GR420693

EST Overview


Name	GR420693
Unique Name	GR420693
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	675

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR420693 vs. SwissProt
Match: RS23_FRAAN (40S ribosomal protein S23 OS=Fragaria ananassa GN=RPS23 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.351e-33
Identity = 100/155 (64.52%), Postives = 106/155 (68.39%), Query Frame = 1

Query:   73 MGKTRGMKSGAARKL--HRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIV--KRLEFSKQPNSAIREAKCIKNARVQL----KKIAGTFVPNDGCENLNYIE------IAGMKCFFGRKGHVLDRRRYEVVRFMKVSGVSLLE--RSTLQKPR 489
            MGKTRGM  GAARKL  HRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIV  K    +KQPNSAIR  KC   ARVQL    KKIA  FVPNDGC  LNYIE      IAG    FGRKGH +        + +KVSGVSLL   +   +KPR
Sbjct:    1 MGKTRGM--GAARKLKNHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIR--KC---ARVQLIKNGKKIA-AFVPNDGC--LNYIEENDEVLIAG----FGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPR 141

[Close]

BLAST of GR420693 vs. SwissProt
Match: RS23_EUPES (40S ribosomal protein S23 OS=Euphorbia esula GN=RPS23 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.206e-32
Identity = 98/155 (63.23%), Postives = 104/155 (67.10%), Query Frame = 1

Query:   73 MGKTRGMKSGAARKL--HRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIV--KRLEFSKQPNSAIREAKCIKNARVQL----KKIAGTFVPNDGCENLNYIE------IAGMKCFFGRKGHVLDRRRYEVVRFMKVSGVSLLE--RSTLQKPR 489
            MGKT GM  GAARKL  HRR QRWADKSYKKSHLGNEWKKPFAGSSHAKGIV  K    +KQPNSAIR  KC   ARVQL    KKIA  FVPNDGC  LNYIE      IAG    FGRKGH +        + +KVSGVSLL   +   +KPR
Sbjct:    1 MGKTHGM--GAARKLKSHRRTQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIR--KC---ARVQLIKNGKKIA-AFVPNDGC--LNYIEENDEVLIAG----FGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPR 141

[Close]

BLAST of GR420693 vs. SwissProt
Match: RS232_ARATH (40S ribosomal protein S23-2 OS=Arabidopsis thaliana GN=RPS23B PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 2.640e-30
Identity = 96/155 (61.94%), Postives = 102/155 (65.81%), Query Frame = 1

Query:   73 MGKTRGMKSGAARKLHRRR--QRWADKSYKKSHLGNEWKKPFAGSSHAKGIV--KRLEFSKQPNSAIREAKCIKNARVQL----KKIAGTFVPNDGCENLNYIE------IAGMKCFFGRKGHVLDRRRYEVVRFMKVSGVSLLE--RSTLQKPR 489
            MGKTRGM  GA RKL R R  QRWADK YKKSHLGNEWKKPFAGSSHAKGIV  K    +KQPNSAIR  KC   ARVQL    KKIA  FVPNDGC  LNYIE      IAG    FGRKGH +        + +KVSGVSLL   +   +KPR
Sbjct:    1 MGKTRGM--GAGRKLKRLRINQRWADKQYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIR--KC---ARVQLIKNGKKIA-AFVPNDGC--LNYIEENDEVLIAG----FGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPR 141

[Close]

BLAST of GR420693 vs. SwissProt
Match: RS231_ARATH (40S ribosomal protein S23-1 OS=Arabidopsis thaliana GN=RPS23A PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.732e-27
Identity = 89/153 (58.17%), Postives = 97/153 (63.40%), Query Frame = 1

Query:   73 MGKTRGMKSGAARKLHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIV--KRLEFSKQPNSAIREAKCIKNARVQL----KKIAGTFVPNDGCENLNYIE------IAGMKCFFGRKGHVLDRRRYEVVRFMKVSGVSLLE--RSTLQKPR 489
            MGKTRGM +G   K  R  QRWADK YKKS+ GNEWKKPFA SSHAKGIV  K    +KQPNSAIR  KC   ARVQL    KKIA  FVPNDGC  LNYIE      IAG    FGRKGH +        + +KVSGVSLL   +   +KPR
Sbjct:    1 MGKTRGMGAGRKLKQLRITQRWADKHYKKSNRGNEWKKPFACSSHAKGIVLEKIGIEAKQPNSAIR--KC---ARVQLIKNGKKIA-AFVPNDGC--LNYIEENDEVLIAG----FGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPR 141

[Close]

BLAST of GR420693 vs. SwissProt
Match: RS23_LUMRU (40S ribosomal protein S23 OS=Lumbricus rubellus GN=RPS23 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.225e-24
Identity = 73/150 (48.67%), Postives = 89/150 (59.33%), Query Frame = 1

Query:   73 MGKTRGMKSGAARKLHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIV--KRLEFSKQPNSAIREAKCIKNARVQLKKIAGTFVPNDGCENLNYIE------IAGMKCFFGRKGHVLDRRRYEVVRFMKVSGVSLLERSTLQKPRKE 495
            MGK RG+++    K HRR QRW DK YKKSHLG  WK  PF G+SHAKGIV  K    +KQPNSAIR  KC++   ++  K    FVP DGC  LN+IE      +AG    FGRKGH +        + +KV+ VSLL    L K +KE
Sbjct:    1 MGKPRGLRTARKLKNHRREQRWHDKDYKKSHLGTRWKSNPFGGASHAKGIVLEKVGVEAKQPNSAIR--KCVRVQLIKNGKKITAFVPRDGC--LNFIEENDEVLVAG----FGRKGHAVGDIPGVRFKVVKVASVSLL---ALYKQKKE 139

[Close]

BLAST of GR420693 vs. SwissProt
Match: RS23_DERVA (40S ribosomal protein S23 OS=Dermacentor variabilis GN=RpS23 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.074e-23
Identity = 72/150 (48.00%), Postives = 89/150 (59.33%), Query Frame = 1

Query:   73 MGKTRGMKSGAARKLHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIV--KRLEFSKQPNSAIREAKCIKNARVQLKKIAGTFVPNDGCENLNYIE------IAGMKCFFGRKGHVLDRRRYEVVRFMKVSGVSLLERSTLQKPRKE 495
            MGK RG+++    + HRR QRW DK YKK+HLG  WK  PF G+SHAKGIV  K    +KQPNSAIR  KC++   ++  K    FVP DGC  LNYIE      +AG    FGRKGH +        + +KV+ VSLL    L K +KE
Sbjct:    1 MGKPRGLRTARKHRSHRRDQRWHDKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIR--KCVRVQLIKNGKKITAFVPRDGC--LNYIEENDEVLVAG----FGRKGHAVGDIPGVRFKVVKVANVSLL---ALYKEKKE 139

[Close]

BLAST of GR420693 vs. SwissProt
Match: RS23_SPOFR (40S ribosomal protein S23 OS=Spodoptera frugiperda GN=RpS23 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.126e-23
Identity = 71/150 (47.33%), Postives = 89/150 (59.33%), Query Frame = 1

Query:   73 MGKTRGMKSGAARKLHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIV--KRLEFSKQPNSAIREAKCIKNARVQLKKIAGTFVPNDGCENLNYIE------IAGMKCFFGRKGHVLDRRRYEVVRFMKVSGVSLLERSTLQKPRKE 495
            MGK RG+++      HRR QRWADK YKK+H+G  WK  PF G+SHAKGIV  K    +KQPNSAIR  KC++   ++  K    FVP DGC  LN+IE      +AG    FGRKGH +        + +KV+ VSLL    L K +KE
Sbjct:    1 MGKPRGIRTARKHVNHRREQRWADKDYKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIR--KCVRVQLIKNGKKVTAFVPRDGC--LNHIEENDEVLVAG----FGRKGHAVGDIPGVRFKVVKVANVSLL---ALYKEKKE 139

[Close]

BLAST of GR420693 vs. SwissProt
Match: RS23_PAPDA (40S ribosomal protein S23 OS=Papilio dardanus GN=RpS23 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.126e-23
Identity = 71/150 (47.33%), Postives = 89/150 (59.33%), Query Frame = 1

Query:   73 MGKTRGMKSGAARKLHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIV--KRLEFSKQPNSAIREAKCIKNARVQLKKIAGTFVPNDGCENLNYIE------IAGMKCFFGRKGHVLDRRRYEVVRFMKVSGVSLLERSTLQKPRKE 495
            MGK RG+++      HRR QRWADK YKK+H+G  WK  PF G+SHAKGIV  K    +KQPNSAIR  KC++   ++  K    FVP DGC  LN+IE      +AG    FGRKGH +        + +KV+ VSLL    L K +KE
Sbjct:    1 MGKPRGIRTARKHVNHRREQRWADKDYKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIR--KCVRVQLIKNGKKVTAFVPRDGC--LNHIEENDEVLVAG----FGRKGHAVGDIPGVRFKVVKVANVSLL---ALYKEKKE 139

[Close]

BLAST of GR420693 vs. SwissProt
Match: RS23_DROME (40S ribosomal protein S23 OS=Drosophila melanogaster GN=RpS23 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.963e-23
Identity = 72/150 (48.00%), Postives = 89/150 (59.33%), Query Frame = 1

Query:   73 MGKTRGMKSGAARKLHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIV--KRLEFSKQPNSAIREAKCIKNARVQLKKIAGTFVPNDGCENLNYIE------IAGMKCFFGRKGHVLDRRRYEVVRFMKVSGVSLLERSTLQKPRKE 495
            MGK RG+++      HRR QRWADK YKK+HLG  WK  PF G+SHAKGIV  K    +KQPNSAIR  KC++   ++  K    FVP DG  +LNYIE      +AG    FGRKGH +        + +KV+ VSLL    L K +KE
Sbjct:    1 MGKPRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIR--KCVRVQLIKNGKKITAFVPRDG--SLNYIEENDEVLVAG----FGRKGHAVGDIPGVRFKVVKVANVSLL---ALYKEKKE 139

[Close]

BLAST of GR420693 vs. SwissProt
Match: RS23_RAT (40S ribosomal protein S23 OS=Rattus norvegicus GN=Rps23 PE=2 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 1.313e-21
Identity = 70/150 (46.67%), Postives = 89/150 (59.33%), Query Frame = 1

Query:   73 MGKTRGMKSGAARKLHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIV--KRLEFSKQPNSAIREAKCIKNARVQLKKIAGTFVPNDGCENLNYIE------IAGMKCFFGRKGHVLDRRRYEVVRFMKVSGVSLLERSTLQKPRKE 495
            MGK RG+++    + HRR Q+W DK YKK+HLG   K  PF G+SHAKGIV  K    +KQPNSAIR  KC++   ++  K    FVPNDGC  LN+IE      +AG    FGRKGH +        + +KV+ VSLL    L K +KE
Sbjct:    1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIR--KCVRVQLIKNGKKITAFVPNDGC--LNFIEENDEVLVAG----FGRKGHAVGDIPGVRFKVVKVANVSLL---ALYKGKKE 139

[Close]

BLAST of GR420693 vs. TrEMBL
Match: Q38HT5_SOLTU (Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.759e-32
Identity = 96/153 (62.75%), Postives = 103/153 (67.32%), Query Frame = 1

Query:   73 MGKTRGMKSGAARKLHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIV--KRLEFSKQPNSAIREAKCIKNARVQL----KKIAGTFVPNDGCENLNYIE------IAGMKCFFGRKGHVLDRRRYEVVRFMKVSGVSLLE--RSTLQKPR 489
            MGKTRGM +G   K HRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIV  K    +KQPNSAIR  KC   ARVQL    KKIA  FVPNDGC  LNYIE      IAG    FGRKGH +        + +KVSGVSLL   +   +KPR
Sbjct:    1 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIR--KC---ARVQLIKNGKKIA-AFVPNDGC--LNYIEENDEVLIAG----FGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPR 141

[Close]

BLAST of GR420693 vs. TrEMBL
Match: B9SD33_RICCO (40S ribosomal protein S23, putative OS=Ricinus communis GN=RCOM_0819610 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.428e-31
Identity = 99/155 (63.87%), Postives = 106/155 (68.39%), Query Frame = 1

Query:   73 MGKTRGMKSGAARKL--HRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIV--KRLEFSKQPNSAIREAKCIKNARVQL----KKIAGTFVPNDGCENLNYIE------IAGMKCFFGRKGHVLDRRRYEVVRFMKVSGVSLLE--RSTLQKPR 489
            MGKTRGM  GAARKL  HRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIV  K    +KQPNSAIR  KC   ARVQL    KKIA  FVPNDGC  LNYIE      IAG    FGRKGH +        + +KVSGVSLL   +   +KPR
Sbjct:    1 MGKTRGM--GAARKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIR--KC---ARVQLIKNGKKIA-AFVPNDGC--LNYIEENDEVLIAG----FGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPR 141

[Close]

BLAST of GR420693 vs. TrEMBL
Match: B3TLT8_ELAGV (40S ribosomal protein S23 OS=Elaeis guineensis var. tenera PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.428e-31
Identity = 99/155 (63.87%), Postives = 106/155 (68.39%), Query Frame = 1

Query:   73 MGKTRGMKSGAARKL--HRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIV--KRLEFSKQPNSAIREAKCIKNARVQL----KKIAGTFVPNDGCENLNYIE------IAGMKCFFGRKGHVLDRRRYEVVRFMKVSGVSLLE--RSTLQKPR 489
            MGKTRGM  GAARKL  HRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIV  K    +KQPNSAIR  KC   ARVQL    KKIA  FVPNDGC  LNYIE      IAG    FGRKGH +        + +KVSGVSLL   +   +KPR
Sbjct:    1 MGKTRGM--GAARKLKTHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIR--KC---ARVQLIKNGKKIA-AFVPNDGC--LNYIEENDEVLIAG----FGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPR 141

[Close]

BLAST of GR420693 vs. TrEMBL
Match: C6TDD7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.436e-31
Identity = 99/155 (63.87%), Postives = 105/155 (67.74%), Query Frame = 1

Query:   73 MGKTRGMKSGAARKL--HRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIV--KRLEFSKQPNSAIREAKCIKNARVQL----KKIAGTFVPNDGCENLNYIE------IAGMKCFFGRKGHVLDRRRYEVVRFMKVSGVSLLE--RSTLQKPR 489
            MGKT GM  GAARKL  HRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIV  K    +KQPNSAIR  KC   ARVQL    KKIA  FVPNDGC  LNYIE      IAG    FGRKGH +        + +KVSGVSLL   +   +KPR
Sbjct:    1 MGKTHGM--GAARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIR--KC---ARVQLIKNGKKIA-VFVPNDGC--LNYIEENDEVLIAG----FGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPR 141

[Close]

BLAST of GR420693 vs. TrEMBL
Match: C5WV32_SORBI (Putative uncharacterized protein Sb01g003410 OS=Sorghum bicolor GN=Sb01g003410 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.436e-31
Identity = 94/153 (61.44%), Postives = 102/153 (66.67%), Query Frame = 1

Query:   73 MGKTRGMKSGAARKLHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIV--KRLEFSKQPNSAIREAKCIKNARVQL----KKIAGTFVPNDGCENLNYIE------IAGMKCFFGRKGHVLDRRRYEVVRFMKVSGVSLLE--RSTLQKPR 489
            MGKTRGM +G   K HRR QRWADK+YKKSHLGNEWKKPFAGSSHAKGIV  K    +KQPNSAIR  KC   ARVQL    KKIA  FVPNDGC  LNYIE      IAG    FGRKGH +        + +KVSGVSLL   +   +KPR
Sbjct:    1 MGKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIR--KC---ARVQLVKNGKKIA-AFVPNDGC--LNYIEENDEVLIAG----FGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPR 141

[Close]

BLAST of GR420693 vs. TrEMBL
Match: B4FBY5_MAIZE (40S ribosomal protein S23 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.436e-31
Identity = 94/153 (61.44%), Postives = 102/153 (66.67%), Query Frame = 1

Query:   73 MGKTRGMKSGAARKLHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIV--KRLEFSKQPNSAIREAKCIKNARVQL----KKIAGTFVPNDGCENLNYIE------IAGMKCFFGRKGHVLDRRRYEVVRFMKVSGVSLLE--RSTLQKPR 489
            MGKTRGM +G   K HRR QRWADK+YKKSHLGNEWKKPFAGSSHAKGIV  K    +KQPNSAIR  KC   ARVQL    KKIA  FVPNDGC  LNYIE      IAG    FGRKGH +        + +KVSGVSLL   +   +KPR
Sbjct:    1 MGKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIR--KC---ARVQLVKNGKKIA-AFVPNDGC--LNYIEENDEVLIAG----FGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPR 141

[Close]

BLAST of GR420693 vs. TrEMBL
Match: A9PBK6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_563786 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.436e-31
Identity = 95/153 (62.09%), Postives = 103/153 (67.32%), Query Frame = 1

Query:   73 MGKTRGMKSGAARKLHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIV--KRLEFSKQPNSAIREAKCIKNARVQL----KKIAGTFVPNDGCENLNYIE------IAGMKCFFGRKGHVLDRRRYEVVRFMKVSGVSLLE--RSTLQKPR 489
            MGKTRGM +G   K HRRRQRWADKSYKKS+LGNEWKKPFAGSSHAKGIV  K    +KQPNSAIR  KC   ARVQL    KKIA  FVPNDGC  LNYIE      IAG    FGRKGH +        + +KVSGVSLL   +   +KPR
Sbjct:    1 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIR--KC---ARVQLIKNGKKIA-AFVPNDGC--LNYIEENDEVLIAG----FGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPR 141

[Close]

BLAST of GR420693 vs. TrEMBL
Match: C6SZC2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.182e-31
Identity = 95/153 (62.09%), Postives = 101/153 (66.01%), Query Frame = 1

Query:   73 MGKTRGMKSGAARKLHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIV--KRLEFSKQPNSAIREAKCIKNARVQL----KKIAGTFVPNDGCENLNYIE------IAGMKCFFGRKGHVLDRRRYEVVRFMKVSGVSLLE--RSTLQKPR 489
            MGKT GM S    K HRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIV  K    +KQPNSAIR  KC   ARVQL    KKIA  FVPNDGC  LNYIE      IAG    FGRKGH +        + +KVSGVSLL   +   +KPR
Sbjct:    1 MGKTHGMGSARKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIR--KC---ARVQLIRNGKKIA-AFVPNDGC--LNYIEENDEVLIAG----FGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPR 141

[Close]

BLAST of GR420693 vs. TrEMBL
Match: B3TLT7_ELAGV (40S ribosomal protein S23 OS=Elaeis guineensis var. tenera PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.156e-31
Identity = 98/155 (63.23%), Postives = 106/155 (68.39%), Query Frame = 1

Query:   73 MGKTRGMKSGAARKL--HRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIV--KRLEFSKQPNSAIREAKCIKNARVQL----KKIAGTFVPNDGCENLNYIE------IAGMKCFFGRKGHVLDRRRYEVVRFMKVSGVSLLE--RSTLQKPR 489
            MGKTRGM  GAARKL  HRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIV  K    +KQPNSAIR  KC   ARVQL    KKIA  FVPNDGC  LN+IE      IAG    FGRKGH +        + +KVSGVSLL   +   +KPR
Sbjct:    1 MGKTRGM--GAARKLKTHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIR--KC---ARVQLIKNGKKIA-AFVPNDGC--LNFIEENDEVLIAG----FGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPR 141

[Close]

BLAST of GR420693 vs. TrEMBL
Match: D7TQG9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_40.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025626001 PE=4 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.428e-31
Identity = 94/153 (61.44%), Postives = 103/153 (67.32%), Query Frame = 1

Query:   73 MGKTRGMKSGAARKLHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIV--KRLEFSKQPNSAIREAKCIKNARVQL----KKIAGTFVPNDGCENLNYIE------IAGMKCFFGRKGHVLDRRRYEVVRFMKVSGVSLLE--RSTLQKPR 489
            MGKTRGM +G   K HRRRQRWADK+YKKS+LGNEWKKPFAGSSHAKGIV  K    +KQPNSAIR  KC   ARVQL    KKIA  FVPNDGC  LNYIE      IAG    FGRKGH +        + +KVSGVSLL   +   +KPR
Sbjct:   48 MGKTRGMGAGRKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIR--KC---ARVQLIKNGKKIA-AFVPNDGC--LNYIEENDEVLIAG----FGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPR 188

[Close]

BLAST of GR420693 vs. TAIR peptide
Match: AT5G02960.1 (| Symbols: | Ribosomal protein S12/S23 family protein | chr5:693280-694396 REVERSE LENGTH=142)

HSP 1 Score: 132.109 bits (331), Expect = 2.676e-31
Identity = 96/155 (61.94%), Postives = 102/155 (65.81%), Query Frame = 1

Query:   73 MGKTRGMKSGAARKLHRRR--QRWADKSYKKSHLGNEWKKPFAGSSHAKGIV--KRLEFSKQPNSAIREAKCIKNARVQL----KKIAGTFVPNDGCENLNYIE------IAGMKCFFGRKGHVLDRRRYEVVRFMKVSGVSLLE--RSTLQKPR 489
            MGKTRGM  GA RKL R R  QRWADK YKKSHLGNEWKKPFAGSSHAKGIV  K    +KQPNSAIR  KC   ARVQL    KKIA  FVPNDGC  LNYIE      IAG    FGRKGH +        + +KVSGVSLL   +   +KPR
Sbjct:    1 MGKTRGM--GAGRKLKRLRINQRWADKQYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIR--KC---ARVQLIKNGKKIA-AFVPNDGC--LNYIEENDEVLIAG----FGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPR 141

[Close]

BLAST of GR420693 vs. TAIR peptide
Match: AT3G09680.1 (| Symbols: | Ribosomal protein S12/S23 family protein | chr3:2969197-2970291 REVERSE LENGTH=142)

HSP 1 Score: 122.094 bits (305), Expect = 2.769e-28
Identity = 89/153 (58.17%), Postives = 97/153 (63.40%), Query Frame = 1

Query:   73 MGKTRGMKSGAARKLHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIV--KRLEFSKQPNSAIREAKCIKNARVQL----KKIAGTFVPNDGCENLNYIE------IAGMKCFFGRKGHVLDRRRYEVVRFMKVSGVSLLE--RSTLQKPR 489
            MGKTRGM +G   K  R  QRWADK YKKS+ GNEWKKPFA SSHAKGIV  K    +KQPNSAIR  KC   ARVQL    KKIA  FVPNDGC  LNYIE      IAG    FGRKGH +        + +KVSGVSLL   +   +KPR
Sbjct:    1 MGKTRGMGAGRKLKQLRITQRWADKHYKKSNRGNEWKKPFACSSHAKGIVLEKIGIEAKQPNSAIR--KC---ARVQLIKNGKKIA-AFVPNDGC--LNYIEENDEVLIAG----FGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPR 141

The following BLAST results are available for this feature:

BLAST of GR420693 vs. SwissProt
BLAST of GR420693 vs. TrEMBL
BLAST of GR420693 vs. TAIR peptide

BLAST of GR420693 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RS23_FRAAN	4.351e-33	64.52	40S ribosomal protein S23 OS=Fragaria ananassa GN=...	[more]
RS23_EUPES	8.206e-32	63.23	40S ribosomal protein S23 OS=Euphorbia esula GN=RP...	[more]
RS232_ARATH	2.640e-30	61.94	40S ribosomal protein S23-2 OS=Arabidopsis thalian...	[more]
RS231_ARATH	2.732e-27	58.17	40S ribosomal protein S23-1 OS=Arabidopsis thalian...	[more]
RS23_LUMRU	8.225e-24	48.67	40S ribosomal protein S23 OS=Lumbricus rubellus GN...	[more]
RS23_DERVA	1.074e-23	48.00	40S ribosomal protein S23 OS=Dermacentor variabili...	[more]
RS23_SPOFR	3.126e-23	47.33	40S ribosomal protein S23 OS=Spodoptera frugiperda...	[more]
RS23_PAPDA	3.126e-23	47.33	40S ribosomal protein S23 OS=Papilio dardanus GN=R...	[more]
RS23_DROME	6.963e-23	48.00	40S ribosomal protein S23 OS=Drosophila melanogast...	[more]
RS23_RAT	1.313e-21	46.67	40S ribosomal protein S23 OS=Rattus norvegicus GN=...	[more]

BLAST of GR420693 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q38HT5_SOLTU	3.759e-32	62.75	Putative uncharacterized protein OS=Solanum tubero...	[more]
B9SD33_RICCO	1.428e-31	63.87	40S ribosomal protein S23, putative OS=Ricinus com...	[more]
B3TLT8_ELAGV	1.428e-31	63.87	40S ribosomal protein S23 OS=Elaeis guineensis var...	[more]
C6TDD7_SOYBN	2.436e-31	63.87	Putative uncharacterized protein OS=Glycine max PE...	[more]
C5WV32_SORBI	2.436e-31	61.44	Putative uncharacterized protein Sb01g003410 OS=So...	[more]
B4FBY5_MAIZE	2.436e-31	61.44	40S ribosomal protein S23 OS=Zea mays PE=2 SV=1	[more]
A9PBK6_POPTR	2.436e-31	62.09	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
C6SZC2_SOYBN	3.182e-31	62.09	Putative uncharacterized protein OS=Glycine max PE...	[more]
B3TLT7_ELAGV	4.156e-31	63.23	40S ribosomal protein S23 OS=Elaeis guineensis var...	[more]
D7TQG9_VITVI	5.428e-31	61.44	Whole genome shotgun sequence of line PN40024, sca...	[more]

BLAST of GR420693 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT5G02960.1	2.676e-31	61.94	\| Symbols: \| Ribosomal protein S12/S23 family pro...	[more]
AT3G09680.1	2.769e-28	58.17	\| Symbols: \| Ribosomal protein S12/S23 family pro...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006032	Ribosomal protein S12/S23	PFAM	PF00164	Ribosomal_S12	coord: 26..153 score: 5.4
IPR012340	Nucleic acid-binding, OB-fold	GENE3D	2.40.50.140	no description	coord: 31..106 score: 9.8

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR420693 ID=GR420693; Name=GR420693; organism=Cicer arietinum; type=EST; length=675bp
GTAGCGCAGGAGCGTGGCGCTGAGTAGCGACATTTCTCTGATTCCTACTC
AATTTTCACATCACTTGCAATCATGGGGAAAACACGTGGAATGAAGTCCG
GAGCTGCTCGCAAGTTGCACCGTAGAAGGCAGAGGTGGGCTGACAAGTCC
TACAAGAAATCACATCTTGGAAATGAATGGAAGAAGCCATTTGCTGGGTC
ATCTCATGCCAAAGGAATTGTGAAAAGATTGGAATTTTCTAAGCAGCCTA
ACTCTGCTATTAGAGAGGCTAAATGTATCAAAAATGCTCGAGTACAGTTA
AAGAAGATTGCAGGGACTTTTGTTCCAAATGATGGTTGCGAAAATTTGAA
CTACATCGAAATTGCTGGGATGAAGTGCTTTTTTGGCCGAAAAGGGCATG
TCCTGGACCGTCGGAGATATGAGGTCGTCCGATTTATGAAGGTATCAGGA
GTATCTCTTCTTGAGAGAAGCACTCTTCAAAAGCCTAGGAAGGAGTCTTA
AATTATTTATATGAAGAGTTTATGGTTACTATTTGGTTTTTGAATATTTC
AATTGTATGGAGAAGTCCAACATGGTTCGACCATTTTTTCTTCTCTATAT
ATCCAAGTGTTTCAGTTACTATGGCGAATGAACTAGAACCTGTGTACCTG
TTTCAATTTATACAGTGGGCAAAAA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR006032	Ribosomal_uS12
IPR012340	NA-bd_OB-fold

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