GR421085
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR421085 vs. SwissProt
Match: H2A1_MEDTR (Probable histone H2A.1 OS=Medicago truncatula GN=MtrDRAFT_AC149210g1v1 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 3.193e-20 Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVGTGAPVYLAAVLEY A+VLELAGNAARDNKKNR Sbjct: 50 RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR 85 HSP 2 Score: 42.743 bits (99), Expect = 3.193e-20 Identity = 26/38 (68.42%), Postives = 27/38 (71.05%), Query Frame = -2 Query: 244 IIPRHVLLAVRNDEELGKLLV-------MLLPINTNPI 336 IIPRHVLLAVRNDEELGKLL +LP N NPI Sbjct: 86 IIPRHVLLAVRNDEELGKLLAGVTIAHGGVLP-NINPI 122 HSP 3 Score: 29.261 bits (64), Expect = 3.193e-20 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRIGRYLKK Sbjct: 33 FPVGRIGRYLKK 44
BLAST of GR421085 vs. SwissProt
Match: H2A2_MEDTR (Probable histone H2A.2 OS=Medicago truncatula GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.124e-20 Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVGTGAPVYLAAVLEY A+VLELAGNAARDNKKNR Sbjct: 51 RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR 86 HSP 2 Score: 42.3578 bits (98), Expect = 4.124e-20 Identity = 20/20 (100.00%), Postives = 20/20 (100.00%), Query Frame = -2 Query: 277 IIPRHVLLAVRNDEELGKLL 336 IIPRHVLLAVRNDEELGKLL Sbjct: 87 IIPRHVLLAVRNDEELGKLL 106 HSP 3 Score: 29.261 bits (64), Expect = 4.124e-20 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRIGRYLKK Sbjct: 34 FPVGRIGRYLKK 45
BLAST of GR421085 vs. SwissProt
Match: H2A6_ORYSJ (Probable histone H2A.6 OS=Oryza sativa subsp. japonica GN=Os05g0113900 PE=2 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 5.334e-20 Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVGTGAPVYLAAVLEY A+VLELAGNAARDNKKNR Sbjct: 53 RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR 88 HSP 2 Score: 41.9726 bits (97), Expect = 5.334e-20 Identity = 19/20 (95.00%), Postives = 20/20 (100.00%), Query Frame = -2 Query: 277 IIPRHVLLAVRNDEELGKLL 336 IIPRHVLLA+RNDEELGKLL Sbjct: 89 IIPRHVLLAIRNDEELGKLL 108 HSP 3 Score: 29.261 bits (64), Expect = 5.334e-20 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRIGRYLKK Sbjct: 36 FPVGRIGRYLKK 47
BLAST of GR421085 vs. SwissProt
Match: H2A6_ORYSI (Probable histone H2A.6 OS=Oryza sativa subsp. indica GN=OsI_017523 PE=3 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 5.334e-20 Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVGTGAPVYLAAVLEY A+VLELAGNAARDNKKNR Sbjct: 53 RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR 88 HSP 2 Score: 41.9726 bits (97), Expect = 5.334e-20 Identity = 19/20 (95.00%), Postives = 20/20 (100.00%), Query Frame = -2 Query: 277 IIPRHVLLAVRNDEELGKLL 336 IIPRHVLLA+RNDEELGKLL Sbjct: 89 IIPRHVLLAIRNDEELGKLL 108 HSP 3 Score: 29.261 bits (64), Expect = 5.334e-20 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRIGRYLKK Sbjct: 36 FPVGRIGRYLKK 47
BLAST of GR421085 vs. SwissProt
Match: H2A5_ORYSJ (Probable histone H2A.5 OS=Oryza sativa subsp. japonica GN=Os01g0502700 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 6.901e-20 Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 R+GTGAPVYLAAVLEY A+VLELAGNAARDNKKNR Sbjct: 56 RIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR 91 HSP 2 Score: 41.9726 bits (97), Expect = 6.901e-20 Identity = 19/20 (95.00%), Postives = 20/20 (100.00%), Query Frame = -2 Query: 277 IIPRHVLLAVRNDEELGKLL 336 IIPRHVLLA+RNDEELGKLL Sbjct: 92 IIPRHVLLAIRNDEELGKLL 111 HSP 3 Score: 29.261 bits (64), Expect = 6.901e-20 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRIGRYLKK Sbjct: 39 FPVGRIGRYLKK 50
BLAST of GR421085 vs. SwissProt
Match: H2A5_ORYSI (Probable histone H2A.5 OS=Oryza sativa subsp. indica GN=OsI_002060 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 6.901e-20 Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 R+GTGAPVYLAAVLEY A+VLELAGNAARDNKKNR Sbjct: 56 RIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR 91 HSP 2 Score: 41.9726 bits (97), Expect = 6.901e-20 Identity = 19/20 (95.00%), Postives = 20/20 (100.00%), Query Frame = -2 Query: 277 IIPRHVLLAVRNDEELGKLL 336 IIPRHVLLA+RNDEELGKLL Sbjct: 92 IIPRHVLLAIRNDEELGKLL 111 HSP 3 Score: 29.261 bits (64), Expect = 6.901e-20 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRIGRYLKK Sbjct: 39 FPVGRIGRYLKK 50
BLAST of GR421085 vs. SwissProt
Match: H2A3_MEDTR (Probable histone H2A.3 OS=Medicago truncatula PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.932e-20 Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVGTGAPVYLAAVLEY A+VLELAGNAARDNKKNR Sbjct: 52 RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR 87 HSP 2 Score: 41.5874 bits (96), Expect = 6.932e-20 Identity = 25/38 (65.79%), Postives = 27/38 (71.05%), Query Frame = -2 Query: 244 IIPRHVLLAVRNDEELGKLLV-------MLLPINTNPI 336 IIPRH+LLAVRNDEELGKLL +LP N NPI Sbjct: 88 IIPRHLLLAVRNDEELGKLLAGVTIAHGGVLP-NINPI 124 HSP 3 Score: 29.261 bits (64), Expect = 6.932e-20 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRIGRYLKK Sbjct: 35 FPVGRIGRYLKK 46
BLAST of GR421085 vs. SwissProt
Match: H2A4_ORYSJ (Probable histone H2A.4 OS=Oryza sativa subsp. japonica GN=Os05g0461400 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 1.942e-19 Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 R+GTGAPVYLAAVLEY A+VLELAGNAARDNKKNR Sbjct: 54 RIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR 89 HSP 2 Score: 41.9726 bits (97), Expect = 1.942e-19 Identity = 19/20 (95.00%), Postives = 20/20 (100.00%), Query Frame = -2 Query: 277 IIPRHVLLAVRNDEELGKLL 336 IIPRHVLLA+RNDEELGKLL Sbjct: 90 IIPRHVLLAIRNDEELGKLL 109 HSP 3 Score: 27.7202 bits (60), Expect = 1.942e-19 Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRIGRYLK+ Sbjct: 37 FPVGRIGRYLKQ 48
BLAST of GR421085 vs. SwissProt
Match: H2A4_ORYSI (Probable histone H2A.4 OS=Oryza sativa subsp. indica GN=OsI_019561 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 1.942e-19 Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 R+GTGAPVYLAAVLEY A+VLELAGNAARDNKKNR Sbjct: 54 RIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR 89 HSP 2 Score: 41.9726 bits (97), Expect = 1.942e-19 Identity = 19/20 (95.00%), Postives = 20/20 (100.00%), Query Frame = -2 Query: 277 IIPRHVLLAVRNDEELGKLL 336 IIPRHVLLA+RNDEELGKLL Sbjct: 90 IIPRHVLLAIRNDEELGKLL 109 HSP 3 Score: 27.7202 bits (60), Expect = 1.942e-19 Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRIGRYLK+ Sbjct: 37 FPVGRIGRYLKQ 48
BLAST of GR421085 vs. SwissProt
Match: H2A4_ARATH (Probable histone H2A.4 OS=Arabidopsis thaliana GN=At5g02560 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 1.954e-19 Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVGTGAPVYLAAVLEY A+VLELAGNAARDNKKNR Sbjct: 52 RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR 87 HSP 2 Score: 40.0466 bits (92), Expect = 1.954e-19 Identity = 19/20 (95.00%), Postives = 19/20 (95.00%), Query Frame = -2 Query: 277 IIPRHVLLAVRNDEELGKLL 336 IIPRHVLLAVRNDEELG LL Sbjct: 88 IIPRHVLLAVRNDEELGTLL 107 HSP 3 Score: 29.261 bits (64), Expect = 1.954e-19 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRIGRYLKK Sbjct: 35 FPVGRIGRYLKK 46
BLAST of GR421085 vs. TrEMBL
Match: B9T4D5_RICCO (Histone H2A OS=Ricinus communis GN=RCOM_0390300 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 3.480e-19 Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVGTGAPVY+AAVLEY A+VLELAGNAARDNKKNR Sbjct: 51 RVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNR 86 HSP 2 Score: 43.8986 bits (102), Expect = 3.480e-19 Identity = 31/66 (46.97%), Postives = 39/66 (59.09%), Query Frame = -2 Query: 160 IIPRHVLLAVRNDEELGKLLV-------MLLPINTNPIRGVLLLFWWQNED*GEEPMKAENEVSNS 336 IIPRHVLLAVRNDEELGKLL +LP N NP+ L + E +EP K+ ++ + S Sbjct: 87 IIPRHVLLAVRNDEELGKLLAGVTIAHGGVLP-NINPV-----LLPKKTEKATKEPTKSPSKATKS 146 HSP 3 Score: 29.261 bits (64), Expect = 3.480e-19 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRIGRYLKK Sbjct: 34 FPVGRIGRYLKK 45
BLAST of GR421085 vs. TrEMBL
Match: B9T4D3_RICCO (Histone H2A OS=Ricinus communis GN=RCOM_0390180 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 3.480e-19 Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVGTGAPVY+AAVLEY A+VLELAGNAARDNKKNR Sbjct: 51 RVGTGAPVYMAAVLEYLAAEVLELAGNAARDNKKNR 86 HSP 2 Score: 43.8986 bits (102), Expect = 3.480e-19 Identity = 31/66 (46.97%), Postives = 39/66 (59.09%), Query Frame = -2 Query: 160 IIPRHVLLAVRNDEELGKLLV-------MLLPINTNPIRGVLLLFWWQNED*GEEPMKAENEVSNS 336 IIPRHVLLAVRNDEELGKLL +LP N NP+ L + E +EP K+ ++ + S Sbjct: 87 IIPRHVLLAVRNDEELGKLLAGVTIAHGGVLP-NINPV-----LLPKKTEKATKEPTKSPSKATKS 146 HSP 3 Score: 29.261 bits (64), Expect = 3.480e-19 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRIGRYLKK Sbjct: 34 FPVGRIGRYLKK 45
BLAST of GR421085 vs. TrEMBL
Match: C6SZZ2_SOYBN (Histone H2A OS=Glycine max PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.855e-19 Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVGTGAPVYLAAVLEY A+VLELAGNAARDNKKNR Sbjct: 51 RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR 86 HSP 2 Score: 42.3578 bits (98), Expect = 5.855e-19 Identity = 20/20 (100.00%), Postives = 20/20 (100.00%), Query Frame = -2 Query: 277 IIPRHVLLAVRNDEELGKLL 336 IIPRHVLLAVRNDEELGKLL Sbjct: 87 IIPRHVLLAVRNDEELGKLL 106 HSP 3 Score: 29.261 bits (64), Expect = 5.855e-19 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRIGRYLKK Sbjct: 34 FPVGRIGRYLKK 45
BLAST of GR421085 vs. TrEMBL
Match: C6SWA6_SOYBN (Histone H2A OS=Glycine max PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.855e-19 Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVGTGAPVYLAAVLEY A+VLELAGNAARDNKKNR Sbjct: 51 RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR 86 HSP 2 Score: 42.3578 bits (98), Expect = 5.855e-19 Identity = 20/20 (100.00%), Postives = 20/20 (100.00%), Query Frame = -2 Query: 277 IIPRHVLLAVRNDEELGKLL 336 IIPRHVLLAVRNDEELGKLL Sbjct: 87 IIPRHVLLAVRNDEELGKLL 106 HSP 3 Score: 29.261 bits (64), Expect = 5.855e-19 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRIGRYLKK Sbjct: 34 FPVGRIGRYLKK 45
BLAST of GR421085 vs. TrEMBL
Match: A5BE97_VITVI (Histone H2A OS=Vitis vinifera GN=VITISV_009336 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.855e-19 Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVGTGAPVYLAAVLEY A+VLELAGNAARDNKKNR Sbjct: 51 RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR 86 HSP 2 Score: 42.3578 bits (98), Expect = 5.855e-19 Identity = 20/20 (100.00%), Postives = 20/20 (100.00%), Query Frame = -2 Query: 277 IIPRHVLLAVRNDEELGKLL 336 IIPRHVLLAVRNDEELGKLL Sbjct: 87 IIPRHVLLAVRNDEELGKLL 106 HSP 3 Score: 29.261 bits (64), Expect = 5.855e-19 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRIGRYLKK Sbjct: 34 FPVGRIGRYLKK 45
BLAST of GR421085 vs. TrEMBL
Match: A5AFR3_VITVI (Histone H2A OS=Vitis vinifera GN=VITISV_014244 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.855e-19 Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVGTGAPVYLAAVLEY A+VLELAGNAARDNKKNR Sbjct: 51 RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR 86 HSP 2 Score: 42.3578 bits (98), Expect = 5.855e-19 Identity = 20/20 (100.00%), Postives = 20/20 (100.00%), Query Frame = -2 Query: 277 IIPRHVLLAVRNDEELGKLL 336 IIPRHVLLAVRNDEELGKLL Sbjct: 87 IIPRHVLLAVRNDEELGKLL 106 HSP 3 Score: 29.261 bits (64), Expect = 5.855e-19 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRIGRYLKK Sbjct: 34 FPVGRIGRYLKK 45
BLAST of GR421085 vs. TrEMBL
Match: C6TMV8_SOYBN (Histone H2A OS=Glycine max PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.864e-19 Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVGTGAPVYLAAVLEY A+VLELAGNAARDNKKNR Sbjct: 51 RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR 86 HSP 2 Score: 42.3578 bits (98), Expect = 5.864e-19 Identity = 20/20 (100.00%), Postives = 20/20 (100.00%), Query Frame = -2 Query: 277 IIPRHVLLAVRNDEELGKLL 336 IIPRHVLLAVRNDEELGKLL Sbjct: 87 IIPRHVLLAVRNDEELGKLL 106 HSP 3 Score: 29.261 bits (64), Expect = 5.864e-19 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRIGRYLKK Sbjct: 34 FPVGRIGRYLKK 45
BLAST of GR421085 vs. TrEMBL
Match: C5YYL4_SORBI (Histone H2A OS=Sorghum bicolor GN=Sb09g001520 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.519e-19 Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVGTGAPVYLAAVLEY A+VLELAGNAARDNKKNR Sbjct: 54 RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR 89 HSP 2 Score: 41.9726 bits (97), Expect = 7.519e-19 Identity = 19/20 (95.00%), Postives = 20/20 (100.00%), Query Frame = -2 Query: 277 IIPRHVLLAVRNDEELGKLL 336 IIPRHVLLA+RNDEELGKLL Sbjct: 90 IIPRHVLLAIRNDEELGKLL 109 HSP 3 Score: 29.261 bits (64), Expect = 7.519e-19 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRIGRYLKK Sbjct: 37 FPVGRIGRYLKK 48
BLAST of GR421085 vs. TrEMBL
Match: B7EN17_ORYSJ (Histone H2A OS=Oryza sativa subsp. japonica PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.526e-19 Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVGTGAPVYLAAVLEY A+VLELAGNAARDNKKNR Sbjct: 53 RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR 88 HSP 2 Score: 41.9726 bits (97), Expect = 7.526e-19 Identity = 19/20 (95.00%), Postives = 20/20 (100.00%), Query Frame = -2 Query: 277 IIPRHVLLAVRNDEELGKLL 336 IIPRHVLLA+RNDEELGKLL Sbjct: 89 IIPRHVLLAIRNDEELGKLL 108 HSP 3 Score: 29.261 bits (64), Expect = 7.526e-19 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRIGRYLKK Sbjct: 36 FPVGRIGRYLKK 47
BLAST of GR421085 vs. TrEMBL
Match: B7F7N8_ORYSJ (Histone H2A OS=Oryza sativa subsp. japonica PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 9.726e-19 Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 R+GTGAPVYLAAVLEY A+VLELAGNAARDNKKNR Sbjct: 56 RIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR 91 HSP 2 Score: 41.9726 bits (97), Expect = 9.726e-19 Identity = 19/20 (95.00%), Postives = 20/20 (100.00%), Query Frame = -2 Query: 277 IIPRHVLLAVRNDEELGKLL 336 IIPRHVLLA+RNDEELGKLL Sbjct: 92 IIPRHVLLAIRNDEELGKLL 111 HSP 3 Score: 29.261 bits (64), Expect = 9.726e-19 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRIGRYLKK Sbjct: 39 FPVGRIGRYLKK 50
BLAST of GR421085 vs. TAIR peptide
Match: AT5G02560.1 (| Symbols: HTA12 | histone H2A 12 | chr5:575437-576456 FORWARD LENGTH=153) HSP 1 Score: 66.6254 bits (161), Expect = 2.050e-20 Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVGTGAPVYLAAVLEY A+VLELAGNAARDNKKNR Sbjct: 52 RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR 87 HSP 2 Score: 40.0466 bits (92), Expect = 2.050e-20 Identity = 19/20 (95.00%), Postives = 19/20 (95.00%), Query Frame = -2 Query: 277 IIPRHVLLAVRNDEELGKLL 336 IIPRHVLLAVRNDEELG LL Sbjct: 88 IIPRHVLLAVRNDEELGTLL 107 HSP 3 Score: 29.261 bits (64), Expect = 2.050e-20 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRIGRYLKK Sbjct: 35 FPVGRIGRYLKK 46
BLAST of GR421085 vs. TAIR peptide
Match: AT5G27670.1 (| Symbols: HTA7 | histone H2A 7 | chr5:9792807-9793365 REVERSE LENGTH=150) HSP 1 Score: 63.1586 bits (152), Expect = 2.873e-17 Identity = 31/36 (86.11%), Postives = 33/36 (91.67%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 R G+GAPVYLAAVLEY A+VLELAGNAARDNKKNR Sbjct: 53 RYGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNR 88 HSP 2 Score: 35.039 bits (79), Expect = 2.873e-17 Identity = 15/20 (75.00%), Postives = 18/20 (90.00%), Query Frame = -2 Query: 277 IIPRHVLLAVRNDEELGKLL 336 I PRH+ LA+RNDEELG+LL Sbjct: 89 INPRHLCLAIRNDEELGRLL 108 HSP 3 Score: 26.9498 bits (58), Expect = 2.873e-17 Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRI RYLKK Sbjct: 36 FPVGRIARYLKK 47
BLAST of GR421085 vs. TAIR peptide
Match: AT5G02560.2 (| Symbols: HTA12 | histone H2A 12 | chr5:575437-576456 FORWARD LENGTH=177) HSP 1 Score: 53.1434 bits (126), Expect = 1.726e-16 Identity = 33/60 (55.00%), Postives = 34/60 (56.67%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQ------------------------VLELAGNAARDNKKNR 454 RVGTGAPVYLAAVLEY A+ VLELAGNAARDNKKNR Sbjct: 52 RVGTGAPVYLAAVLEYLAAENSCGFCSVASLTIYRCRMSSSDFRVLELAGNAARDNKKNR 111 HSP 2 Score: 40.0466 bits (92), Expect = 1.726e-16 Identity = 19/20 (95.00%), Postives = 19/20 (95.00%), Query Frame = -2 Query: 277 IIPRHVLLAVRNDEELGKLL 336 IIPRHVLLAVRNDEELG LL Sbjct: 112 IIPRHVLLAVRNDEELGTLL 131 HSP 3 Score: 29.261 bits (64), Expect = 1.726e-16 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = -3 Query: 477 FPVGRIGRYLKK 512 FPVGRIGRYLKK Sbjct: 35 FPVGRIGRYLKK 46
BLAST of GR421085 vs. TAIR peptide
Match: AT1G51060.1 (| Symbols: HTA10 | histone H2A 10 | chr1:18926948-18927443 FORWARD LENGTH=132) HSP 1 Score: 62.3882 bits (150), Expect = 2.861e-12 Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVG GAPVYLAAVLEY A+VLELAGNAARDNKK R Sbjct: 44 RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTR 79 HSP 2 Score: 26.1794 bits (56), Expect = 2.861e-12 Identity = 12/20 (60.00%), Postives = 13/20 (65.00%), Query Frame = -3 Query: 477 RREKMR*SFPVGRIGRYLKK 536 R K FPVGRI R+LKK Sbjct: 19 RSSKAGLQFPVGRIARFLKK 38
BLAST of GR421085 vs. TAIR peptide
Match: AT3G20670.1 (| Symbols: HTA13 | histone H2A 13 | chr3:7229472-7229963 FORWARD LENGTH=132) HSP 1 Score: 62.3882 bits (150), Expect = 1.055e-11 Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVG GAPVYLAAVLEY A+VLELAGNAARDNKK R Sbjct: 44 RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTR 79 HSP 2 Score: 24.2534 bits (51), Expect = 1.055e-11 Identity = 11/19 (57.89%), Postives = 12/19 (63.16%), Query Frame = -3 Query: 480 RREKMR*SFPVGRIGRYLK 536 R K FPVGRI R+LK Sbjct: 19 RSSKAGLQFPVGRIARFLK 37
BLAST of GR421085 vs. TAIR peptide
Match: AT4G27230.2 (| Symbols: HTA2 | histone H2A 2 | chr4:13637515-13638325 REVERSE LENGTH=131) HSP 1 Score: 62.3882 bits (150), Expect = 1.055e-11 Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVG GAPVYLAAVLEY A+VLELAGNAARDNKK R Sbjct: 44 RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTR 79 HSP 2 Score: 24.2534 bits (51), Expect = 1.055e-11 Identity = 11/19 (57.89%), Postives = 12/19 (63.16%), Query Frame = -3 Query: 480 RREKMR*SFPVGRIGRYLK 536 R K FPVGRI R+LK Sbjct: 19 RSSKAGLQFPVGRIARFLK 37
BLAST of GR421085 vs. TAIR peptide
Match: AT4G27230.1 (| Symbols: HTA2 | histone H2A 2 | chr4:13637515-13638325 REVERSE LENGTH=131) HSP 1 Score: 62.3882 bits (150), Expect = 1.055e-11 Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVG GAPVYLAAVLEY A+VLELAGNAARDNKK R Sbjct: 44 RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTR 79 HSP 2 Score: 24.2534 bits (51), Expect = 1.055e-11 Identity = 11/19 (57.89%), Postives = 12/19 (63.16%), Query Frame = -3 Query: 480 RREKMR*SFPVGRIGRYLK 536 R K FPVGRI R+LK Sbjct: 19 RSSKAGLQFPVGRIARFLK 37
BLAST of GR421085 vs. TAIR peptide
Match: AT5G54640.1 (| Symbols: HTA1, RAT5, ATHTA1 | Histone superfamily protein | chr5:22196540-22197279 FORWARD LENGTH=130) HSP 1 Score: 62.3882 bits (150), Expect = 1.056e-11 Identity = 31/36 (86.11%), Postives = 32/36 (88.89%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVG GAPVYLAAVLEY A+VLELAGNAARDNKK R Sbjct: 44 RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTR 79 HSP 2 Score: 24.2534 bits (51), Expect = 1.056e-11 Identity = 11/19 (57.89%), Postives = 12/19 (63.16%), Query Frame = -3 Query: 480 RREKMR*SFPVGRIGRYLK 536 R K FPVGRI R+LK Sbjct: 19 RSSKAGLQFPVGRIARFLK 37
BLAST of GR421085 vs. TAIR peptide
Match: AT1G54690.1 (| Symbols: HTA3, H2AXB, G-H2AX, GAMMA-H2AX | gamma histone variant H2AX | chr1:20414607-20415206 REVERSE LENGTH=142) HSP 1 Score: 61.2326 bits (147), Expect = 2.293e-11 Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVG GAPVYL+AVLEY A+VLELAGNAARDNKK R Sbjct: 50 RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTR 85 HSP 2 Score: 24.2534 bits (51), Expect = 2.293e-11 Identity = 11/19 (57.89%), Postives = 12/19 (63.16%), Query Frame = -3 Query: 480 RREKMR*SFPVGRIGRYLK 536 R K FPVGRI R+LK Sbjct: 25 RSSKAGLQFPVGRIARFLK 43
BLAST of GR421085 vs. TAIR peptide
Match: AT1G08880.1 (| Symbols: HTA5, H2AXA, G-H2AX, GAMMA-H2AX | Histone superfamily protein | chr1:2847144-2847676 REVERSE LENGTH=142) HSP 1 Score: 61.2326 bits (147), Expect = 2.293e-11 Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = -1 Query: 347 RVGTGAPVYLAAVLEYRYAQVLELAGNAARDNKKNR 454 RVG GAPVYL+AVLEY A+VLELAGNAARDNKK R Sbjct: 50 RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTR 85 HSP 2 Score: 24.2534 bits (51), Expect = 2.293e-11 Identity = 11/19 (57.89%), Postives = 12/19 (63.16%), Query Frame = -3 Query: 480 RREKMR*SFPVGRIGRYLK 536 R K FPVGRI R+LK Sbjct: 25 RSSKAGLQFPVGRIARFLK 43 The following BLAST results are available for this feature:
BLAST of GR421085 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 10
BLAST of GR421085 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR421085 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 10
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR421085 ID=GR421085; Name=GR421085; organism=Cicer arietinum; type=EST; length=571bpback to top |