+LLY++Y RI +D Sbjct: 674 QFGKNQG---LPKVVRSISVKDVIAVVEKEPQMSRSTLLYRVYNRICSD 719 The following BLAST results are available for this feature:
BLAST of FE672010 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of FE672010 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FE672010 ID=FE672010; Name=FE672010; organism=Cicer arietinum; type=EST; length=465bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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