GR406291
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR406291 vs. SwissProt
Match: SGS3_MAIZE (Protein SUPPRESSOR OF GENE SILENCING 3 homolog OS=Zea mays GN=SGS3 PE=1 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.752e-52 Identity = 94/133 (70.68%), Postives = 114/133 (85.71%), Query Frame = 1 Query: 154 ASQKSHETRKKSKWFRKFFQNLDDLPAEQINDPERQWHCPACQGGPGAIDWYRGLQPLMNHAKTKGSKRVKIHRELAQLLDEELRRRGTAVVPAGEAFGKWKGLKDEEKDHEIVWPPMVIIQNTKLEQDENDK 552 AS+KS ETRK +KWF++FF+ L+ L EQIN+ RQWHCPAC+ GPGAIDWY+GLQPL++HA+TKGS RVK+HRELA LL+EEL RRGT+V+PAGE FGKWKGL+ E D EIVWPPMVI+ NT LE+DE+DK Sbjct: 158 ASEKSFETRKTNKWFKEFFEVLNTLSLEQINEQTRQWHCPACKNGPGAIDWYKGLQPLVSHARTKGSTRVKLHRELAALLEEELSRRGTSVLPAGEQFGKWKGLQ-ESTDREIVWPPMVIVMNTFLEKDEDDK 289
BLAST of GR406291 vs. SwissProt
Match: SGS3_ARATH (Protein SUPPRESSOR OF GENE SILENCING 3 OS=Arabidopsis thaliana GN=SGS3 PE=1 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 2.988e-52 Identity = 87/132 (65.91%), Postives = 116/132 (87.88%), Query Frame = 1 Query: 157 SQKSHETRKKSKWFRKFFQNLDDLPAEQINDPERQWHCPACQGGPGAIDWYRGLQPLMNHAKTKGSKRVKIHRELAQLLDEELRRRGTAVVPAGEAFGKWKGLKDEEKDHEIVWPPMVIIQNTKLEQDENDK 552 SQKSH +RK++KWF+KFF +LD L EQIN+P+RQWHCPACQ GPGAIDWY L PL+ HA+TKG++RVK+HRELA++L+++L+ RG +V+P GE +G+WKGL ++EKD+EIVWPPMVII NT+L++D+NDK Sbjct: 191 SQKSHGSRKQNKWFKKFFGSLDSLSIEQINEPQRQWHCPACQNGPGAIDWYN-LHPLLAHARTKGARRVKLHRELAEVLEKDLQMRGASVIPCGEIYGQWKGLGEDEKDYEIVWPPMVIIMNTRLDKDDNDK 321
BLAST of GR406291 vs. SwissProt
Match: SGS3_ORYSI (Protein SUPPRESSOR OF GENE SILENCING 3 homolog OS=Oryza sativa subsp. indica GN=SGS3 PE=3 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 7.360e-51 Identity = 94/133 (70.68%), Postives = 109/133 (81.95%), Query Frame = 1 Query: 154 ASQKSHETRKKSKWFRKFFQNLDDLPAEQINDPERQWHCPACQGGPGAIDWYRGLQPLMNHAKTKGSKRVKIHRELAQLLDEELRRRGTAVVPAGEAFGKWKGLKDEEKDHEIVWPPMVIIQNTKLEQDENDK 552 AS+KS ETRK K F+ FF+ LD L EQ+N+P RQWHCPAC+ GPGAIDWY+GLQPLM HAKTKGS +VK HRELA LL+EEL RRGT+VVP+GE F KWKGL+ E D EIVWPPMV++ NT LEQDE+DK Sbjct: 169 ASEKSFETRKNHKLFKGFFEVLDALSVEQLNEPTRQWHCPACKNGPGAIDWYKGLQPLMTHAKTKGSIKVKRHRELASLLEEELSRRGTSVVPSGEQFRKWKGLR-EGTDREIVWPPMVVVMNTVLEQDEDDK 300
BLAST of GR406291 vs. SwissProt
Match: SGS3_ORYSJ (Protein SUPPRESSOR OF GENE SILENCING 3 homolog OS=Oryza sativa subsp. japonica GN=SGS3 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.255e-50 Identity = 93/133 (69.92%), Postives = 109/133 (81.95%), Query Frame = 1 Query: 154 ASQKSHETRKKSKWFRKFFQNLDDLPAEQINDPERQWHCPACQGGPGAIDWYRGLQPLMNHAKTKGSKRVKIHRELAQLLDEELRRRGTAVVPAGEAFGKWKGLKDEEKDHEIVWPPMVIIQNTKLEQDENDK 552 AS+KS ETRK K F+ FF+ L+ L EQ+N+P RQWHCPAC+ GPGAIDWY+GLQPLM HAKTKGS +VK HRELA LL+EEL RRGT+VVP+GE F KWKGL+ E D EIVWPPMV++ NT LEQDE+DK Sbjct: 169 ASEKSFETRKNHKLFKGFFEVLEALSVEQLNEPTRQWHCPACKNGPGAIDWYKGLQPLMTHAKTKGSIKVKRHRELASLLEEELSRRGTSVVPSGEQFRKWKGLR-ESTDREIVWPPMVVVMNTVLEQDEDDK 300
BLAST of GR406291 vs. SwissProt
Match: SGS3_SOLLC (Protein SUPPRESSOR OF GENE SILENCING 3 OS=Solanum lycopersicum GN=SGS3 PE=1 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.175e-48 Identity = 88/131 (67.18%), Postives = 109/131 (83.21%), Query Frame = 1 Query: 160 QKSHETRKKSKWFRKFFQNLDDLPAEQINDPERQWHCPACQGGPGAIDWYRGLQPLMNHAKTKGSKRVKIHRELAQLLDEELRRRGTAVVPAGEAFGKWKGLKDEEKDHEIVWPPMVIIQNTKLEQDENDK 552 + S+ETRKK+ WF + F +LD L +IN+PERQWHCPAC+GGPGAI+W+ GLQ LM HAKTKG RVKIHRELA+LL+E+LR+RGT+VVP GE +G+W G+ E KD EIVWPPMVII NT+L++DENDK Sbjct: 197 EMSYETRKKNPWFNQLFHSLDSLTVTEINEPERQWHCPACKGGPGAIEWFTGLQSLMTHAKTKG-LRVKIHRELAELLEEDLRQRGTSVVPPGEVYGRWGGM--EFKDKEIVWPPMVIIMNTRLDKDENDK 324
BLAST of GR406291 vs. TrEMBL
Match: D3GBV0_LOTJA (Reduced leaflet 1 OS=Lotus japonicus GN=REL1 PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 6.026e-69 Identity = 129/184 (70.11%), Postives = 138/184 (75.00%), Query Frame = 1 Query: 1 RAGSMQSNVRNEIAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASQKSHETRKKSKWFRKFFQNLDDLPAEQINDPERQWHCPACQGGPGAIDWYRGLQPLMNHAKTKGSKRVKIHRELAQLLDEELRRRGTAVVPAGEAFGKWKGLKDEEKDHEIVWPPMVIIQNTKLEQDENDK 552 R GSMQSNVRNE P ASQKSHETRKKS+WFR+FF+ LD L EQINDPERQWHC ACQGGPGAIDW+RGLQPLM HAKTKGSKRVKIHRELA LLDEEL+RRGT+V+PAGEAFGKWKGLK+EEKDHEIVWPPMV+IQNTKLEQDENDK Sbjct: 148 RTGSMQSNVRNEFPPEDLERNNDVDDDDEEEEEDLLEDSDDDLLSDGDDSDASQKSHETRKKSRWFREFFEILDGLTIEQINDPERQWHCAACQGGPGAIDWFRGLQPLMAHAKTKGSKRVKIHRELAVLLDEELQRRGTSVIPAGEAFGKWKGLKNEEKDHEIVWPPMVVIQNTKLEQDENDK 331
BLAST of GR406291 vs. TrEMBL
Match: B9RW93_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1176800 PE=4 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 9.956e-64 Identity = 110/133 (82.71%), Postives = 122/133 (91.73%), Query Frame = 1 Query: 154 ASQKSHETRKKSKWFRKFFQNLDDLPAEQINDPERQWHCPACQGGPGAIDWYRGLQPLMNHAKTKGSKRVKIHRELAQLLDEELRRRGTAVVPAGEAFGKWKGLKDEEKDHEIVWPPMVIIQNTKLEQDENDK 552 ASQKSHETRKKS+WF+KFF +LD L AE+IN+P RQWHCPACQGGPGAIDWYRGLQPLM HAKTKGS RV++HRELA+LLDEEL RRGT+V+PAGE FGKWKGLK+EE D EIVWPPMVII NT+LEQDENDK Sbjct: 201 ASQKSHETRKKSRWFKKFFDSLDSLTAEEINEPARQWHCPACQGGPGAIDWYRGLQPLMTHAKTKGSNRVRLHRELAELLDEELHRRGTSVIPAGEVFGKWKGLKEEESDREIVWPPMVIIMNTRLEQDENDK 333
BLAST of GR406291 vs. TrEMBL
Match: B9INZ6_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_779908 PE=4 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.300e-63 Identity = 107/132 (81.06%), Postives = 123/132 (93.18%), Query Frame = 1 Query: 157 SQKSHETRKKSKWFRKFFQNLDDLPAEQINDPERQWHCPACQGGPGAIDWYRGLQPLMNHAKTKGSKRVKIHRELAQLLDEELRRRGTAVVPAGEAFGKWKGLKDEEKDHEIVWPPMVIIQNTKLEQDENDK 552 SQ+SHETRKKS+WF+KFF +LD L E++N+P RQWHCPACQGGPGAIDWYRGLQPL+ HAKTKGSKRVK+HRELA+LLDEEL RRGT+V+PAGE FGKWKGLKD+EKDHEIVWPPMVI+ NT+LEQD+NDK Sbjct: 213 SQQSHETRKKSRWFKKFFDSLDSLSIEEVNEPARQWHCPACQGGPGAIDWYRGLQPLITHAKTKGSKRVKLHRELAELLDEELSRRGTSVIPAGEVFGKWKGLKDDEKDHEIVWPPMVIVMNTRLEQDDNDK 344
BLAST of GR406291 vs. TrEMBL
Match: D7TB27_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_130.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000245001 PE=4 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.346e-60 Identity = 107/132 (81.06%), Postives = 119/132 (90.15%), Query Frame = 1 Query: 157 SQKSHETRKKSKWFRKFFQNLDDLPAEQINDPERQWHCPACQGGPGAIDWYRGLQPLMNHAKTKGSKRVKIHRELAQLLDEELRRRGTAVVPAGEAFGKWKGLKDEEKDHEIVWPPMVIIQNTKLEQDENDK 552 SQKSHETRKKSKWF+ FF+ LD L E+IN+P RQWHCPACQGGPGAIDWYRGLQPL+ HAKTKGSKRVK+HRELA+LLDEEL RRGT+VVPAGEAFGKWKGL + KDHEIVWPPMVII NT+LEQD ++K Sbjct: 62 SQKSHETRKKSKWFKSFFEILDSLTIEEINEPARQWHCPACQGGPGAIDWYRGLQPLITHAKTKGSKRVKLHRELAELLDEELYRRGTSVVPAGEAFGKWKGLYESVKDHEIVWPPMVIIMNTRLEQDADEK 193
BLAST of GR406291 vs. TrEMBL
Match: A5ANH9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043511 PE=4 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.998e-60 Identity = 107/132 (81.06%), Postives = 118/132 (89.39%), Query Frame = 1 Query: 157 SQKSHETRKKSKWFRKFFQNLDDLPAEQINDPERQWHCPACQGGPGAIDWYRGLQPLMNHAKTKGSKRVKIHRELAQLLDEELRRRGTAVVPAGEAFGKWKGLKDEEKDHEIVWPPMVIIQNTKLEQDENDK 552 SQKSHETRKKSKWF+ FF+ LD L E+IN+P RQWHCPACQGGPGAIDWYRGLQPL+ HAKTKGSKRVK+HRELA+LLDEEL RRGT+VVPAGEAFGKWKGL + KDHEIVWPPMVII NT+LEQD + K Sbjct: 523 SQKSHETRKKSKWFKSFFEILDSLTIEEINEPARQWHCPACQGGPGAIDWYRGLQPLITHAKTKGSKRVKLHRELAELLDEELYRRGTSVVPAGEAFGKWKGLYESVKDHEIVWPPMVIIMNTRLEQDADXK 654
BLAST of GR406291 vs. TrEMBL
Match: C5YTI1_SORBI (Putative uncharacterized protein Sb08g006200 OS=Sorghum bicolor GN=Sb08g006200 PE=4 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 7.907e-53 Identity = 96/133 (72.18%), Postives = 113/133 (84.96%), Query Frame = 1 Query: 154 ASQKSHETRKKSKWFRKFFQNLDDLPAEQINDPERQWHCPACQGGPGAIDWYRGLQPLMNHAKTKGSKRVKIHRELAQLLDEELRRRGTAVVPAGEAFGKWKGLKDEEKDHEIVWPPMVIIQNTKLEQDENDK 552 AS+KS ET K +KWF+KFF+ L+ L EQIN+P R+WHCPAC+ GPGAIDWYRGLQPLM HA+TKGSKRV++HRELA LL EEL RRGT+VVPAGE FGKWKGL+ E D EIVWPPMVI+ NT LE+D++DK Sbjct: 154 ASEKSFETLKTNKWFKKFFEKLNTLSVEQINEPAREWHCPACKNGPGAIDWYRGLQPLMTHARTKGSKRVRLHRELAALLGEELSRRGTSVVPAGEQFGKWKGLQ-ESTDREIVWPPMVIVMNTLLEKDDDDK 285
BLAST of GR406291 vs. TrEMBL
Match: C0PDM8_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.544e-51 Identity = 94/133 (70.68%), Postives = 114/133 (85.71%), Query Frame = 1 Query: 154 ASQKSHETRKKSKWFRKFFQNLDDLPAEQINDPERQWHCPACQGGPGAIDWYRGLQPLMNHAKTKGSKRVKIHRELAQLLDEELRRRGTAVVPAGEAFGKWKGLKDEEKDHEIVWPPMVIIQNTKLEQDENDK 552 AS+KS ETRK +KWF++FF+ L+ L EQIN+ RQWHCPAC+ GPGAIDWY+GLQPL++HA+TKGS RVK+HRELA LL+EEL RRGT+V+PAGE FGKWKGL+ E D EIVWPPMVI+ NT LE+DE+DK Sbjct: 158 ASEKSFETRKTNKWFKEFFEVLNTLSLEQINEQTRQWHCPACKNGPGAIDWYKGLQPLVSHARTKGSTRVKLHRELAALLEEELSRRGTSVLPAGEQFGKWKGLQ-ESTDREIVWPPMVIVMNTFLEKDEDDK 289
BLAST of GR406291 vs. TrEMBL
Match: D7M2B2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_489218 PE=4 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 3.322e-51 Identity = 86/132 (65.15%), Postives = 116/132 (87.88%), Query Frame = 1 Query: 157 SQKSHETRKKSKWFRKFFQNLDDLPAEQINDPERQWHCPACQGGPGAIDWYRGLQPLMNHAKTKGSKRVKIHRELAQLLDEELRRRGTAVVPAGEAFGKWKGLKDEEKDHEIVWPPMVIIQNTKLEQDENDK 552 SQ+SH +RK++KWF+KFF +LD L EQIN+P+RQWHCPACQ GPGAIDWY L PL+ HA+TKG++RVK+HRELA++L+++L+ +G +V+P GE +G+WKGL ++EKDHEIVWPPMVII NT+L++D+NDK Sbjct: 185 SQQSHGSRKQNKWFKKFFDSLDSLSIEQINEPQRQWHCPACQNGPGAIDWYN-LHPLLAHARTKGARRVKLHRELAEVLEKDLQMKGASVIPCGEIYGQWKGLGEDEKDHEIVWPPMVIIMNTRLDKDDNDK 315
BLAST of GR406291 vs. TrEMBL
Match: C5YTI3_SORBI (Putative uncharacterized protein Sb08g006220 OS=Sorghum bicolor GN=Sb08g006220 PE=4 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.339e-51 Identity = 93/133 (69.92%), Postives = 112/133 (84.21%), Query Frame = 1 Query: 154 ASQKSHETRKKSKWFRKFFQNLDDLPAEQINDPERQWHCPACQGGPGAIDWYRGLQPLMNHAKTKGSKRVKIHRELAQLLDEELRRRGTAVVPAGEAFGKWKGLKDEEKDHEIVWPPMVIIQNTKLEQDENDK 552 AS+KS ETRK +KWF+ FF+ L+ L EQIN+ RQWHCPAC+ GPGAIDWY+GLQPLM HA+TKGS RV++HRELA LL+EEL RRGT+V+PAGE FGKWKGL+ E D EIVWPPMVI+ NT LE+D++DK Sbjct: 154 ASEKSFETRKTNKWFKGFFEVLNTLSVEQINEQTRQWHCPACKNGPGAIDWYKGLQPLMTHARTKGSTRVRLHRELAALLEEELSRRGTSVIPAGEQFGKWKGLR-ESTDREIVWPPMVIVMNTFLEKDDDDK 285
BLAST of GR406291 vs. TrEMBL
Match: A9PJV9_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 7.925e-45 Identity = 78/133 (58.65%), Postives = 101/133 (75.94%), Query Frame = 1 Query: 154 ASQKSHETRKKSKWFRKFFQNLDDLPAEQINDPERQWHCPACQGGPGAIDWYRGLQPLMNHAKTKGSKRVKIHRELAQLLDEELRRRGTAVVPAGEAFGKWKGLKDEEKDHEIVWPPMVIIQNTKLEQDENDK 552 AS+ S++ KKSKWF FF + D L E+IN R+WHCPAC+GGPGAIDWYRG+ PL HAKTK ++RVK+HR +++LDEE+ ++G V P GEAFG+W+GL KD+EI WPPMV+I NT+ EQ+EN K Sbjct: 175 ASENSYDVLKKSKWFNAFFDDFDKLTVEEINSRARKWHCPACKGGPGAIDWYRGIDPLAYHAKTKKTRRVKLHRMFSEILDEEMHKKGGLVTPVGEAFGRWQGLDARVKDYEITWPPMVLIMNTRYEQEENGK 307
BLAST of GR406291 vs. TAIR peptide
Match: AT5G23570.1 (| Symbols: SGS3, ATSGS3 | XS domain-containing protein / XS zinc finger domain-containing protein-related | chr5:7943621-7945874 FORWARD LENGTH=625) HSP 1 Score: 204.912 bits (520), Expect = 3.055e-53 Identity = 87/132 (65.91%), Postives = 116/132 (87.88%), Query Frame = 1 Query: 157 SQKSHETRKKSKWFRKFFQNLDDLPAEQINDPERQWHCPACQGGPGAIDWYRGLQPLMNHAKTKGSKRVKIHRELAQLLDEELRRRGTAVVPAGEAFGKWKGLKDEEKDHEIVWPPMVIIQNTKLEQDENDK 552 SQKSH +RK++KWF+KFF +LD L EQIN+P+RQWHCPACQ GPGAIDWY L PL+ HA+TKG++RVK+HRELA++L+++L+ RG +V+P GE +G+WKGL ++EKD+EIVWPPMVII NT+L++D+NDK Sbjct: 191 SQKSHGSRKQNKWFKKFFGSLDSLSIEQINEPQRQWHCPACQNGPGAIDWYN-LHPLLAHARTKGARRVKLHRELAEVLEKDLQMRGASVIPCGEIYGQWKGLGEDEKDYEIVWPPMVIIMNTRLDKDDNDK 321 The following BLAST results are available for this feature:
BLAST of GR406291 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 5
BLAST of GR406291 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR406291 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR406291 ID=GR406291; Name=GR406291; organism=Cicer arietinum; type=EST; length=650bpback to top Annotated Terms
The
following terms have been associated with
this EST:
|