HO062652

EST Overview
NameHO062652
Unique NameHO062652
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length622
Libraries
Library NameType
LIBEST_026408 Chickpea drought stressed cDNA SSH library AB1cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO062652 vs. TrEMBL
Match: C6T9X6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.194e-14
Identity = 37/44 (84.09%), Postives = 42/44 (95.45%), Query Frame = 3
Query:    3 ACPLSTPNGRMEGEFEMIHVERVGSRSFNVVIAPFSLALLGDDD 134
            ACPL+TPNGRMEG++EMIH ERVGSRSFNV IAPFSL+LLGDD+
Sbjct:  108 ACPLNTPNGRMEGDYEMIHFERVGSRSFNVAIAPFSLSLLGDDE 151          
BLAST of HO062652 vs. TrEMBL
Match: C5Z144_SORBI (Putative uncharacterized protein Sb09g005200 OS=Sorghum bicolor GN=Sb09g005200 PE=4 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.503e-12
Identity = 32/44 (72.73%), Postives = 40/44 (90.91%), Query Frame = 3
Query:    3 ACPLSTPNGRMEGEFEMIHVERVGSRSFNVVIAPFSLALLGDDD 134
            ACPLSTPNGRMEG+FEM H+++ GS +FNV IAPFSL++LGDD+
Sbjct:  243 ACPLSTPNGRMEGDFEMKHIDKAGSSTFNVAIAPFSLSILGDDN 286          
BLAST of HO062652 vs. TrEMBL
Match: C0PFK9_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.503e-12
Identity = 32/44 (72.73%), Postives = 40/44 (90.91%), Query Frame = 3
Query:    3 ACPLSTPNGRMEGEFEMIHVERVGSRSFNVVIAPFSLALLGDDD 134
            ACPLSTPNGRMEG+FEM H+++ GS +FNV IAPFSL++LGDD+
Sbjct:  243 ACPLSTPNGRMEGDFEMKHIDKAGSSTFNVAIAPFSLSILGDDN 286          
BLAST of HO062652 vs. TrEMBL
Match: B6TZ52_MAIZE (UvrB/uvrC motif family protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.503e-12
Identity = 32/44 (72.73%), Postives = 40/44 (90.91%), Query Frame = 3
Query:    3 ACPLSTPNGRMEGEFEMIHVERVGSRSFNVVIAPFSLALLGDDD 134
            ACPLSTPNGRMEG+FEM H+++ GS +FNV IAPFSL++LGDD+
Sbjct:  243 ACPLSTPNGRMEGDFEMKHIDKAGSSTFNVAIAPFSLSILGDDN 286          
BLAST of HO062652 vs. TrEMBL
Match: D7SHQ3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00007727001 PE=4 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.975e-12
Identity = 32/43 (74.42%), Postives = 40/43 (93.02%), Query Frame = 3
Query:    3 ACPLSTPNGRMEGEFEMIHVERVGSRSFNVVIAPFSLALLGDD 131
            ACPLSTPNGRMEG+FEM H+++VGS++FNV IAPFSL+ LGD+
Sbjct:  327 ACPLSTPNGRMEGDFEMKHIDKVGSQTFNVAIAPFSLSTLGDE 369          
BLAST of HO062652 vs. TrEMBL
Match: A5C5D8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003764 PE=4 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.975e-12
Identity = 32/43 (74.42%), Postives = 40/43 (93.02%), Query Frame = 3
Query:    3 ACPLSTPNGRMEGEFEMIHVERVGSRSFNVVIAPFSLALLGDD 131
            ACPLSTPNGRMEG+FEM H+++VGS++FNV IAPFSL+ LGD+
Sbjct:  175 ACPLSTPNGRMEGDFEMKHIDKVGSQTFNVAIAPFSLSTLGDE 217          
BLAST of HO062652 vs. TrEMBL
Match: Q65XS0_ORYSJ (Os05g0170800 protein OS=Oryza sativa subsp. japonica GN=P0685E10.9 PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.804e-12
Identity = 31/44 (70.45%), Postives = 40/44 (90.91%), Query Frame = 3
Query:    3 ACPLSTPNGRMEGEFEMIHVERVGSRSFNVVIAPFSLALLGDDD 134
            ACPL+TPNGRMEG+FEM H+++ GS +FNV IAPFSL++LGDD+
Sbjct:  252 ACPLNTPNGRMEGDFEMKHIDKAGSSTFNVAIAPFSLSILGDDN 295          
BLAST of HO062652 vs. TrEMBL
Match: B9FHY6_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_17287 PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.804e-12
Identity = 31/44 (70.45%), Postives = 40/44 (90.91%), Query Frame = 3
Query:    3 ACPLSTPNGRMEGEFEMIHVERVGSRSFNVVIAPFSLALLGDDD 134
            ACPL+TPNGRMEG+FEM H+++ GS +FNV IAPFSL++LGDD+
Sbjct:  252 ACPLNTPNGRMEGDFEMKHIDKAGSSTFNVAIAPFSLSILGDDN 295          
BLAST of HO062652 vs. TrEMBL
Match: A2Y0U8_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18629 PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.804e-12
Identity = 31/44 (70.45%), Postives = 40/44 (90.91%), Query Frame = 3
Query:    3 ACPLSTPNGRMEGEFEMIHVERVGSRSFNVVIAPFSLALLGDDD 134
            ACPL+TPNGRMEG+FEM H+++ GS +FNV IAPFSL++LGDD+
Sbjct:  252 ACPLNTPNGRMEGDFEMKHIDKAGSSTFNVAIAPFSLSILGDDN 295          
BLAST of HO062652 vs. TrEMBL
Match: B9RB09_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1510420 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.873e-11
Identity = 31/43 (72.09%), Postives = 39/43 (90.70%), Query Frame = 3
Query:    3 ACPLSTPNGRMEGEFEMIHVERVGSRSFNVVIAPFSLALLGDD 131
            ACPLSTP+GRMEG+FEM H++RVGS +FNV IAPFSL++L D+
Sbjct:  244 ACPLSTPSGRMEGDFEMKHIDRVGSSTFNVAIAPFSLSILADE 286          
The following BLAST results are available for this feature:
BLAST of HO062652 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6T9X6_SOYBN2.194e-1484.09Putative uncharacterized protein OS=Glycine max PE... [more]
C5Z144_SORBI3.503e-1272.73Putative uncharacterized protein Sb09g005200 OS=So... [more]
C0PFK9_MAIZE3.503e-1272.73Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
B6TZ52_MAIZE3.503e-1272.73UvrB/uvrC motif family protein OS=Zea mays PE=2 SV... [more]
D7SHQ3_VITVI5.975e-1274.42Whole genome shotgun sequence of line PN40024, sca... [more]
A5C5D8_VITVI5.975e-1274.42Putative uncharacterized protein OS=Vitis vinifera... [more]
Q65XS0_ORYSJ7.804e-1270.45Os05g0170800 protein OS=Oryza sativa subsp. japoni... [more]
B9FHY6_ORYSJ7.804e-1270.45Putative uncharacterized protein OS=Oryza sativa s... [more]
A2Y0U8_ORYSI7.804e-1270.45Putative uncharacterized protein OS=Oryza sativa s... [more]
B9RB09_RICCO3.873e-1172.09Putative uncharacterized protein OS=Ricinus commun... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000892Ribosomal protein S26ePANTHERPTHR1253840S RIBOSOMAL PROTEIN S26coord: 19..74
score: 1.6
IPR000892Ribosomal protein S26ePFAMPF01283Ribosomal_S26ecoord: 18..53
score: 1.5
IPR000892Ribosomal protein S26ePROSITEPS00733RIBOSOMAL_S26Ecoord: 19..26
score
NoneNo IPR availableSEGsegsegcoord: 29..41
score: NAcoord: 54..75
score
NoneNo IPR availableSEGsegsegcoord: 9..22
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO062652 ID=HO062652; Name=HO062652; organism=Cicer arietinum; type=EST; length=622bp
CGGCATGCCCATTAAGCACACCAAATGGTAGAATGGAAGGTGAATTTGAG
ATGATCCATGTTGAGAGAGTAGGCTCGCGTTCATTTAATGTGGTCATTGC
TCCGTTTTCTCTCGCTCTGCTTGGAGATGATGACTGCAATACTATTTGAG
AATTGAGATCAAACTGCAACATCACCTTCAGTGATCATGTCCATTTATTA
GCACCCCGAGTGTGGAAAGGAAAAGATTATCGTTCTCACCACCATTCTGA
GAATAAACTATACAAATATATATGTACCTGCCCGGGCGGTCGAGCGGCCG
CCCGGGCAGGTACTGTGTTTCATGTGCTATCCATTCTCATGTTGTGAGGG
TTAGATCTCGCACTGATAGGAGGGAGCGTGACCCTCCTCAGCGTTTCGTC
AGGCGCAGGGATGATGCCCCAAGGCCTGGTCAGCCTGGTCAAGCACCTCG
CCCTGCCGTAGCTGGAGCTGCTCCTGCCCGTACCTGAGATAATTTCAAGA
TTTTTGATCTTTCATGTCCCAAACTCAGTTTCCTTTGCTTGTTTTTAAAT
TTTTGGTTTCATGTAGACACAATATATTGTTGCTTTATTGCTTTAGTTCT
TGGGCAATACTTACATTTTTGC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular anatomical structure
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR000892Ribosomal_eS26