GR405707

EST Overview
NameGR405707
Unique NameGR405707
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length445
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of GR405707 vs. SwissProt
Match: AB1D_ARATH (ABC transporter D family member 1 OS=Arabidopsis thaliana GN=ABCC1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.304e-11
Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 3
Query:  219 MPSLQLLKLTRHGQSFLASRRKAILLASGILITGGTAAYMQSRCRVNKPGLFGHCNEKNNDKKVTEE 419
            MPSLQLL+LT  G+  +ASRRK+ILLA+GI+  GGTA Y++SR    +P     CN +++D +  E+
Sbjct:    1 MPSLQLLQLTERGRGLVASRRKSILLAAGIVAAGGTAVYLKSRVASRRPDSSRLCNGQSDDDETLEK 67          
BLAST of GR405707 vs. TrEMBL
Match: A5ASB3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025957 PE=4 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 9.492e-15
Identity = 40/71 (56.34%), Postives = 53/71 (74.65%), Query Frame = 3
Query:  219 MPSLQLLKLTRHGQSFLASRRKAILLASGILITGGTAAYMQSRCRVNKPGLFGHCNEKNNDKKVTEEEVMN 431
            M SLQLL+LT HG+S LASRRK +L+A+G+L+ GGTAAYMQSR    +P  FGH N  +N+ +  ++EV N
Sbjct:    1 MSSLQLLQLTEHGRSLLASRRKTLLVAAGVLVAGGTAAYMQSRFSCRRPNSFGHYNGISNEGETPDKEVGN 71          
BLAST of GR405707 vs. TrEMBL
Match: B9H532_POPTR (Peroxisomal membrane ABC transporter family, PMP family OS=Populus trichocarpa GN=POPTRDRAFT_831368 PE=4 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.049e-13
Identity = 40/72 (55.56%), Postives = 52/72 (72.22%), Query Frame = 3
Query:  219 MPSLQLLKLTRHGQSFLASRRKAILLASGILITGGTAAYMQSRCRVNKPGLFGHCNEKNNDKKVTEEEVMNG 434
            MPSLQLL+LT HG+  LASRRK++L A+GIL  GGTA Y+QSR R  K   F + N   +DKK++++ V NG
Sbjct:    1 MPSLQLLQLTEHGRGILASRRKSLLFAAGILAAGGTAVYVQSRIRSKKSDSFLYYNGIKDDKKISDKLVTNG 72          
BLAST of GR405707 vs. TrEMBL
Match: D7M963_ARALY (Peroxisomal abc transporter OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_490770 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.676e-11
Identity = 36/75 (48.00%), Postives = 50/75 (66.67%), Query Frame = 3
Query:  219 MPSLQLLKLTRHGQSFLASRRKAILLASGILITGGTAAYMQSRCRVNKPGLFGHCNEKNNDKKVTEEEVMNGSTA 443
            MPSLQLL+LT  G+  +ASRRK+ILLA+GI+  GGTA Y++SR    +P    HCN +++D +  E+   N   A
Sbjct:    1 MPSLQLLQLTERGRGLVASRRKSILLAAGIVAAGGTAVYLKSRVSSPRPDSSRHCNGQSDDDEALEKLTGNDKNA 75          
BLAST of GR405707 vs. TAIR peptide
Match: AT4G39850.2 (| Symbols: PXA1 | peroxisomal ABC transporter 1 | chr4:18489220-18496762 FORWARD LENGTH=1338)

HSP 1 Score: 67.781 bits (164), Expect = 2.764e-12
Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 3
Query:  219 MPSLQLLKLTRHGQSFLASRRKAILLASGILITGGTAAYMQSRCRVNKPGLFGHCNEKNNDKKVTEE 419
            MPSLQLL+LT  G+  +ASRRK+ILLA+GI+  GGTA Y++SR    +P     CN +++D +  E+
Sbjct:    1 MPSLQLLQLTERGRGLVASRRKSILLAAGIVAAGGTAVYLKSRVASRRPDSSRLCNGQSDDDETLEK 67          
BLAST of GR405707 vs. TAIR peptide
Match: AT4G39850.3 (| Symbols: PXA1 | peroxisomal ABC transporter 1 | chr4:18489220-18496762 FORWARD LENGTH=1352)

HSP 1 Score: 67.781 bits (164), Expect = 2.764e-12
Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 3
Query:  219 MPSLQLLKLTRHGQSFLASRRKAILLASGILITGGTAAYMQSRCRVNKPGLFGHCNEKNNDKKVTEE 419
            MPSLQLL+LT  G+  +ASRRK+ILLA+GI+  GGTA Y++SR    +P     CN +++D +  E+
Sbjct:    1 MPSLQLLQLTERGRGLVASRRKSILLAAGIVAAGGTAVYLKSRVASRRPDSSRLCNGQSDDDETLEK 67          
BLAST of GR405707 vs. TAIR peptide
Match: AT4G39850.1 (| Symbols: PXA1, PED3, CTS, ACN2, AtABCD1 | peroxisomal ABC transporter 1 | chr4:18489220-18496762 FORWARD LENGTH=1337)

HSP 1 Score: 67.781 bits (164), Expect = 2.764e-12
Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 3
Query:  219 MPSLQLLKLTRHGQSFLASRRKAILLASGILITGGTAAYMQSRCRVNKPGLFGHCNEKNNDKKVTEE 419
            MPSLQLL+LT  G+  +ASRRK+ILLA+GI+  GGTA Y++SR    +P     CN +++D +  E+
Sbjct:    1 MPSLQLLQLTERGRGLVASRRKSILLAAGIVAAGGTAVYLKSRVASRRPDSSRLCNGQSDDDETLEK 67          
The following BLAST results are available for this feature:
BLAST of GR405707 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
AB1D_ARATH2.304e-1149.25ABC transporter D family member 1 OS=Arabidopsis t... [more]
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BLAST of GR405707 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
A5ASB3_VITVI9.492e-1556.34Putative uncharacterized protein OS=Vitis vinifera... [more]
B9H532_POPTR1.049e-1355.56Peroxisomal membrane ABC transporter family, PMP f... [more]
D7M963_ARALY1.676e-1148.00Peroxisomal abc transporter OS=Arabidopsis lyrata ... [more]
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BLAST of GR405707 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT4G39850.22.764e-1249.25| Symbols: PXA1 | peroxisomal ABC transporter 1 | ... [more]
AT4G39850.32.764e-1249.25| Symbols: PXA1 | peroxisomal ABC transporter 1 | ... [more]
AT4G39850.12.764e-1249.25| Symbols: PXA1, PED3, CTS, ACN2, AtABCD1 | peroxi... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 19..32
score
NoneNo IPR availableSEGsegsegcoord: 14..32
score
NoneNo IPR availableSEGsegsegcoord: 8..21
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR405707 ID=GR405707; Name=GR405707; organism=Cicer arietinum; type=EST; length=445bp
GGTCGATAATTGCTCCCTCTCATCAGCGCCTCGCCGCCGCATCGTCATCC
CCACATCCCTCGCCGCGGCATCGTCGTCCCCGCGTTCCTCGCCGCCGTAT
CAACTTCTGCACGTCCCTCGCAGCTGTGTCCAAACCGCTGATTTTACGCG
CTCCTGACTGTAAGAAGAGCAACTACAACTGTTCTATTCTTTGATAAGGG
AGAGATTGAACTTCTGCTATGCCTTCCCTTCAGCTGTTGAAACTAACTCG
GCATGGCCAGAGTTTTCTGGCTTCGAGGAGGAAAGCTATACTACTTGCAT
CTGGTATCTTAATTACTGGTGGAACAGCTGCATACATGCAATCAAGGTGT
AGAGTTAATAAACCTGGTTTATTTGGCCATTGCAATGAAAAAAACAATGA
TAAAAAAGTAACAGAGGAGGAGGTTATGAATGGCTCTACTGCACC
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