GR409933

EST Overview
NameGR409933
Unique NameGR409933
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length714
Libraries
Library NameType
LIBEST_024779 ICC1882 Slow drought stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Homology
BLAST of GR409933 vs. TrEMBL
Match: B9RIS2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1582000 PE=4 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.624e-13
Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = -1
Query:  310 EEDLFMASLICNMDVDCGKLLVCKPDLDCVKTLQYDTELN 429
            EED+FMASLICNMD DC KLLVCK DLDCVKTL +DTE N
Sbjct:  346 EEDMFMASLICNMDADCEKLLVCKMDLDCVKTLHFDTEAN 385          

HSP 2 Score: 24.6386 bits (52), Expect = 6.624e-13
Identity = 11/28 (39.29%), Postives = 16/28 (57.14%), Query Frame = -2
Query:  171 SDVSTTYFMGNSPFLFLDEFIYMLPLLG 254
            +D S T   G SPF  LD+F+  +  +G
Sbjct:  397 NDASMTCTTGKSPFPSLDKFVESIATVG 424          
BLAST of GR409933 vs. TrEMBL
Match: Q9FLY1_ARATH (Genomic DNA, chromosome 5, P1 clone:MXC20 OS=Arabidopsis thaliana GN=At5g52800 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 8.566e-9
Identity = 37/95 (38.95%), Postives = 48/95 (50.53%), Query Frame = -1
Query:  160 K*QSEEDLFMASLICNMDVDCGKLLVCKPDLDCVKTLQYDTELNC-NAGNSGHIHPIYIKYLNK*CFNNILHGKLTIPISG*IYIYAASVGNIPG 441
            K   E D+FM SLICN++ DC KLLVCK + DC+KTL +DTE+N  N     +     +         +   GK   P         AS GN+PG
Sbjct:  345 KDMGERDVFMTSLICNVESDCEKLLVCKMESDCMKTLCFDTEVNSNNLVRDQNAQKFQLNASTSDMSTSYFGGKSPFPQLDQFIESTASTGNVPG 439          
BLAST of GR409933 vs. TrEMBL
Match: Q5XV02_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At5g52800 PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 8.566e-9
Identity = 37/95 (38.95%), Postives = 48/95 (50.53%), Query Frame = -1
Query:  160 K*QSEEDLFMASLICNMDVDCGKLLVCKPDLDCVKTLQYDTELNC-NAGNSGHIHPIYIKYLNK*CFNNILHGKLTIPISG*IYIYAASVGNIPG 441
            K   E D+FM SLICN++ DC KLLVCK + DC+KTL +DTE+N  N     +     +         +   GK   P         AS GN+PG
Sbjct:  354 KDMGERDVFMTSLICNVESDCEKLLVCKMESDCMKTLCFDTEVNSNNLVRDQNAQKFQLNASTSDMSTSYFGGKSPFPQLDQFIESTASTGNVPG 448          
BLAST of GR409933 vs. TrEMBL
Match: Q5XV01_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At5g52800 PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 8.566e-9
Identity = 37/95 (38.95%), Postives = 48/95 (50.53%), Query Frame = -1
Query:  160 K*QSEEDLFMASLICNMDVDCGKLLVCKPDLDCVKTLQYDTELNC-NAGNSGHIHPIYIKYLNK*CFNNILHGKLTIPISG*IYIYAASVGNIPG 441
            K   E D+FM SLICN++ DC KLLVCK + DC+KTL +DTE+N  N     +     +         +   GK   P         AS GN+PG
Sbjct:  354 KDMGERDVFMTSLICNVESDCEKLLVCKMESDCMKTLCFDTEVNSNNLVRDQNAQKFQLNASTSDMSTSYFGGKSPFPQLDQFIESTASTGNVPG 448          
BLAST of GR409933 vs. TrEMBL
Match: D7MS85_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495344 PE=4 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 1.461e-8
Identity = 37/95 (38.95%), Postives = 48/95 (50.53%), Query Frame = -1
Query:  160 K*QSEEDLFMASLICNMDVDCGKLLVCKPDLDCVKTLQYDTELNC-NAGNSGHIHPIYIKYLNK*CFNNILHGKLTIPISG*IYIYAASVGNIPG 441
            K   E D+FM SLICN++ DC KLLVCK + DC+KTL +DTE+N  N     +     +         +   GK   P         AS GN+PG
Sbjct:  354 KDMGEPDVFMTSLICNIESDCEKLLVCKMESDCMKTLCFDTEVNSNNLVRDQNAQRFQLDACTSDMSTSYFGGKSPFPQLDQFVESTASTGNVPG 448          
BLAST of GR409933 vs. TrEMBL
Match: Q69RL2_ORYSJ (Putative uncharacterized protein P0003B09.27 OS=Oryza sativa subsp. japonica GN=P0003B09.27 PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 8.017e-7
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = -1
Query:  316 K*QSEEDLFMASLICNMDVDCGKLLVCKPDLDCVKTLQYDTE 441
            K  S+++LFM SLIC +D DC KLL CK DLDC KTL +D+E
Sbjct:  346 KNMSDKELFMESLICRLDDDCHKLLTCKLDLDCKKTLHFDSE 387          
BLAST of GR409933 vs. TrEMBL
Match: B9FX45_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_24177 PE=4 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 8.017e-7
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = -1
Query:  316 K*QSEEDLFMASLICNMDVDCGKLLVCKPDLDCVKTLQYDTE 441
            K  S+++LFM SLIC +D DC KLL CK DLDC KTL +D+E
Sbjct:  346 KNMSDKELFMESLICRLDDDCHKLLTCKLDLDCKKTLHFDSE 387          
BLAST of GR409933 vs. TAIR peptide
Match: AT5G52800.3 (| Symbols: | DNA primases | chr5:21396053-21399419 FORWARD LENGTH=614)

HSP 1 Score: 64.6994 bits (156), Expect = 5.780e-11
Identity = 37/95 (38.95%), Postives = 48/95 (50.53%), Query Frame = -1
Query:  160 K*QSEEDLFMASLICNMDVDCGKLLVCKPDLDCVKTLQYDTELNC-NAGNSGHIHPIYIKYLNK*CFNNILHGKLTIPISG*IYIYAASVGNIPG 441
            K   E D+FM SLICN++ DC KLLVCK + DC+KTL +DTE+N  N     +     +         +   GK   P         AS GN+PG
Sbjct:  354 KDMGERDVFMTSLICNVESDCEKLLVCKMESDCMKTLCFDTEVNSNNLVRDQNAQKFQLNASTSDMSTSYFGGKSPFPQLDQFIESTASTGNVPG 448          
BLAST of GR409933 vs. TAIR peptide
Match: AT5G52800.2 (| Symbols: | DNA primases | chr5:21396053-21398559 FORWARD LENGTH=450)

HSP 1 Score: 64.6994 bits (156), Expect = 5.780e-11
Identity = 37/95 (38.95%), Postives = 48/95 (50.53%), Query Frame = -1
Query:  160 K*QSEEDLFMASLICNMDVDCGKLLVCKPDLDCVKTLQYDTELNC-NAGNSGHIHPIYIKYLNK*CFNNILHGKLTIPISG*IYIYAASVGNIPG 441
            K   E D+FM SLICN++ DC KLLVCK + DC+KTL +DTE+N  N     +     +         +   GK   P         AS GN+PG
Sbjct:  354 KDMGERDVFMTSLICNVESDCEKLLVCKMESDCMKTLCFDTEVNSNNLVRDQNAQKFQLNASTSDMSTSYFGGKSPFPQLDQFIESTASTGNVPG 448          
BLAST of GR409933 vs. TAIR peptide
Match: AT5G52800.1 (| Symbols: | DNA primases | chr5:21396053-21398813 FORWARD LENGTH=506)

HSP 1 Score: 64.6994 bits (156), Expect = 5.780e-11
Identity = 37/95 (38.95%), Postives = 48/95 (50.53%), Query Frame = -1
Query:  160 K*QSEEDLFMASLICNMDVDCGKLLVCKPDLDCVKTLQYDTELNC-NAGNSGHIHPIYIKYLNK*CFNNILHGKLTIPISG*IYIYAASVGNIPG 441
            K   E D+FM SLICN++ DC KLLVCK + DC+KTL +DTE+N  N     +     +         +   GK   P         AS GN+PG
Sbjct:  354 KDMGERDVFMTSLICNVESDCEKLLVCKMESDCMKTLCFDTEVNSNNLVRDQNAQKFQLNASTSDMSTSYFGGKSPFPQLDQFIESTASTGNVPG 448          
The following BLAST results are available for this feature:
BLAST of GR409933 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 7
Match NameE-valueIdentityDescription
B9RIS2_RICCO6.624e-1382.50Putative uncharacterized protein OS=Ricinus commun... [more]
Q9FLY1_ARATH8.566e-938.95Genomic DNA, chromosome 5, P1 clone:MXC20 OS=Arabi... [more]
Q5XV02_ARATH8.566e-938.95Putative uncharacterized protein OS=Arabidopsis th... [more]
Q5XV01_ARATH8.566e-938.95Putative uncharacterized protein OS=Arabidopsis th... [more]
D7MS85_ARALY1.461e-838.95Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q69RL2_ORYSJ8.017e-761.90Putative uncharacterized protein P0003B09.27 OS=Or... [more]
B9FX45_ORYSJ8.017e-761.90Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of GR409933 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G52800.35.780e-1138.95| Symbols: | DNA primases | chr5:21396053-2139941... [more]
AT5G52800.25.780e-1138.95| Symbols: | DNA primases | chr5:21396053-2139855... [more]
AT5G52800.15.780e-1138.95| Symbols: | DNA primases | chr5:21396053-2139881... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR409933 ID=GR409933; Name=GR409933; organism=Cicer arietinum; type=EST; length=714bp
CCTTAACAAATATAGCAACAATAACTAATTATTAATATAAAAGTATAAAA
TAGTTTACACCAACAACAAAACTTAAACTAGTAGTCAAAGTGTCAAAACA
TTCTAAAATCTTATAGATAAACTAATGAAGCATACAAAACCCGTGCTTTG
ACAGCTATCACCTGGTATATTCCCAACAGAGGCAGCATATATATAAATTC
ATCCAGAAATAGGAATGGTGAGTTTCCCATGAAGTATGTTGTTGAAACAT
CACTTGTTCAAGTATTTAATGTAAATTGGATGAATATGGCCAGAGTTTCC
AGCATTACAATTCAACTCTGTATCATACTGCAGAGTCTTCACACAATCTA
AGTCTGGTTTGCAGACCAGAAGCTTTCCACAATCAACATCCATGTTGCAG
ATCAAGGAAGCCATGAACAAGTCTTCTTCACTCTGTCACTTAAAGACACC
AAAGCTGAAAAATGACTAAGTGACAATAAATATTGCACAAACCATTTAAA
GGCAAAATGTAGTCATAAATACAGCAGTTTGCTCATGGTAATGCATGCAT
TGTTGGCTTTCTTCAAATTGAATAGAAAATCAAATATTGGTCGAGAACTG
ACAAAATGCATGCTATAACCCTACTACATGACAAATTGAGATAACCCTAT
AATGAAGTACAAATCACAAAATGAGATGACTAGATATTTAGAATTGCAAA
GAAATATTGAAATG
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