AM161978
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of AM161978 vs. TrEMBL
Match: Q2PEU1_TRIPR (Putative uncharacterized protein OS=Trifolium pratense PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.611e-22 Identity = 56/77 (72.73%), Postives = 59/77 (76.62%), Query Frame = 3 Query: 21 MALQGKLDRFKKQQEKCQXXXXXXXXXXXXXXXMPTSLVPVKFSTDTERLQHINSIRKAPVGAQMKRVIDLLYETRQ 251 MALQGKLDRFKKQQEKC +P+ LVPVKFS DTERLQHINSIRKAPVGAQMKRVIDLL+ETRQ Sbjct: 1 MALQGKLDRFKKQQEKCASTLSSIAASKAASSAVPSPLVPVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLFETRQ 77
BLAST of AM161978 vs. TrEMBL
Match: C6TCR2_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 6.554e-16 Identity = 51/86 (59.30%), Postives = 53/86 (61.63%), Query Frame = 3 Query: 21 MALQGKLDRFKKQQEKCQXXXXXXXXXXXXXXXMPTS---------LVPVKFSTDTERLQHINSIRKAPVGAQMKRVIDLLYETRQ 251 MALQ KLD+FKKQQEKCQ + VKFS DTERLQHINSIRKAPVGAQMKRVIDLL ETRQ Sbjct: 1 MALQEKLDKFKKQQEKCQTTLSSIAASKAAATQKSAAHGSANGRNAAPAVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLLETRQ 86
BLAST of AM161978 vs. TrEMBL
Match: B7FIV7_MEDTR (Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.253e-15 Identity = 51/90 (56.67%), Postives = 55/90 (61.11%), Query Frame = 3 Query: 21 MALQGKLDRFKKQQEKCQXXXXXXXXXXXXXXXMPTSLVP-------------VKFSTDTERLQHINSIRKAPVGAQMKRVIDLLYETRQ 251 MALQ +LDRFKKQQEKCQ T +V VKFS+DTERLQ IN+IRKAPVGAQMKRVIDLL ETRQ Sbjct: 1 MALQEQLDRFKKQQEKCQSTLSSIASSKVGSRKPNTPVVATNASANGRNSRTGVKFSSDTERLQQINNIRKAPVGAQMKRVIDLLLETRQ 90
BLAST of AM161978 vs. TrEMBL
Match: B9GKK9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_640520 PE=4 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.548e-15 Identity = 50/92 (54.35%), Postives = 53/92 (57.61%), Query Frame = 3 Query: 21 MALQGKLDRFKKQQEKCQXXXXXXXXXXXXXXXMPTSLVPV---------------KFSTDTERLQHINSIRKAPVGAQMKRVIDLLYETRQ 251 MALQ +LDRFKKQQEKCQ + V V KFS DTERLQHINSIRKAP GAQ+KRVIDLL ETRQ Sbjct: 1 MALQEQLDRFKKQQEKCQSTLTSIAKSRPSKSSLTQKTVAVAPAPSTSARTPAPAVKFSNDTERLQHINSIRKAPAGAQIKRVIDLLLETRQ 92
BLAST of AM161978 vs. TrEMBL
Match: D7SPJ4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019026001 PE=4 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 9.464e-15 Identity = 50/88 (56.82%), Postives = 54/88 (61.36%), Query Frame = 3 Query: 21 MALQGKLDRFKKQQEKCQXXXXXXXXXXXXXXX-MPTSLVP----------VKFSTDTERLQHINSIRKAPVGAQMKRVIDLLYETRQ 251 MALQ L +FKKQQEKCQ +P + P VKFS DTERLQHINSIRKAPVGAQ+KRVIDLL ETRQ Sbjct: 1 MALQESLAKFKKQQEKCQSTLTSIAAKAVSSKPSVPQNFTPAAPTKPPTPAVKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQ 88
BLAST of AM161978 vs. TrEMBL
Match: D7TW30_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019802001 PE=4 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.236e-14 Identity = 50/88 (56.82%), Postives = 53/88 (60.23%), Query Frame = 3 Query: 21 MALQGKLDRFKKQQEKCQXXXXXXXXXXXXXXX-MPTSLVP----------VKFSTDTERLQHINSIRKAPVGAQMKRVIDLLYETRQ 251 MALQ L +FKKQQEKCQ +P P VKFS DTERLQHINSIRKAPVGAQ+KRVIDLL ETRQ Sbjct: 1 MALQESLAKFKKQQEKCQSTLTSIAAKAGSSKPTVPQKFTPAAPTKPPTPAVKFSNDTERLQHINSIRKAPVGAQIKRVIDLLLETRQ 88
BLAST of AM161978 vs. TrEMBL
Match: B9RC71_RICCO (Transcription initiation factor IIE subunit beta, putative OS=Ricinus communis GN=RCOM_1686000 PE=4 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.596e-14 Identity = 47/90 (52.22%), Postives = 57/90 (63.33%), Query Frame = 3 Query: 21 MALQGKLDRFKKQQEKCQXXXXXXXXXXXXXXXM-------PTSLVP------VKFSTDTERLQHINSIRKAPVGAQMKRVIDLLYETRQ 251 M LQ +L++FK+QQEKCQ P+ ++P VKFS DTERLQHI+SIRKAPVGAQ+KRVIDLL+ETRQ Sbjct: 1 MDLQEQLNKFKRQQEKCQTTLTSIAAKAGSHKPSITPKIVAPSPIIPRTPGPAVKFSNDTERLQHIHSIRKAPVGAQIKRVIDLLFETRQ 90
BLAST of AM161978 vs. TrEMBL
Match: C6TE63_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.044e-13 Identity = 43/77 (55.84%), Postives = 49/77 (63.64%), Query Frame = 3 Query: 21 MALQGKLDRFKKQQEKCQXXXXXXXXXXXXXXXMPTSLVPVKFSTDTERLQHINSIRKAPVGAQMKRVIDLLYETRQ 251 MA Q K +RFK+Q EK P+KFS DTERLQH+NSIRKAPVGAQMKRVIDLL+ETR+ Sbjct: 1 MAFQEKQNRFKRQPEKSASASQYGRTP-----------APIKFSNDTERLQHVNSIRKAPVGAQMKRVIDLLFETRK 66
BLAST of AM161978 vs. TrEMBL
Match: Q9SUP3_ARATH (AT4g20330/F9F13_2 OS=Arabidopsis thaliana GN=AT4g20330 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.858e-13 Identity = 45/89 (50.56%), Postives = 55/89 (61.80%), Query Frame = 3 Query: 21 MALQGKLDRFKKQQEKCQXXXXXXXXXXXXXXX------MPTSLV-------PVKFSTDTERLQHINSIRKAPVGAQMKRVIDLLYETR 248 MAL+ +LD+F KQQ KCQ +P ++ PVKFS+DTERLQ+IN+IRKAPVGAQ+KRVIDLLYE R Sbjct: 1 MALKEQLDKFNKQQVKCQSTLSSIASSRERTSSSRQNVPLPAAITQKKPDAAPVKFSSDTERLQNINNIRKAPVGAQIKRVIDLLYERR 89
BLAST of AM161978 vs. TrEMBL
Match: D7MFK5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_492835 PE=4 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.366e-12 Identity = 44/89 (49.44%), Postives = 52/89 (58.43%), Query Frame = 3 Query: 21 MALQGKLDRFKKQQEKCQXXXXXXXXXXXXXXXMPTSL-------------VPVKFSTDTERLQHINSIRKAPVGAQMKRVIDLLYETR 248 MAL+ +LD+F KQQ KCQ S+ PVKFS DTERLQ+IN+IRKAPVGAQ+KRVIDLL+E R Sbjct: 1 MALKEQLDKFNKQQVKCQSTLSSIASSRERTGSSRQSVPLPAAISQKKPDAAPVKFSNDTERLQNINNIRKAPVGAQIKRVIDLLFEKR 89
BLAST of AM161978 vs. TAIR peptide
Match: AT4G20330.1 (| Symbols: | Transcription initiation factor TFIIE, beta subunit | chr4:10982683-10984039 REVERSE LENGTH=286) HSP 1 Score: 76.6406 bits (187), Expect = 3.439e-15 Identity = 45/89 (50.56%), Postives = 55/89 (61.80%), Query Frame = 3 Query: 21 MALQGKLDRFKKQQEKCQXXXXXXXXXXXXXXX------MPTSLV-------PVKFSTDTERLQHINSIRKAPVGAQMKRVIDLLYETR 248 MAL+ +LD+F KQQ KCQ +P ++ PVKFS+DTERLQ+IN+IRKAPVGAQ+KRVIDLLYE R Sbjct: 1 MALKEQLDKFNKQQVKCQSTLSSIASSRERTSSSRQNVPLPAAITQKKPDAAPVKFSSDTERLQNINNIRKAPVGAQIKRVIDLLYERR 89
BLAST of AM161978 vs. TAIR peptide
Match: AT4G21010.1 (| Symbols: | Transcription initiation factor TFIIE, beta subunit | chr4:11226317-11227363 REVERSE LENGTH=275) HSP 1 Score: 62.3882 bits (150), Expect = 6.712e-11 Identity = 39/88 (44.32%), Postives = 50/88 (56.82%), Query Frame = 3 Query: 21 MALQGKLDRFKKQQEKCQXXXXXXXXXXXXXXXMPTSLVPV------------KFSTDTERLQHINSIRKAPVGAQMKRVIDLLYETR 248 MAL+ +LD+F KQQEKCQ + S VP KFS +T++LQHI +IR + VGAQMK VIDLL++TR Sbjct: 1 MALREQLDKFNKQQEKCQSTLSSISSSRTA---LSRSYVPAATTSQKPNVFRGKFSENTKQLQHITNIRNSAVGAQMKIVIDLLFKTR 85 The following BLAST results are available for this feature:
BLAST of AM161978 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of AM161978 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >AM161978 ID=AM161978; Name=AM161978; organism=Pisum sativum; type=EST; length=252bpback to top |