HO062796

EST Overview
NameHO062796
Unique NameHO062796
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length612
Libraries
Library NameType
LIBEST_026409 Chickpea drought stressed cDNA SSH library AB2cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO062796 vs. TrEMBL
Match: B9R7I9_RICCO (Nitrate transporter, putative OS=Ricinus communis GN=RCOM_1592100 PE=4 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.547e-10
Identity = 36/68 (52.94%), Postives = 41/68 (60.29%), Query Frame = -1
Query:   19 IGTS-VXKQLPALGADXFDDKDPKEAAQXXXXXXXXXXXXXSGAILGVTFIVGISANQGWYWSFTVCT 219
            +GTS V   LP++GAD FD+ DPKEAAQ              G I GVTF+V IS NQGW  SF VCT
Sbjct:  122 LGTSGVKSSLPSMGADQFDENDPKEAAQLSSFFNWFLFSLTIGGIFGVTFLVWISTNQGWDLSFGVCT 189          
BLAST of HO062796 vs. TrEMBL
Match: B9GNZ2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_551887 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 6.133e-9
Identity = 36/66 (54.55%), Postives = 39/66 (59.09%), Query Frame = -1
Query:   22 GTS-VXKQLPALGADXFDDKDPKEAAQXXXXXXXXXXXXXSGAILGVTFIVGISANQGWYWSFTVC 216
            GTS V   LP+LGAD FD+ DPKEA+Q              GAILGVT IV IS NQGW   F VC
Sbjct:  114 GTSGVKASLPSLGADQFDENDPKEASQLSSFFNWFLFSITIGAILGVTIIVWISTNQGWDLGFGVC 179          
BLAST of HO062796 vs. TrEMBL
Match: A5AT47_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021648 PE=4 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 1.046e-8
Identity = 36/68 (52.94%), Postives = 41/68 (60.29%), Query Frame = -1
Query:   19 IGTS-VXKQLPALGADXFDDKDPKEAAQXXXXXXXXXXXXXSGAILGVTFIVGISANQGWYWSFTVCT 219
            +GTS V   LPALGAD FD+KDPKEA                GAI GVTF+V IS+NQGW  +F V T
Sbjct:  156 LGTSGVKAALPALGADQFDEKDPKEAPLISTFFNWFLFSLTVGAIFGVTFVVWISSNQGWDLAFGVST 223          
BLAST of HO062796 vs. TrEMBL
Match: B9MVJ4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_591881 PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 2.330e-8
Identity = 35/66 (53.03%), Postives = 39/66 (59.09%), Query Frame = -1
Query:   22 GTSVXKQ-LPALGADXFDDKDPKEAAQXXXXXXXXXXXXXSGAILGVTFIVGISANQGWYWSFTVC 216
            GTS  K  LP+LGAD FD+ DPKEA Q              GAI+GVT IV +SANQGW   F VC
Sbjct:  148 GTSGIKAALPSLGADQFDENDPKEAIQLSSFFNWFLFSLTIGAIIGVTVIVWLSANQGWDLGFGVC 213          
The following BLAST results are available for this feature:
BLAST of HO062796 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
B9R7I9_RICCO5.547e-1052.94Nitrate transporter, putative OS=Ricinus communis ... [more]
B9GNZ2_POPTR6.133e-954.55Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5AT47_VITVI1.046e-852.94Putative uncharacterized protein OS=Vitis vinifera... [more]
B9MVJ4_POPTR2.330e-853.03Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 27..41
score
NoneNo IPR availableSEGsegsegcoord: 19..32
score: NAcoord: 50..70
score: NAcoord: 88..101
score
NoneNo IPR availableSEGsegsegcoord: 30..41
score
NoneNo IPR availablePANTHERPTHR11654OLIGOPEPTIDE TRANSPORTER-RELATEDcoord: 21..79
score: 1.1
NoneNo IPR availablePANTHERPTHR11654:SF21NITRATE TRANSPORTER (NTL1)coord: 21..79
score: 1.1
NoneNo IPR availableSEGsegsegcoord: 40..53
score
NoneNo IPR availableSEGsegsegcoord: 17..25
score
NoneNo IPR availableSEGsegsegcoord: 33..43
score
IPR000109Oligopeptide transporterPFAMPF00854PTR2coord: 22..79
score: 8.1

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO062796 ID=HO062796; Name=HO062796; organism=Cicer arietinum; type=EST; length=612bp
CGAGCGGCCGCCCGGGCAGGTACAAACGGTAAAACTCCAATACCATCCTT
GGTTAGCACTAATCCCAACAATGAAAGTAACCCCAAGTATTGCTCCTGAT
GTAAGGCTAAACAAGAACCAGTTAAAAAAGCTTGATAGTTGAGCTGCTTC
CTTTGGATCTTTATCATCAAACTNATCAGCTCCTAAGGCTGGNAGCTGCT
TTANCACACTTGTTCCTATNCACCAGTAAACCCGTANAAGTATGCACTTG
GCCCCCTACACTTCCNTGTTGTTCCCTTGAGCTCCTNTCTCNAGGAGGTC
TAATTTTGANCNTCNTNANAGTTGGAAACCTTTCCCACCATTTCCTCCCT
CAAACAAAACCAATTTTTAACCCCNACCATAGGTTCCCAAAAGAACCCCC
CTCANTGGGAAAAAAACCGCCCCCCCNAACCGGAAGGGTGGACTCTTTTT
TTAAACTCCCTTATGTTTCCCCCAATAAAATTTTTGGTTCCTGCCTTTCA
NNNCAACCAGTTTCTTTCCCCTCCTCATCTTTATAAAAAGAAGCGTTTCC
CCCACAATCCCCCCCCCTTTGNGGGACTCCGCCCCCACATACAATTCTCC
GCCCCCCCTAGC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0006857oligopeptide transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR000109POT_fam