GR409538

EST Overview
NameGR409538
Unique NameGR409538
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length644
Libraries
Library NameType
LIBEST_024779 ICC1882 Slow drought stressed root cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR409538 vs. TrEMBL
Match: Q9M597_MEDSA (Heat shock transcription factor OS=Medicago sativa GN=HSFA4-6 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.574e-13
Identity = 40/69 (57.97%), Postives = 46/69 (66.67%), Query Frame = -1
Query:  153 GLNDVFWETFFDRGSWCIWKPMKVQSERKVFNGRKKEGNLSDPGKFWWNMRKANIFPEQMGRVDQVEKI 359
            G+NDVFWE F         +  +VQSERK  + RK EG  SD G+FWWNMRK+N  PEQMG V QVEKI
Sbjct:  335 GVNDVFWEQFLTEDPGAS-EAQEVQSERKDNSSRKNEGKPSDHGRFWWNMRKSNNHPEQMGHVSQVEKI 402          
BLAST of GR409538 vs. TrEMBL
Match: Q940V6_PHAAT (Heat shock transcription factor OS=Phaseolus acutifolius PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.247e-10
Identity = 38/81 (46.91%), Postives = 46/81 (56.79%), Query Frame = -1
Query:  156 RNHPGGIPP*RQLGLNDVFWETFFDRGSWCIWKPMKVQSERKVFNGRKKEGNLSDPGKFWWNMRKANIFPEQMGRVDQVEK 398
            ++ P GI      G+NDVFWE F         +  +VQSERK  +GRK EG  +D  KFWWN+R AN   E MG V Q EK
Sbjct:  323 KDQPAGITV-AATGVNDVFWEQFLTEDPGAS-ETQEVQSERKDCDGRKNEGKPNDHSKFWWNIRNANNLSEPMGHVGQAEK 401          
BLAST of GR409538 vs. TrEMBL
Match: B9I1G8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_568665 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.189e-10
Identity = 36/76 (47.37%), Postives = 41/76 (53.95%), Query Frame = -1
Query:  156 GIPP*RQLGLNDVFWETFFDRGSWCIWKPMKVQSERKVFNGRKKEGNLSDPGKFWWNMRKANIFPEQMGRVDQVEK 383
            G  P    G+NDVFWE F            +VQSERK  +GRK E    DPGKFWWNMR  N   EQMG +   E+
Sbjct:  331 GTAPTVATGVNDVFWEQFLTENPGST-NAQEVQSERKDSDGRKGEIKPVDPGKFWWNMRNVNNLTEQMGHLTPAER 405          
BLAST of GR409538 vs. TrEMBL
Match: B9H2D8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_758729 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.083e-10
Identity = 35/81 (43.21%), Postives = 42/81 (51.85%), Query Frame = -1
Query:  156 RNHPGGIPP*RQLGLNDVFWETFFDRGSWCIWKPMKVQSERKVFNGRKKEGNLSDPGKFWWNMRKANIFPEQMGRVDQVEK 398
            +  P G  P    G+NDVFWE F            +VQSERK  +GRK E    DP KFWW+MR  N   EQMG +   E+
Sbjct:  327 KEQPAGTAPAVATGVNDVFWEQFLTENPGST-DTQEVQSERKDSDGRKNEIKPGDPRKFWWDMRNVNNLTEQMGHLTPAER 406          
BLAST of GR409538 vs. TrEMBL
Match: B9S8F1_RICCO (Heat shock factor protein, putative OS=Ricinus communis GN=RCOM_1252030 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 1.379e-9
Identity = 37/82 (45.12%), Postives = 41/82 (50.00%), Query Frame = -1
Query:  156 KRNHPGGIPP*RQLGLNDVFWETFFDRGSWCIWKPMKVQSERKVFNGRKKEGNLSDPGKFWWNMRKANIFPEQMGRVDQVEK 401
            K    G  PP    G+NDVFWE F            +VQSERK  N RK E   SD  KFWWNMR  N   EQMG +   E+
Sbjct:  321 KEQAAGTAPPTVATGVNDVFWEQFLTENPGST-DTQEVQSERKDSNDRKNEIKPSDQEKFWWNMRNVNNLAEQMGHLTPAER 401          
BLAST of GR409538 vs. TrEMBL
Match: Q9SXK8_TOBAC (Heat shock factor OS=Nicotiana tabacum GN=NtHSF2 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.991e-8
Identity = 29/68 (42.65%), Postives = 37/68 (54.41%), Query Frame = -1
Query:  156 GLNDVFWETFFDRGSWCIWKPMKVQSERKVFNGRKKEGNLSDPGKFWWNMRKANIFPEQMGRVDQVEK 359
            G+ND+FWE F       +    +VQSERK    +K E    D GKFWWNM+  N   EQ+G +   EK
Sbjct:  341 GVNDIFWEQFLTENPGSV-DASEVQSERKDIGNKKNESKPVDSGKFWWNMKSVNSLAEQLGHLTPAEK 407          
BLAST of GR409538 vs. TrEMBL
Match: D7TJQ8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021269001 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 4.435e-8
Identity = 31/68 (45.59%), Postives = 38/68 (55.88%), Query Frame = -1
Query:  156 GLNDVFWETFFDRGSWCIWKPMKVQSERKVFNGRKKEGNLSDPGKFWWNMRKANIFPEQMGRVDQVEK 359
            G+NDVFWE FF           +VQ ERK    RK EG   D G+FWWN R AN   +QMG++   E+
Sbjct:  288 GVNDVFWEQFFTENPDS--SAEEVQLERKDDESRKNEGKHGDHGRFWWNARSANKLADQMGQLTPAER 353          
The following BLAST results are available for this feature:
BLAST of GR409538 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 7
Match NameE-valueIdentityDescription
Q9M597_MEDSA1.574e-1357.97Heat shock transcription factor OS=Medicago sativa... [more]
Q940V6_PHAAT1.247e-1046.91Heat shock transcription factor OS=Phaseolus acuti... [more]
B9I1G8_POPTR6.189e-1047.37Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9H2D8_POPTR8.083e-1043.21Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9S8F1_RICCO1.379e-945.12Heat shock factor protein, putative OS=Ricinus com... [more]
Q9SXK8_TOBAC1.991e-842.65Heat shock factor OS=Nicotiana tabacum GN=NtHSF2 P... [more]
D7TJQ8_VITVI4.435e-845.59Whole genome shotgun sequence of line PN40024, sca... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 31..45
score: NAcoord: 74..87
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR409538 ID=GR409538; Name=GR409538; organism=Cicer arietinum; type=EST; length=644bp
NACCACCCTAACATGATGGAATATGTATTTATTGCAAAAAAAACAATACA
TACCATTCTTTAAAAATAAAATAAAAAAGAAACAATACTTACCAAAATTA
TTACCTGTGATTGTGGGACATCACAACCCGAAAATATAATTAATGGCTAC
TAAATTTTCTCTACTTGATCAACACGCCCCATCTGTTCAGGAAAAATATT
TGCTTTCCGCATGTTCCACCAAAATTTGCCGGGATCACTAAGATTTCCTT
CCTTTTTTCTGCCATTAAAAACCTTTCTTTCTGATTGCACTTTCATGGGC
TTCCAAATGCACCAAGAACCTCTGTCAAAAAATGTTTCCCAAAAAACATC
ATTTAACCCCAGTTGTCTTCAGGGGGGGATTCCCCCCGGGTGGTTCCTTT
TTTTGGCAACAAACACCCAGGAACCCACCACTTTGGTCCCAAAATTTATG
GTCCAATTCCCCAAAAGAAATAATGGTGGAAACTTTCAAACATCCTAAGT
TGCCCCCCAAAAAAAATTATAACAAAAATTTTTTCTCCCCCACCCGGGGG
AGAAATTTCTCCTAAAACCAAATTGTTTTGAAACCACAAATTAAAAAAAA
TTTTTTCCCCCGCCTTTTTTTGCGCCAAAAATTCCTCCCCCAAA
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