GR421092

EST Overview


Name	GR421092
Unique Name	GR421092
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	577

Libraries


Library Name	Type
LIBEST_024785 ICCV2 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR421092 vs. SwissProt
Match: RING1_ARATH (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.209e-24
Identity = 68/123 (55.28%), Postives = 80/123 (65.04%), Query Frame = -1

Query:  221 VADQEGASKEDIEQLSILYDSKELRVMINKLVIFKDLNSIGGIMTECRADSPIEHVLAEG-----ICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNILTRGSESSNL 574
            VADQEGASKEDIEQL+  +  ++L    NK    +   +  GIMTEC  DSPIEH L +      ICL +Y+DG ELRE     +FHC+     CVDKWLYINATCPLCKYNIL    +SSNL
Sbjct:  292 VADQEGASKEDIEQLT-KFKFRKLGDA-NKHTNDEAQGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCS-----CVDKWLYINATCPLCKYNIL----KSSNL 403

[Close]

BLAST of GR421092 vs. SwissProt
Match: RING2_ARATH (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 2.977e-23
Identity = 59/114 (51.75%), Postives = 70/114 (61.40%), Query Frame = -1

Query:  248 VADQEGASKEDIEQLSILYDSKELRVMINKLVIFKDLNSIGGIMTECRADSPIEHVLAEG-----ICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNIL 574
            VA+QEGASKEDI+QL+     K    M + +   +     GG+MTEC  DSP+EH L        ICL +Y+D  ELRE     +FHC      CVDKWLYINATCPLCKYNIL
Sbjct:  262 VAEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDSPVEHALPHEDAECCICLSAYEDETELRELPCGHHFHCG-----CVDKWLYINATCPLCKYNIL 370

[Close]

BLAST of GR421092 vs. SwissProt
Match: RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.251e-21
Identity = 58/114 (50.88%), Postives = 68/114 (59.65%), Query Frame = -1

Query:  248 VADQEGASKEDIEQLSILYDSKELRVMINKLVIFKDLNSIGGIMTECRADSPIEHVLAEG-----ICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNIL 574
            VADQEGASK DI+Q+     +K   V        K      GIMTEC  DSPIE  L+       ICLC Y+DGVELRE     +FHC     TC+DKWL+IN+ CPLCK+NIL
Sbjct:  282 VADQEGASKNDIDQMPKFRFTKTGNVE-------KLSGKARGIMTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHC-----TCIDKWLHINSRCPLCKFNIL 383

[Close]

BLAST of GR421092 vs. SwissProt
Match: RIE1_ARATH (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 2.071e-8
Identity = 28/56 (50.00%), Postives = 34/56 (60.71%), Query Frame = -1

Query:  227 ICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNILTRGSESS 394
            ICL SY+DG EL       +FH      TC+ KWL + ATCPLCKYNIL   ++ S
Sbjct:  309 ICLSSYEDGAELHALPCNHHFHS-----TCIVKWLKMRATCPLCKYNILKGTTDQS 359

[Close]

BLAST of GR421092 vs. TrEMBL
Match: B9RC56_RICCO (Cleavage and polyadenylation specificity factor, putative OS=Ricinus communis GN=RCOM_1685450 PE=4 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.618e-26
Identity = 69/120 (57.50%), Postives = 80/120 (66.67%), Query Frame = -1

Query:  236 VADQEGASKEDIEQLSILYDSKELRVMINKLVIFK--DLNSIGGIMTECRADSPIEHVLAEG-----ICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNILTRGS 574
            VADQEGASKEDIEQLS     K  RV  ++ +     +   +GG+MTEC  DSP+EH+L+E      ICL +YDDGVELRE     +FHCA     CVDKWLYINATCPLCKYNIL   S
Sbjct:  266 VADQEGASKEDIEQLSKF---KFRRVDNDEKLTGNGDEQGPLGGVMTECGTDSPVEHILSEEDAECCICLSAYDDGVELRELPCGHHFHCA-----CVDKWLYINATCPLCKYNILKSSS 377

[Close]

BLAST of GR421092 vs. TrEMBL
Match: D7TW51_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019826001 PE=4 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.224e-25
Identity = 68/119 (57.14%), Postives = 79/119 (66.39%), Query Frame = -1

Query:  236 VADQEGASKEDIEQLSILYDSKELRVMINKLVIFKDLN-SIGGIMTECRADSPIEHVLAEG-----ICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNILTRGS 574
            VADQEGASKEDI+QLS      + R + +   I  D+  + GGIMTEC  D+P EHVL++      ICL +YDDGVELRE     +FHC     TCVDKWLYINATCPLCKYNIL   S
Sbjct:  154 VADQEGASKEDIDQLSRF----KFRKVGDIEKIDGDIQGACGGIMTECGTDAPTEHVLSQEDAECCICLSAYDDGVELRELPCGHHFHC-----TCVDKWLYINATCPLCKYNILKSSS 263

[Close]

BLAST of GR421092 vs. TrEMBL
Match: B9DH70_ARATH (AT1G12760 protein OS=Arabidopsis thaliana GN=At1g12760 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.680e-23
Identity = 68/123 (55.28%), Postives = 80/123 (65.04%), Query Frame = -1

Query:  221 VADQEGASKEDIEQLSILYDSKELRVMINKLVIFKDLNSIGGIMTECRADSPIEHVLAEG-----ICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNILTRGSESSNL 574
            VADQEGASKEDIEQL+  +  ++L    NK    +   +  GIMTEC  DSPIEH L +      ICL +Y+DG ELRE     +FHC+     CVDKWLYINATCPLCKYNIL    +SSNL
Sbjct:  221 VADQEGASKEDIEQLT-KFKFRKLGDA-NKHTNDEAQGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCS-----CVDKWLYINATCPLCKYNIL----KSSNL 332

[Close]

BLAST of GR421092 vs. TrEMBL
Match: D7KPC2_ARALY (Protein binding protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_471429 PE=4 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.889e-23
Identity = 67/123 (54.47%), Postives = 77/123 (62.60%), Query Frame = -1

Query:  221 VADQEGASKEDIEQLSILYDSKELRVMINKLVIFKDLNSIGGIMTECRADSPIEHVLAEG-----ICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNILTRGSESSNL 574
            VADQEGASKEDIEQL+     K      N+    +   +  GIMTEC  DSPIEH L +      ICL +Y+DG ELRE     +FHC+     CVDKWLYINATCPLCKYNIL    +SSNL
Sbjct:  219 VADQEGASKEDIEQLTKFKFRKVGDA--NRHTGDEAQGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCS-----CVDKWLYINATCPLCKYNIL----KSSNL 330

[Close]

BLAST of GR421092 vs. TrEMBL
Match: B9GWF0_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_646577 PE=4 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.386e-23
Identity = 64/119 (53.78%), Postives = 77/119 (64.71%), Query Frame = -1

Query:  233 VADQEGASKEDIEQLSILYDSKELRVMINKLVIFKDLNSIGGIMTECRADSPIEHVLAEG-----ICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNILTRGSE 574
            V DQEGASKEDI+QL+     ++    I+KL    D    GGIMTEC  DSP+EHVL+       ICL +Y+DG ELR+     +FHC     TCVDKWLYINATCPLCKY+IL   S+
Sbjct:   65 VTDQEGASKEDIDQLAKFKFRRDGD--IDKLT-GDDQGCSGGIMTECGTDSPMEHVLSGEDAECCICLSAYEDGAELRQLPCGHHFHC-----TCVDKWLYINATCPLCKYDILKSTSQ 175

[Close]

BLAST of GR421092 vs. TrEMBL
Match: D7U7I3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_48.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027503001 PE=4 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.406e-22
Identity = 60/120 (50.00%), Postives = 76/120 (63.33%), Query Frame = -1

Query:  230 VADQEGASKEDIEQLSILYDSKELRVMINKLVIFKDLNSIGGIMTECRADSPIEHVLAEG-----ICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNILTRGSES 574
            VADQEGA+KE+IE+L      K  R+  ++ +  +   S GGIMTEC  D+P+EHV+ +      ICL +Y+D  ELRE      FHC     TC+DKWLYINATCPLCK NIL   S+S
Sbjct:  213 VADQEGATKEEIERLP---KYKFRRIGESEKLNGEIQESFGGIMTECDTDTPMEHVIPQEDAECCICLSAYEDETELRELPCRHRFHC-----TCIDKWLYINATCPLCKLNILKNASQS 324

[Close]

BLAST of GR421092 vs. TrEMBL
Match: A5BAL0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017099 PE=4 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.406e-22
Identity = 60/120 (50.00%), Postives = 76/120 (63.33%), Query Frame = -1

Query:  230 VADQEGASKEDIEQLSILYDSKELRVMINKLVIFKDLNSIGGIMTECRADSPIEHVLAEG-----ICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNILTRGSES 574
            VADQEGA+KE+IE+L      K  R+  ++ +  +   S GGIMTEC  D+P+EHV+ +      ICL +Y+D  ELRE      FHC     TC+DKWLYINATCPLCK NIL   S+S
Sbjct:  226 VADQEGATKEEIERLP---KYKFRRIGESEKLNGEIQESFGGIMTECDTDTPMEHVIPQEDAECCICLSAYEDETELRELPCRHRFHC-----TCIDKWLYINATCPLCKLNILKNASQS 337

[Close]

BLAST of GR421092 vs. TrEMBL
Match: D7KU14_ARALY (Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_893150 PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.221e-22
Identity = 58/114 (50.88%), Postives = 74/114 (64.91%), Query Frame = -1

Query:  248 VADQEGASKEDIEQLSILYDSKELRVMINKLVIFKDLNSIGGIMTECRADSPIEHVLAEG-----ICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNIL 574
            VA+QEGASKEDI+QL+  +  +++   + K  + ++    GG+MTEC  DSP+EH L        ICL +Y+D  ELRE     +FHC      CVDKWLYINATCPLCKYNIL
Sbjct:  256 VAEQEGASKEDIDQLT-KFKFRKVGDSV-KHTVDEEQGDSGGLMTECGTDSPVEHTLPHEDAECCICLSAYEDETELRELPCGHHFHCG-----CVDKWLYINATCPLCKYNIL 362

[Close]

BLAST of GR421092 vs. TrEMBL
Match: Q7XIK9_ORYSJ (Os07g0463400 protein OS=Oryza sativa subsp. japonica GN=OJ1634_H04.119 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.683e-21
Identity = 59/125 (47.20%), Postives = 76/125 (60.80%), Query Frame = -1

Query:  218 VADQEGASKEDIEQLSILYDSKELRVMINKLVIFKDLNS-IGGIMTECRADSPIEHVLAEG-----ICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNILTRGSESSNLG 574
            V DQEGAS+EDI  LS      + R M +   +   + + +GG+MTEC  + P+EH L+       ICLC Y+DG ELRE     +FHC     TC+DKWL+INATCPLCK+NI+      SNLG
Sbjct:  247 VTDQEGASEEDINNLSKF----KFRTMGDADKLVAGIAAPVGGVMTECGTNPPVEHFLSAEDAECCICLCPYEDGAELRELPCNHHFHC-----TCIDKWLHINATCPLCKFNII-----KSNLG 357

[Close]

BLAST of GR421092 vs. TrEMBL
Match: B8B614_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25906 PE=4 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.683e-21
Identity = 59/125 (47.20%), Postives = 76/125 (60.80%), Query Frame = -1

Query:  218 VADQEGASKEDIEQLSILYDSKELRVMINKLVIFKDLNS-IGGIMTECRADSPIEHVLAEG-----ICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNILTRGSESSNLG 574
            V DQEGAS+EDI  LS      + R M +   +   + + +GG+MTEC  + P+EH L+       ICLC Y+DG ELRE     +FHC     TC+DKWL+INATCPLCK+NI+      SNLG
Sbjct:  247 VTDQEGASEEDINNLSKF----KFRTMGDADKLVAGIAAPVGGVMTECGTNPPVEHFLSAEDAECCICLCPYEDGAELRELPCNHHFHC-----TCIDKWLHINATCPLCKFNII-----KSNLG 357

[Close]

BLAST of GR421092 vs. TAIR peptide
Match: AT1G12760.2 (| Symbols: | Zinc finger, C3HC4 type (RING finger) family protein | chr1:4348941-4350512 FORWARD LENGTH=337)

HSP 1 Score: 112.849 bits (281), Expect = 1.281e-25
Identity = 68/123 (55.28%), Postives = 80/123 (65.04%), Query Frame = -1

Query:  221 VADQEGASKEDIEQLSILYDSKELRVMINKLVIFKDLNSIGGIMTECRADSPIEHVLAEG-----ICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNILTRGSESSNL 574
            VADQEGASKEDIEQL+  +  ++L    NK    +   +  GIMTEC  DSPIEH L +      ICL +Y+DG ELRE     +FHC+     CVDKWLYINATCPLCKYNIL    +SSNL
Sbjct:  221 VADQEGASKEDIEQLT-KFKFRKLGDA-NKHTNDEAQGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCS-----CVDKWLYINATCPLCKYNIL----KSSNL 332

[Close]

BLAST of GR421092 vs. TAIR peptide
Match: AT1G12760.1 (| Symbols: | Zinc finger, C3HC4 type (RING finger) family protein | chr1:4348728-4350512 FORWARD LENGTH=408)

HSP 1 Score: 112.849 bits (281), Expect = 1.281e-25
Identity = 68/123 (55.28%), Postives = 80/123 (65.04%), Query Frame = -1

Query:  221 VADQEGASKEDIEQLSILYDSKELRVMINKLVIFKDLNSIGGIMTECRADSPIEHVLAEG-----ICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNILTRGSESSNL 574
            VADQEGASKEDIEQL+  +  ++L    NK    +   +  GIMTEC  DSPIEH L +      ICL +Y+DG ELRE     +FHC+     CVDKWLYINATCPLCKYNIL    +SSNL
Sbjct:  292 VADQEGASKEDIEQLT-KFKFRKLGDA-NKHTNDEAQGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCS-----CVDKWLYINATCPLCKYNIL----KSSNL 403

[Close]

BLAST of GR421092 vs. TAIR peptide
Match: AT1G63170.1 (| Symbols: | Zinc finger, C3HC4 type (RING finger) family protein | chr1:23425574-23427073 FORWARD LENGTH=381)

HSP 1 Score: 108.227 bits (269), Expect = 3.156e-24
Identity = 59/114 (51.75%), Postives = 70/114 (61.40%), Query Frame = -1

Query:  248 VADQEGASKEDIEQLSILYDSKELRVMINKLVIFKDLNSIGGIMTECRADSPIEHVLAEG-----ICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNIL 574
            VA+QEGASKEDI+QL+     K    M + +   +     GG+MTEC  DSP+EH L        ICL +Y+D  ELRE     +FHC      CVDKWLYINATCPLCKYNIL
Sbjct:  262 VAEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDSPVEHALPHEDAECCICLSAYEDETELRELPCGHHFHCG-----CVDKWLYINATCPLCKYNIL 370

[Close]

BLAST of GR421092 vs. TAIR peptide
Match: AT4G11680.1 (| Symbols: | Zinc finger, C3HC4 type (RING finger) family protein | chr4:7053737-7055516 REVERSE LENGTH=390)

HSP 1 Score: 102.834 bits (255), Expect = 1.326e-22
Identity = 58/114 (50.88%), Postives = 68/114 (59.65%), Query Frame = -1

Query:  248 VADQEGASKEDIEQLSILYDSKELRVMINKLVIFKDLNSIGGIMTECRADSPIEHVLAEG-----ICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNIL 574
            VADQEGASK DI+Q+     +K   V        K      GIMTEC  DSPIE  L+       ICLC Y+DGVELRE     +FHC     TC+DKWL+IN+ CPLCK+NIL
Sbjct:  282 VADQEGASKNDIDQMPKFRFTKTGNVE-------KLSGKARGIMTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHC-----TCIDKWLHINSRCPLCKFNIL 383

[Close]

BLAST of GR421092 vs. TAIR peptide
Match: AT3G61180.1 (| Symbols: | RING/U-box superfamily protein | chr3:22645680-22647290 FORWARD LENGTH=379)

HSP 1 Score: 91.6633 bits (226), Expect = 3.057e-19
Identity = 56/122 (45.90%), Postives = 70/122 (57.38%), Query Frame = -1

Query:  224 VADQEGASKEDIEQLSILYDSKELRVMINKLVIFKDLNSIGGIMTECRADSPIEHVLAE-----GICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNILTRGSESSN 574
            +ADQEGA  E+IE+L      K L V  ++ V  +   + GGIMT    +S  E +L        ICLC+Y+DGVELRE     +FH       CVDKWL INATCPLCK+NIL  G  S +
Sbjct:  263 LADQEGAPDEEIERL---LKFKFLTVKNSEKVNGEIRETQGGIMTGLDTESQTERMLLSEDAECSICLCAYEDGVELRELPCRHHFHSL-----CVDKWLRINATCPLCKFNILKNGEPSGS 376

[Close]

BLAST of GR421092 vs. TAIR peptide
Match: AT1G68070.1 (| Symbols: | Zinc finger, C3HC4 type (RING finger) family protein | chr1:25515412-25516767 REVERSE LENGTH=343)

HSP 1 Score: 59.3066 bits (142), Expect = 1.681e-9
Identity = 51/122 (41.80%), Postives = 61/122 (50.00%), Query Frame = -1

Query:  233 VADQEGASKEDIEQLSILYDSKELRVMINKLVIFKDLNSIGGIMTECRADSPI---EHVLAEG-----ICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNILTRGSE 574
            VA QEGAS+ D   LSIL        M N     +  +  GG M    A S     E VL        ICL SY+DG EL       +FH      TC+ KWL +NATCPLCK+NIL +G+E
Sbjct:  234 VAGQEGASEAD---LSIL-PKYRFHTMNND----EKQSDGGGKMIPVDAASENLGNERVLLPEDADCCICLSSYEDGAELVSLPCNHHFHS-----TCIVKWLKMNATCPLCKFNIL-KGNE 341

[Close]

BLAST of GR421092 vs. TAIR peptide
Match: AT2G01735.1 (| Symbols: RIE1 | RING-finger protein for embryogenesis | chr2:324499-325895 FORWARD LENGTH=359)

HSP 1 Score: 58.9214 bits (141), Expect = 2.196e-9
Identity = 28/56 (50.00%), Postives = 34/56 (60.71%), Query Frame = -1

Query:  227 ICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNILTRGSESS 394
            ICL SY+DG EL       +FH      TC+ KWL + ATCPLCKYNIL   ++ S
Sbjct:  309 ICLSSYEDGAELHALPCNHHFHS-----TCIVKWLKMRATCPLCKYNILKGTTDQS 359

[Close]

BLAST of GR421092 vs. TAIR peptide
Match: AT4G32600.1 (| Symbols: | RING/U-box superfamily protein | chr4:15724010-15725737 FORWARD LENGTH=453)

HSP 1 Score: 53.5286 bits (127), Expect = 9.225e-8
Identity = 27/63 (42.86%), Postives = 36/63 (57.14%), Query Frame = -1

Query:  206 ICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNILTRGSESSNLG*MIS 394
            ICL  Y +  ELRE     +FH       CVDKWL INA+CPLCK  +  + S+ ++ G + S
Sbjct:  365 ICLAKYANNEELRELPCSHFFH-----KECVDKWLKINASCPLCKSEVGEKNSDLTSQGILTS 422

[Close]

BLAST of GR421092 vs. TAIR peptide
Match: AT1G80400.1 (| Symbols: | RING/U-box superfamily protein | chr1:30225864-30227360 FORWARD LENGTH=407)

HSP 1 Score: 53.5286 bits (127), Expect = 9.225e-8
Identity = 28/56 (50.00%), Postives = 31/56 (55.36%), Query Frame = -1

Query:  227 ICLCSYDDGVELREQDAECYFHCAFLVVTCVDKWLYINATCPLCKYNILTRGSESS 394
            ICL  Y D  ++RE      FH     V CVDKWL INATCPLCK  +    S SS
Sbjct:  357 ICLTRYGDDEQVRELPCSHVFH-----VDCVDKWLKINATCPLCKNEVGESSSASS 407

The following BLAST results are available for this feature:

BLAST of GR421092 vs. SwissProt
BLAST of GR421092 vs. TrEMBL
BLAST of GR421092 vs. TAIR peptide

BLAST of GR421092 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 4


Match Name	E-value	Identity	Description
RING1_ARATH	1.209e-24	55.28	E3 ubiquitin-protein ligase At1g12760 OS=Arabidops...	[more]
RING2_ARATH	2.977e-23	51.75	E3 ubiquitin-protein ligase At1g63170 OS=Arabidops...	[more]
RING4_ARATH	1.251e-21	50.88	E3 ubiquitin-protein ligase At4g11680 OS=Arabidops...	[more]
RIE1_ARATH	2.071e-8	50.00	E3 ubiquitin protein ligase RIE1 OS=Arabidopsis th...	[more]

BLAST of GR421092 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9RC56_RICCO	3.618e-26	57.50	Cleavage and polyadenylation specificity factor, p...	[more]
D7TW51_VITVI	5.224e-25	57.14	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9DH70_ARATH	1.680e-23	55.28	AT1G12760 protein OS=Arabidopsis thaliana GN=At1g1...	[more]
D7KPC2_ARALY	4.889e-23	54.47	Protein binding protein OS=Arabidopsis lyrata subs...	[more]
B9GWF0_POPTR	6.386e-23	53.78	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
D7U7I3_VITVI	5.406e-22	50.00	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5BAL0_VITVI	5.406e-22	50.00	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D7KU14_ARALY	9.221e-22	50.88	Zinc finger family protein OS=Arabidopsis lyrata s...	[more]
Q7XIK9_ORYSJ	2.683e-21	47.20	Os07g0463400 protein OS=Oryza sativa subsp. japoni...	[more]
B8B614_ORYSI	2.683e-21	47.20	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of GR421092 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 9


Match Name	E-value	Identity	Description
AT1G12760.2	1.281e-25	55.28	\| Symbols: \| Zinc finger, C3HC4 type (RING finger...	[more]
AT1G12760.1	1.281e-25	55.28	\| Symbols: \| Zinc finger, C3HC4 type (RING finger...	[more]
AT1G63170.1	3.156e-24	51.75	\| Symbols: \| Zinc finger, C3HC4 type (RING finger...	[more]
AT4G11680.1	1.326e-22	50.88	\| Symbols: \| Zinc finger, C3HC4 type (RING finger...	[more]
AT3G61180.1	3.057e-19	45.90	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT1G68070.1	1.681e-9	41.80	\| Symbols: \| Zinc finger, C3HC4 type (RING finger...	[more]
AT2G01735.1	2.196e-9	50.00	\| Symbols: RIE1 \| RING-finger protein for embryoge...	[more]
AT4G32600.1	9.225e-8	42.86	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT1G80400.1	9.225e-8	50.00	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	no description	coord: 62..109 score: 3.2
None	No IPR available	PANTHER	PTHR14155	RING FINGER PROTEIN 6/12/38	coord: 91..105 score: 6.1
None	No IPR available	PANTHER	PTHR14155:SF2	RING FINGER PROTEIN 38	coord: 91..105 score: 6.1

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR421092 ID=GR421092; Name=GR421092; organism=Cicer arietinum; type=EST; length=577bp
AAACAGTTAGAAACTGAACAACTCTGATATACACTCCTACAAATACTCAA
AGCAACTCACAATAAATCGCTACATTATAACAGTGCCTATTATAATCATA
GGCATGTAACAACAATGACAATTGCACAAAGATGCAACGGAAAAGTATTG
ACATGTTATGCGGATTCCTAAAAAAGTCAAAATGGCGCGAATCTACAAAC
TTTTCTGAAATCATCTAACCGAGGTTACTACTTTCACTTCCTCTTGTCAA
GATGTTATATTTGCAGAGGGGGCATGTAGCATTAATATACAGCCATTTAT
CCACACAGGTGACCACAAGGAAGGCACAGTGAAAATAACATTCCGCATCC
TGTTCTCTTAGTTCAACTCCATCGTCATAAGAACAAAGGCAGATGCCCTC
AGCTAGAACATGTTCAATAGGTGAATCAGCCCGGCATTCAGTCATTATTC
CTCCAATTGAATTCAGGTCCTTGAATATTACCAGTTTGTTTATCATTACT
CTCAACTCTTTGGAATCATAAAGAATTGACAACTGCTCAATGTCTTCCTT
TGATGCCCCTTCCTGGTCTGCAACAGG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD

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