HO068036

EST Overview
NameHO068036
Unique NameHO068036
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length541
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO068036 vs. TrEMBL
Match: Q1SKU3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MtrDRAFT_AC140551g9v2 PE=4 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.902e-42
Identity = 90/114 (78.95%), Postives = 96/114 (84.21%), Query Frame = -1
Query:  197 YRPVADCLALGNLQDLEARTRRFNDDRNDSVSLIANQSHMEDNVGENVRPSPGRCSDESTKRGSISFRTLEKSVASTGTFVELSLFSPSHSATXXXXXXXXXXPMRSPTHVIGP 538
            YRPVADCLALGNLQDLEARTRRFNDD+ND+VSLI +QSH+EDNV EN R SPGR SDESTKRGSISFRT+EK VASTGTFVELSLFSPS SAT          PM+SPT VIGP
Sbjct:  289 YRPVADCLALGNLQDLEARTRRFNDDQNDTVSLITSQSHLEDNVEENARLSPGRYSDESTKRGSISFRTMEKGVASTGTFVELSLFSPSRSATPPGSPSLPGWPMQSPTQVIGP 402          
BLAST of HO068036 vs. TrEMBL
Match: B9SS72_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0618380 PE=4 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.655e-25
Identity = 66/113 (58.41%), Postives = 75/113 (66.37%), Query Frame = -1
Query:  200 YRPVADCLALGNLQDLEARTRRFNDDRNDSVSLIANQSHMEDNVGENVRPSPGRCSDESTKRGSISFRTLEKSVASTGTFVELSLFSPSHSATXXXXXXXXXXPMRSPTHVIG 538
            Y P+AD LALGN+ D+EAR RR  DD ND++SLIANQSH+E    E+ R SPGR SD STKRGSISFRT E+   STG FVELSLFSPS  AT           M  P   +G
Sbjct:  294 YCPIADSLALGNILDMEAR-RRIIDDHNDTISLIANQSHLE----ESSRISPGRHSDASTKRGSISFRTYERDGTSTGPFVELSLFSPSRDATPPGSPPLMGWLMHPPRQALG 401          
BLAST of HO068036 vs. TrEMBL
Match: B9N0G4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_742547 PE=4 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.764e-18
Identity = 56/93 (60.22%), Postives = 69/93 (74.19%), Query Frame = -1
Query:  260 YRPVADCLALGNLQDLEARTRRFNDDRNDSVSLIANQSHMEDNVGENVRPSPGRCSDESTKRGSISFRTLEKSVASTGTFVELSLFSPSHSAT 538
            Y PVAD LALG+L+DLEAR  R+  D  +++SL+ANQSH+E++       SPGR SD STKRGSISFRT ++   S+G FVELSLFSPS  AT
Sbjct:  291 YYPVADSLALGDLRDLEAR--RYAAD--ETISLVANQSHLEES-----GMSPGRNSDASTKRGSISFRTYQRDGTSSGPFVELSLFSPSPDAT 374          
BLAST of HO068036 vs. TrEMBL
Match: B9N7A2_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_272274 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.929e-18
Identity = 54/94 (57.45%), Postives = 66/94 (70.21%), Query Frame = -1
Query:  260 YRPVADCLALGNLQDLEARTRRFNDDRNDSVSLIANQSHMEDNVGENVRPSPGRCSDESTKRGSISFRTLEK-SVASTGTFVELSLFSPSHSAT 538
            Y PVAD LALGNL+DLE  +RR+ D+ N+++SL ANQ+H+E    E+   SPGR SD STKRGSISFR  ++      G FVELSLFSP   AT
Sbjct:  294 YYPVADSLALGNLRDLEV-SRRYADEHNETISLDANQNHLE----ESAHLSPGRNSDASTKRGSISFRACQRGDETPPGPFVELSLFSPGRDAT 382          
BLAST of HO068036 vs. TrEMBL
Match: A9PFF2_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.950e-17
Identity = 56/93 (60.22%), Postives = 69/93 (74.19%), Query Frame = -1
Query:  260 YRPVADCLALGNLQDLEARTRRFNDDRNDSVSLIANQSHMEDNVGENVRPSPGRCSDESTKRGSISFRTLEKSVASTGTFVELSLFSPSHSAT 538
            Y PVAD LALG+L+DLEAR  R+  D  +++SL+ANQSH+E++       SPGR SD STKRGSISFRT ++   S+G FVELSLFSPS  AT
Sbjct:  164 YYPVADSLALGDLRDLEAR--RYAAD--ETISLVANQSHLEES-----GMSPGRNSDASTKRGSISFRTYQRD-TSSGPFVELSLFSPSPDAT 246          
BLAST of HO068036 vs. TrEMBL
Match: D7TGR1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_35.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00023219001 PE=4 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 5.323e-7
Identity = 35/64 (54.69%), Postives = 37/64 (57.81%), Query Frame = -1
Query:  197 SPGRCSDESTKRGSISFRTLEKSVASTGTFVELSLFSPSHSATXXXXXXXXXXPMRSPTHVIGP 388
            S  R SD STKRGSISFRT+EK   S  T+VELSLFSPS  AT          PM     V GP
Sbjct:  150 STARNSDASTKRGSISFRTVEKDGTSVDTYVELSLFSPSRHATPPGSPRPLGWPMVPRAQVHGP 213          
The following BLAST results are available for this feature:
BLAST of HO068036 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 6
Match NameE-valueIdentityDescription
Q1SKU3_MEDTR3.902e-4278.95Putative uncharacterized protein OS=Medicago trunc... [more]
B9SS72_RICCO9.655e-2558.41Putative uncharacterized protein OS=Ricinus commun... [more]
B9N0G4_POPTR1.764e-1860.22Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9N7A2_POPTR3.929e-1857.45Predicted protein (Fragment) OS=Populus trichocarp... [more]
A9PFF2_POPTR1.950e-1760.22Putative uncharacterized protein OS=Populus tricho... [more]
D7TGR1_VITVI5.323e-754.69Whole genome shotgun sequence of line PN40024, sca... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 4..13
score
NoneNo IPR availableSEGsegsegcoord: 7..21
score
NoneNo IPR availableSEGsegsegcoord: 35..49
score
NoneNo IPR availableSEGsegsegcoord: 95..105
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO068036 ID=HO068036; Name=HO068036; organism=Cicer arietinum; type=EST; length=541bp
TTATCGAGATAGCGCAGCAAAAAAAAAGACAACAAAGAGCTACTCAATAA
ATTCTAGGGCAAAAACATTATACCTAGAATTAGCAAACAGAACCCAAAAG
AAAAAAGCCTTATTGAAGCTAAACCCTTTACAATCAGTTCTCCTTTTCCA
AAAATTGACATTCACCCAACATATTCAGCTACTAGCTCTGCCACTAAGGT
CCAATAACATGGGTTGGGGATCGCATAGGCCAACCTGGAAGAGGTGGCGA
TCCTGGAGGGGTTGCACTGTGGCTGGGAGAGAAAAGGCTTAGTTCCACAA
ATGTTCCAGTTGAAGCAACACTCTTTTCCAATGTTCGAAATGAAATTGAT
CCACGCTTTGTTGATTCATCAGAACACCTACCAGGACTAGGCCTAACATT
TTCCCCAACATTATCTTCCATATGACTCTGGTTAGCAATAAGGGACACAG
AATCATTACGATCATCATTAAACCTTCTAGTCCTAGCTTCCAAGTCTTGT
AGATTTCCCAGCGCTAGACAATCTGCAACTGGACGGTACCT
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