GR410120
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR410120 vs. SwissProt
Match: IF2_THEFY (Translation initiation factor IF-2 OS=Thermobifida fusca (strain YX) GN=infB PE=3 SV=1) HSP 1 Score: 51.9878 bits (123), Expect = 6.131e-8 Identity = 43/139 (30.94%), Postives = 52/139 (37.41%), Query Frame = 1 Query: 58 KGGQKKTPKFPKPNKRSPA*H*TRSSTQKGNIKGKKA--KPPKAHSPCPREPPKTRKKPAPRGETSKFPPRTKNPGQGPRGTGEPYEKKAKCPIPKKGPGQGKNPQNKKGEF*RKKNQPGKRTLGET-----NPTPFPG 453 KGGQ+K PKP SP S+ G + A KP P PR PK +P PR E + G +G P K P+PK GP G NP + + P G T P P PG Sbjct: 61 KGGQEKKKPSPKPQP-SPQQQTKASAPSAGGETPRPAVPKPGPGLKPGPRPVPKPGPRPGPRPEGGA--GKAGQQPSGAQGPARPESGKTPRPVPKPGPRPGNNPFSSTASGMGTRPTPRPPASGGTGAPRPGPRPHPG 196 HSP 2 Score: 25.7942 bits (55), Expect = 6.131e-8 Identity = 17/52 (32.69%), Postives = 21/52 (40.38%), Query Frame = 3 Query: 534 RPPAGPPYGKTPHPVEA--KPEDSKGAPKKPGGNTGQTGSRGKMVSRPQSPP 683 RP A P P P A +P S G P +P G S M + +PP Sbjct: 211 RPQAPRPQAPRPGPGTAGGRPGSSAGGPPRPVPRPGPRPSPMNMPASRPTPP 262
BLAST of GR410120 vs. TAIR peptide
Match: AT2G28671.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr2:12300816-12301715 FORWARD LENGTH=299) HSP 1 Score: 44.2838 bits (103), Expect = 6.664e-7 Identity = 29/97 (29.90%), Postives = 34/97 (35.05%), Query Frame = 1 Query: 166 AKPPKAHSPCPREPPKTRKKPAP--RGETSKFPPRTKNPGQGPRGTGEPYEKKAKCPIPKKGPGQGKNPQNKKGEF*RKKNQPGKRTLGETNPTPFP 450 A PP P P PP+ PAP R + PP P GP EP A P G P + G +PG L +P P P Sbjct: 126 APPPPRAEPAPAPPPRAGPAPAPPPRAGPAPAPPPRAEPAPGPPPRAEPVPAPAPVAEPVVGKEPEPPPAKEPGTELAVGRRPGPEPLDGIDPVPAP 222 HSP 2 Score: 26.5646 bits (57), Expect = 6.664e-7 Identity = 15/36 (41.67%), Postives = 18/36 (50.00%), Query Frame = 3 Query: 510 PA*TPMKSRP-PAGPPYGKTPHPVEAKPEDSKGAPK 614 PA P+ P P P P+PVE +P D APK Sbjct: 220 PAPRPLPVEPEPDDPDPAPKPNPVEPEPLDPVPAPK 255 The following BLAST results are available for this feature:
BLAST of GR410120 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 1
BLAST of GR410120 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR410120 ID=GR410120; Name=GR410120; organism=Cicer arietinum; type=EST; length=754bpback to top |