GR406478

EST Overview
NameGR406478
Unique NameGR406478
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length330
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR406478 vs. TrEMBL
Match: B9N7C3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_673156 PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.695e-22
Identity = 55/104 (52.88%), Postives = 62/104 (59.62%), Query Frame = 1
Query:   19 PPLRHEGRFPDPNAHRERIDYMEDTYRGRSKFDRPPPLDWDNRDRGRDGFSNERKGFERRXXXXXXXXXXXXXXHRSGGDGGGRWTRDVRERSRSPIRGGPQEK 330
            PP R  GRF D +  RER DY +D YR R+KFDRP P+DW ++DRGRDG  NERKGFERR                      GRW RD R+RSRSPIRG P  K
Sbjct:  211 PPPRQGGRFSDHDMRRERSDYPDDEYRVRNKFDRPMPMDWGHKDRGRDGLFNERKGFERRPPSPPLPPPSLPQR--------GRWGRDGRDRSRSPIRGAPPPK 306          
BLAST of GR406478 vs. TrEMBL
Match: B9ILP3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_825853 PE=4 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.371e-18
Identity = 47/97 (48.45%), Postives = 56/97 (57.73%), Query Frame = 1
Query:   19 PPLRHEGRFPDPNAHRERIDYMEDTYRGRSKFDRPPPLDWDNRDRGRDGFSNERKGFERRXXXXXXXXXXXXXXHRSGGDGGGRWTRDVRERSRSPI 309
            PP R  GRF D +  R+R DY +D YRGR+KFDRP P+DW + D GRD F +ERKGFER+                      GRW R  R+RSRSPI
Sbjct:  214 PPPRQGGRFSDQDMRRDRSDYADDEYRGRNKFDRPMPMDWGHNDHGRDSFFHERKGFERQPPSPPLPPPSLPQ--------SGRWGRKGRDRSRSPI 302          
BLAST of GR406478 vs. TrEMBL
Match: B9RKN3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1052200 PE=4 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.256e-15
Identity = 37/60 (61.67%), Postives = 45/60 (75.00%), Query Frame = 1
Query:   19 PPLRHEGRFPDPNAHRERIDYMEDTYRGRSKFDRPPPLDWDNRDRGRDGFSNERKGFERR 198
            PP RH GRF D +  R R D+ ED YRGR+KFDRP P++W +RDRGRD   ++RKGFERR
Sbjct:  247 PPPRHGGRFSDHDIRRGRPDFPEDEYRGRNKFDRPMPMEWGHRDRGRDNVFHDRKGFERR 306          
The following BLAST results are available for this feature:
BLAST of GR406478 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
B9N7C3_POPTR4.695e-2252.88Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9ILP3_POPTR5.371e-1848.45Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RKN3_RICCO4.256e-1561.67Putative uncharacterized protein OS=Ricinus commun... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 67..80
score
NoneNo IPR availableSEGsegsegcoord: 42..54
score: NAcoord: 57..66
score
NoneNo IPR availableSEGsegsegcoord: 61..82
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR406478 ID=GR406478; Name=GR406478; organism=Cicer arietinum; type=EST; length=330bp
GGATCCACTGCTGCTCTGCCACCACTCAGACACGAAGGTAGGTTTCCAGA
TCCCAATGCGCATAGAGAGCGTATAGATTACATGGAAGACACATACAGGG
GGAGAAGTAAGTTTGATAGGCCACCTCCATTGGATTGGGATAACAGAGAT
CGGGGCAGAGACGGTTTCTCCAATGAAAGAAAAGGATTTGAGAGAAGGCC
ACTTTCACCACCTGCACCTCTTTTGCCATCACTTCCTCCCCATCGCAGTG
GTGGCGACGGTGGTGGTAGGTGGACTCGGGATGTGAGAGAGAGAAGCCGG
TCTCCCATAAGAGGTGGCCCACAAGAAAAA
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