GO660544

EST Overview


Name	GO660544
Unique Name	GO660544
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	220

Libraries


Library Name	Type
LIBEST_024573 Chickpea cv. WR315 infected by Fusarium oxysporum f. sp. ciceri (Race 1)	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GO660544 vs. TrEMBL
Match: Q9SGH8_ARATH (T13O15.4 protein OS=Arabidopsis thaliana GN=At3g01400 PE=4 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.709e-19
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1

Query:   13 EFPTASSESRRLLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAMEIR 159
            EFPTASSESRRLLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAMEIR
Sbjct:   40 EFPTASSESRRLLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAMEIR 88

[Close]

BLAST of GO660544 vs. TrEMBL
Match: Q944I3_ARATH (AT3g01400/T13O15_4 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.709e-19
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1

Query:   13 EFPTASSESRRLLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAMEIR 159
            EFPTASSESRRLLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAMEIR
Sbjct:   40 EFPTASSESRRLLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAMEIR 88

[Close]

BLAST of GO660544 vs. TrEMBL
Match: Q8LB86_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.709e-19
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1

Query:   13 EFPTASSESRRLLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAMEIR 159
            EFPTASSESRRLLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAMEIR
Sbjct:   40 EFPTASSESRRLLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAMEIR 88

[Close]

BLAST of GO660544 vs. TrEMBL
Match: B9R706_RICCO (E3 ubiquitin ligase PUB14, putative OS=Ricinus communis GN=RCOM_1587530 PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.718e-11
Identity = 38/49 (77.55%), Postives = 42/49 (85.71%), Query Frame = 1

Query:   13 EFPTASSESRRLLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAMEIR 159
            EFPTASSESRRLL++CA+ENSDD I  LV  L+S  SIDEQKQAAMEIR
Sbjct:   38 EFPTASSESRRLLIACAAENSDDFIRQLVLDLESC-SIDEQKQAAMEIR 85

[Close]

BLAST of GO660544 vs. TrEMBL
Match: B9GNP8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_551785 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.342e-11
Identity = 37/49 (75.51%), Postives = 43/49 (87.76%), Query Frame = 1

Query:   13 EFPTASSESRRLLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAMEIR 159
            EFP ++S+SRRLLLSCA++NSDDLI  LVS L+S  SIDEQKQAAMEIR
Sbjct:   40 EFPASASQSRRLLLSCAADNSDDLIRQLVSDLESC-SIDEQKQAAMEIR 87

[Close]

BLAST of GO660544 vs. TrEMBL
Match: Q8LGC7_ARATH (Armadillo/beta-catenin repeat family protein OS=Arabidopsis thaliana GN=At5g58680 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.082e-10
Identity = 35/51 (68.63%), Postives = 44/51 (86.27%), Query Frame = 1

Query:   13 EFPTASSESR--RLLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAMEIR 159
            EFPT +SESR  +L LSCA +NSDD+I +L++HL+SS SI+EQKQAAMEIR
Sbjct:   36 EFPTTTSESRQRKLFLSCAVDNSDDVIRNLITHLESSSSIEEQKQAAMEIR 86

[Close]

BLAST of GO660544 vs. TrEMBL
Match: Q8GWD6_ARATH (Putative uncharacterized protein At5g58680/mzn1_130 OS=Arabidopsis thaliana GN=At5g58680/mzn1_130 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.082e-10
Identity = 35/51 (68.63%), Postives = 44/51 (86.27%), Query Frame = 1

Query:   13 EFPTASSESR--RLLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAMEIR 159
            EFPT +SESR  +L LSCA +NSDD+I +L++HL+SS SI+EQKQAAMEIR
Sbjct:   36 EFPTTTSESRQRKLFLSCAVDNSDDVIRNLITHLESSSSIEEQKQAAMEIR 86

[Close]

BLAST of GO660544 vs. TrEMBL
Match: D7MQG4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_919073 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.480e-9
Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 1

Query:   13 EFPTASSESR--RLLLSCASENSDDLINHLVSHLD-SSYSIDEQKQAAMEIR 159
            +FPT SSESR  +L LSCA +NSDDLI  L++HL+ SS SI+EQKQAAMEIR
Sbjct:   37 DFPTTSSESRQPKLFLSCAVDNSDDLIRCLITHLESSSSSIEEQKQAAMEIR 88

[Close]

BLAST of GO660544 vs. TAIR peptide
Match: AT3G01400.1 (| Symbols: | ARM repeat superfamily protein | chr3:151920-152987 FORWARD LENGTH=355)

HSP 1 Score: 97.8265 bits (242), Expect = 1.427e-21
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1

Query:   13 EFPTASSESRRLLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAMEIR 159
            EFPTASSESRRLLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAMEIR
Sbjct:   40 EFPTASSESRRLLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAMEIR 88

[Close]

BLAST of GO660544 vs. TAIR peptide
Match: AT5G58680.1 (| Symbols: | ARM repeat superfamily protein | chr5:23708247-23709320 REVERSE LENGTH=357)

HSP 1 Score: 69.707 bits (169), Expect = 4.162e-13
Identity = 35/51 (68.63%), Postives = 44/51 (86.27%), Query Frame = 1

Query:   13 EFPTASSESR--RLLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAMEIR 159
            EFPT +SESR  +L LSCA +NSDD+I +L++HL+SS SI+EQKQAAMEIR
Sbjct:   36 EFPTTTSESRQRKLFLSCAVDNSDDVIRNLITHLESSSSIEEQKQAAMEIR 86

The following BLAST results are available for this feature:

BLAST of GO660544 vs. TrEMBL
BLAST of GO660544 vs. TAIR peptide

BLAST of GO660544 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 8


Match Name	E-value	Identity	Description
Q9SGH8_ARATH	3.709e-19	100.00	T13O15.4 protein OS=Arabidopsis thaliana GN=At3g01...	[more]
Q944I3_ARATH	3.709e-19	100.00	AT3g01400/T13O15_4 OS=Arabidopsis thaliana PE=2 SV...	[more]
Q8LB86_ARATH	3.709e-19	100.00	Putative uncharacterized protein OS=Arabidopsis th...	[more]
B9R706_RICCO	3.718e-11	77.55	E3 ubiquitin ligase PUB14, putative OS=Ricinus com...	[more]
B9GNP8_POPTR	6.342e-11	75.51	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q8LGC7_ARATH	1.082e-10	68.63	Armadillo/beta-catenin repeat family protein OS=Ar...	[more]
Q8GWD6_ARATH	1.082e-10	68.63	Putative uncharacterized protein At5g58680/mzn1_13...	[more]
D7MQG4_ARALY	3.480e-9	69.23	Putative uncharacterized protein OS=Arabidopsis ly...	[more]

BLAST of GO660544 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G01400.1	1.427e-21	100.00	\| Symbols: \| ARM repeat superfamily protein \| chr...	[more]
AT5G58680.1	4.162e-13	68.63	\| Symbols: \| ARM repeat superfamily protein \| chr...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 45..64 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GO660544 ID=GO660544; Name=GO660544; organism=Cicer arietinum; type=EST; length=220bp
TACCAATTCACCGAATTTCCGACCGCGAGCAGCGAAAGCCGCCGCCTGCT
GCTGAGCTGCGCGAGCGAAAACAGCGATGATCTGATTAACCATCTGGTGA
GCCATCTGGATAGCAGCTATAGCATTGATGAACAGAAACAGGCGGCGATG
GAAATTCGCCACCACCACACGTCGGAATGCCACTAACCTCTGATCTTCAC
ATTGTGTATTAGTTACTCAG

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