GT619373

EST Overview


Name	GT619373
Unique Name	GT619373
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	433

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

[Close]

BLAST of GT619373 vs. TrEMBL
Match: B9RIU5_RICCO (DELLA protein GAI, putative OS=Ricinus communis GN=RCOM_1582830 PE=4 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.313e-28
Identity = 61/79 (77.22%), Postives = 67/79 (84.81%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPGSRV----TVNEENGGVCFGWMGRTLTVASAWR 225
            VA EGRDRVERCEVFGKWRARM MAGF L PVSQ + ES+KARL+ G+RV    TV E+NGGVCFGWMG+TLTVASAWR
Sbjct:  537 VACEGRDRVERCEVFGKWRARMGMAGFELKPVSQNIAESLKARLSSGNRVNPGFTVKEDNGGVCFGWMGKTLTVASAWR 615

[Close]

BLAST of GT619373 vs. TrEMBL
Match: B9MWZ8_POPTR (GRAS family transcription factor OS=Populus trichocarpa GN=GRAS47 PE=4 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 8.994e-26
Identity = 59/79 (74.68%), Postives = 65/79 (82.28%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPGSRV----TVNEENGGVCFGWMGRTLTVASAWR 225
            VA EGRDR+ERCEVFGKWRARM MAGF L P+SQ V ES+KARL+  +RV    TV EENGGVCFGW G+TLTVASAWR
Sbjct:  588 VACEGRDRIERCEVFGKWRARMGMAGFELKPMSQIVAESMKARLSLTNRVNPGFTVKEENGGVCFGWKGKTLTVASAWR 666

[Close]

BLAST of GT619373 vs. TrEMBL
Match: B9H3H7_POPTR (GRAS family transcription factor OS=Populus trichocarpa GN=GRAS48 PE=4 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.534e-25
Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPGSRV----TVNEENGGVCFGWMGRTLTVASAWR 225
            VA EGRDRVERCEVFGKWRARM MAGF L P+S  + ES+K RL+  +RV    +V EENGGVCFGWMG+TLTVASAWR
Sbjct:  562 VACEGRDRVERCEVFGKWRARMGMAGFELKPLSHNIAESMKTRLSLANRVNPGFSVKEENGGVCFGWMGKTLTVASAWR 640

[Close]

BLAST of GT619373 vs. TrEMBL
Match: A9PF09_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.534e-25
Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPGSRV----TVNEENGGVCFGWMGRTLTVASAWR 225
            VA EGRDRVERCEVFGKWRARM MAGF L P+S  + ES+K RL+  +RV    +V EENGGVCFGWMG+TLTVASAWR
Sbjct:  443 VACEGRDRVERCEVFGKWRARMGMAGFELKPLSHNIAESMKTRLSLANRVNPGFSVKEENGGVCFGWMGKTLTVASAWR 521

[Close]

BLAST of GT619373 vs. TrEMBL
Match: Q00LP0_SOLLC (GRAS10 OS=Solanum lycopersicum GN=GRAS10 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.464e-25
Identity = 57/79 (72.15%), Postives = 65/79 (82.28%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPGSR----VTVNEENGGVCFGWMGRTLTVASAWR 225
            VA EGRDRVERCEVFGKWRARMSMAGF   PVSQ V  S++++L  G+R     TVNE++GG+CFGWMGRTLTVASAWR
Sbjct:  553 VACEGRDRVERCEVFGKWRARMSMAGFGPKPVSQIVANSLRSKLNSGTRGNPGFTVNEQSGGICFGWMGRTLTVASAWR 631

[Close]

BLAST of GT619373 vs. TrEMBL
Match: Q00LP1_SOLLC (GRAS9 (Fragment) OS=Solanum lycopersicum GN=GRAS9 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.755e-21
Identity = 51/78 (65.38%), Postives = 61/78 (78.21%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPGSR----VTVNEENGGVCFGWMGRTLTVASAW 222
            VA EGRDR+ERCEVFGKWRARMSMAGF   P+SQ++ +S+  RL  G R      VNE++GG+ FGWMG+TLTVASAW
Sbjct:  418 VACEGRDRLERCEVFGKWRARMSMAGFGPRPMSQQIADSLLKRLNSGPRGNPGFNVNEQSGGIRFGWMGKTLTVASAW 495

[Close]

BLAST of GT619373 vs. TrEMBL
Match: D7MWU2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_497317 PE=4 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.755e-21
Identity = 49/75 (65.33%), Postives = 56/75 (74.67%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPGSRVTVNEENGGVCFGWMGRTLTVASAWR 225
            VA EG DR+ERCEVFGKWR RMSMAGF L P+S+K+ + +          TV E+NGGVCFGWMGRTL VASAWR
Sbjct:  497 VACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEKIADRLNNGNLAHPGFTVKEDNGGVCFGWMGRTLAVASAWR 571

[Close]

BLAST of GT619373 vs. TrEMBL
Match: D7MS57_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495319 PE=4 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.755e-21
Identity = 49/75 (65.33%), Postives = 56/75 (74.67%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPGSRVTVNEENGGVCFGWMGRTLTVASAWR 225
            VA EG DR+ERCEVFGKWR RMSMAGF L P+S+K+ + +          TV E+NGGVCFGWMGRTL VASAWR
Sbjct:  576 VACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEKIADRLNNGNLAHPGFTVKEDNGGVCFGWMGRTLAVASAWR 650

[Close]

BLAST of GT619373 vs. TrEMBL
Match: B8ZX63_ANTMA (Scarecrow-like transcription factor SCL8-L protein OS=Antirrhinum majus GN=scl8-L PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.486e-20
Identity = 51/79 (64.56%), Postives = 62/79 (78.48%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPGSR----VTVNEENGGVCFGWMGRTLTVASAWR 225
            VA EG++RVERCEVFGKWRARM MAGF  +P+SQ V ES++++L  G+R      V+E +GGV FGWMGRTL VASAWR
Sbjct:  519 VACEGKERVERCEVFGKWRARMGMAGFVASPLSQLVAESLRSKLNSGTRGNPGFGVSEMSGGVGFGWMGRTLXVASAWR 597

[Close]

BLAST of GT619373 vs. TrEMBL
Match: B6SWF9_MAIZE (Chitin-inducible gibberellin-responsive protein 2 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.220e-16
Identity = 44/77 (57.14%), Postives = 52/77 (67.53%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPGSR--VTVNEENGGVCFGWMGRTLTVASAWR 225
            VA EG DRVERCEVFGKWRAR  MAG R   + Q V + +K RL P +R    V  ++G +  GWMGR +TVASAWR
Sbjct:  531 VAREGPDRVERCEVFGKWRARFGMAGLRPVAIGQGVADRVKGRLGPAARPGFDVKLDSGRLAIGWMGRVVTVASAWR 607

[Close]

BLAST of GT619373 vs. SwissProt
Match: SCL8_ARATH (Scarecrow-like protein 8 OS=Arabidopsis thaliana GN=SCL8 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.431e-25
Identity = 56/79 (70.89%), Postives = 64/79 (81.01%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPGSRV----TVNEENGGVCFGWMGRTLTVASAWR 225
            VA EG DR+ERCEVFGKWR RMSMAGF L P+S+K+ ES+K+R   G+RV    TV E+NGGVCFGWMGR LTVASAWR
Sbjct:  565 VACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEKIAESMKSR---GNRVHPGFTVKEDNGGVCFGWMGRALTVASAWR 640

[Close]

BLAST of GT619373 vs. SwissProt
Match: CIGR1_ORYSJ (Chitin-inducible gibberellin-responsive protein 1 OS=Oryza sativa subsp. japonica GN=CIGR1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.479e-12
Identity = 36/75 (48.00%), Postives = 51/75 (68.00%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPGS-RVTVNEENGGVCFGWMGRTLTVASAW 222
            +A EG+DRVER E+ GKW++R++MAGFR  P+S  V   I+  LA  S + T++E++G +  GW  R L  ASAW
Sbjct:  496 IACEGKDRVERHELLGKWKSRLTMAGFRPYPLSSYVNSVIRKLLACYSDKYTLDEKDGAMLLGWRSRKLISASAW 570

[Close]

BLAST of GT619373 vs. SwissProt
Match: CIGR2_ORYSJ (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica GN=CIGR2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.635e-11
Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPGS-RVTVNEENGGVCFGWMGRTLTVASAW 222
            +A EG +R ER E FGKW+AR++MAGFR +P+S  V  +I+  L   S    + E +G +  GW  R L V+SAW
Sbjct:  469 IACEGEERAERYEPFGKWKARLTMAGFRPSPLSSLVNATIRTLLQSYSDNYKLAERDGALYLGWKSRPLVVSSAW 543

[Close]

BLAST of GT619373 vs. SwissProt
Match: SCL1_ARATH (Scarecrow-like protein 1 OS=Arabidopsis thaliana GN=SCL1 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.756e-11
Identity = 36/77 (46.75%), Postives = 48/77 (62.34%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPG--SRVTVNEENGGVCFGWMGRTLTVASAWR 225
            VA EG +R+ER E  GKWRARM MAGF   P+S KV  +I+  +     ++  + EE G + F W  ++L VASAWR
Sbjct:  517 VACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCWEEKSLIVASAWR 593

[Close]

BLAST of GT619373 vs. SwissProt
Match: PAT1_ARATH (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.212e-11
Identity = 34/76 (44.74%), Postives = 46/76 (60.53%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPGS-RVTVNEENGGVCFGWMGRTLTVASAWR 225
            +A EG DRVER E+ GKWR+R  MAGF   P+S  V  +IK+ L   S +  + E +G +  GWM R L  + AW+
Sbjct:  415 IACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLEERDGALYLGWMHRDLVASCAWK 490

[Close]

BLAST of GT619373 vs. SwissProt
Match: SCL21_ARATH (Scarecrow-like protein 21 OS=Arabidopsis thaliana GN=SCL21 PE=1 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 1.807e-10
Identity = 31/76 (40.79%), Postives = 46/76 (60.53%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPGSR-VTVNEENGGVCFGWMGRTLTVASAWR 225
            +A EG +R+ER E+ GKW++R SMAGF   P+S  +  +I+A L   S    + E +G +  GWM R L  + AW+
Sbjct:  338 IACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIEERDGALYLGWMDRILVSSCAWK 413

[Close]

BLAST of GT619373 vs. SwissProt
Match: SCL5_ARATH (Scarecrow-like protein 5 OS=Arabidopsis thaliana GN=SCL5 PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 1.998e-9
Identity = 32/76 (42.11%), Postives = 44/76 (57.89%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPGS-RVTVNEENGGVCFGWMGRTLTVASAWR 225
            +A EG +R ER E  GKWR+R  MAGF+  P+S  V  +IK  L   S + T+ E +G +  GW  + L  + AWR
Sbjct:  522 IACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTLEERDGALYLGWKNQPLITSCAWR 597

[Close]

BLAST of GT619373 vs. SwissProt
Match: SLR1_ORYSJ (DELLA protein SLR1 OS=Oryza sativa subsp. japonica GN=SLR1 PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.432e-7
Identity = 31/78 (39.74%), Postives = 39/78 (50.00%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGF---RLNPVSQKVGESIKARLAPGSRVTVNEENGGVCFGWMGRTLTVASAWR 225
            VA EG +R ER E  G+WR R+  AGF    L   + K   ++ A  A G    V E+ G +  GW  R L   SAWR
Sbjct:  544 VACEGAERTERHETLGQWRNRLGRAGFEPVHLGSNAYKQASTLLALFAGGDGYRVEEKEGCLTLGWHTRPLIATSAWR 621

[Close]

BLAST of GT619373 vs. SwissProt
Match: GAI1_VITVI (DELLA protein GAI1 OS=Vitis vinifera GN=GAI1 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.432e-7
Identity = 32/78 (41.03%), Postives = 39/78 (50.00%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGF---RLNPVSQKVGESIKARLAPGSRVTVNEENGGVCFGWMGRTLTVASAWR 225
            VA EG +RVER E   +WRAR+  AGF    L   + K    + A  A G    V E NG +  GW  R L   SAW+
Sbjct:  498 VACEGPERVERHETLAQWRARLGSAGFDPVNLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWQ 575

[Close]

BLAST of GT619373 vs. SwissProt
Match: SLN1_HORVU (DELLA protein SLN1 OS=Hordeum vulgare GN=SLN1 PE=1 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.870e-7
Identity = 31/78 (39.74%), Postives = 39/78 (50.00%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGF---RLNPVSQKVGESIKARLAPGSRVTVNEENGGVCFGWMGRTLTVASAWR 225
            VA EG +R ER E  G+WR R+  AGF    L   + K   ++ A  A G    V E+ G +  GW  R L   SAWR
Sbjct:  537 VACEGTERTERHETLGQWRNRLGNAGFETVHLGSNAYKQASTLLALFAGGDGYKVEEKEGCLTLGWHTRPLIATSAWR 614

[Close]

BLAST of GT619373 vs. TAIR peptide
Match: AT5G52510.1 (| Symbols: SCL8 | SCARECROW-like 8 | chr5:21307196-21309118 FORWARD LENGTH=640)

HSP 1 Score: 113.235 bits (282), Expect = 5.429e-26
Identity = 56/79 (70.89%), Postives = 64/79 (81.01%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPGSRV----TVNEENGGVCFGWMGRTLTVASAWR 225
            VA EG DR+ERCEVFGKWR RMSMAGF L P+S+K+ ES+K+R   G+RV    TV E+NGGVCFGWMGR LTVASAWR
Sbjct:  565 VACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEKIAESMKSR---GNRVHPGFTVKEDNGGVCFGWMGRALTVASAWR 640

[Close]

BLAST of GT619373 vs. TAIR peptide
Match: AT1G21450.1 (| Symbols: SCL1 | SCARECROW-like 1 | chr1:7509721-7511502 FORWARD LENGTH=593)

HSP 1 Score: 66.6254 bits (161), Expect = 5.827e-12
Identity = 36/77 (46.75%), Postives = 48/77 (62.34%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPG--SRVTVNEENGGVCFGWMGRTLTVASAWR 225
            VA EG +R+ER E  GKWRARM MAGF   P+S KV  +I+  +     ++  + EE G + F W  ++L VASAWR
Sbjct:  517 VACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCWEEKSLIVASAWR 593

[Close]

BLAST of GT619373 vs. TAIR peptide
Match: AT5G48150.2 (| Symbols: PAT1 | GRAS family transcription factor | chr5:19522497-19524053 REVERSE LENGTH=490)

HSP 1 Score: 66.2402 bits (160), Expect = 7.610e-12
Identity = 34/76 (44.74%), Postives = 46/76 (60.53%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPGS-RVTVNEENGGVCFGWMGRTLTVASAWR 225
            +A EG DRVER E+ GKWR+R  MAGF   P+S  V  +IK+ L   S +  + E +G +  GWM R L  + AW+
Sbjct:  415 IACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLEERDGALYLGWMHRDLVASCAWK 490

[Close]

BLAST of GT619373 vs. TAIR peptide
Match: AT5G48150.1 (| Symbols: PAT1 | GRAS family transcription factor | chr5:19522497-19524053 REVERSE LENGTH=490)

HSP 1 Score: 66.2402 bits (160), Expect = 7.610e-12
Identity = 34/76 (44.74%), Postives = 46/76 (60.53%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPGS-RVTVNEENGGVCFGWMGRTLTVASAWR 225
            +A EG DRVER E+ GKWR+R  MAGF   P+S  V  +IK+ L   S +  + E +G +  GWM R L  + AW+
Sbjct:  415 IACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLEERDGALYLGWMHRDLVASCAWK 490

[Close]

BLAST of GT619373 vs. TAIR peptide
Match: AT2G04890.1 (| Symbols: SCL21 | SCARECROW-like 21 | chr2:1720575-1721816 REVERSE LENGTH=413)

HSP 1 Score: 64.6994 bits (156), Expect = 2.214e-11
Identity = 31/76 (40.79%), Postives = 46/76 (60.53%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPGSR-VTVNEENGGVCFGWMGRTLTVASAWR 225
            +A EG +R+ER E+ GKW++R SMAGF   P+S  +  +I+A L   S    + E +G +  GWM R L  + AW+
Sbjct:  338 IACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIEERDGALYLGWMDRILVSSCAWK 413

[Close]

BLAST of GT619373 vs. TAIR peptide
Match: AT1G50600.1 (| Symbols: SCL5 | scarecrow-like 5 | chr1:18737398-18739547 REVERSE LENGTH=597)

HSP 1 Score: 61.2326 bits (147), Expect = 2.448e-10
Identity = 32/76 (42.11%), Postives = 44/76 (57.89%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPGS-RVTVNEENGGVCFGWMGRTLTVASAWR 225
            +A EG +R ER E  GKWR+R  MAGF+  P+S  V  +IK  L   S + T+ E +G +  GW  + L  + AWR
Sbjct:  522 IACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTLEERDGALYLGWKNQPLITSCAWR 597

[Close]

BLAST of GT619373 vs. TAIR peptide
Match: AT1G07530.1 (| Symbols: SCL14, ATGRAS2, GRAS2 | SCARECROW-like 14 | chr1:2313828-2316137 REVERSE LENGTH=769)

HSP 1 Score: 53.9138 bits (128), Expect = 3.909e-8
Identity = 26/76 (34.21%), Postives = 45/76 (59.21%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVSQKVGESIKARLAPG--SRVTVNEENGGVCFGWMGRTLTVASAW 222
            VA EG +RVER E + +W+AR+  AGFR  P+ +++ +++K ++  G      V++    +  GW GR +  +S W
Sbjct:  689 VACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIENGYDKNFDVDQNGNWLLQGWKGRIVYASSLW 764

[Close]

BLAST of GT619373 vs. TAIR peptide
Match: AT3G03450.1 (| Symbols: RGL2 | RGA-like 2 | chr3:819636-821279 REVERSE LENGTH=547)

HSP 1 Score: 53.5286 bits (127), Expect = 5.105e-8
Identity = 31/78 (39.74%), Postives = 38/78 (48.72%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGF---RLNPVSQKVGESIKARLAPGSRVTVNEENGGVCFGWMGRTLTVASAWR 225
            VA EG DRVER E   +WR RM  AGF    L   + K    + +  A G    V E +G +  GW  R L   SAW+
Sbjct:  468 VAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEENDGCLMIGWQTRPLITTSAWK 545

[Close]

BLAST of GT619373 vs. TAIR peptide
Match: AT1G66350.1 (| Symbols: RGL1, RGL | RGA-like 1 | chr1:24748327-24749862 FORWARD LENGTH=511)

HSP 1 Score: 52.7582 bits (125), Expect = 8.707e-8
Identity = 32/80 (40.00%), Postives = 37/80 (46.25%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGFRLNPVS-----QKVGESIKARLAPGSRVTVNEENGGVCFGWMGRTLTVASAWR 225
            VA EG DRVER E   +WR R  + GF+  PVS      K    + A  A      V E  G +  GW  R L   SAWR
Sbjct:  429 VACEGEDRVERHETLNQWRNRFGLGGFK--PVSIGSNAYKQASMLLALYAGADGYNVEENEGCLLLGWQTRPLIATSAWR 506

[Close]

BLAST of GT619373 vs. TAIR peptide
Match: AT5G17490.1 (| Symbols: RGL3 | RGA-like protein 3 | chr5:5764316-5765887 REVERSE LENGTH=523)

HSP 1 Score: 51.6026 bits (122), Expect = 1.940e-7
Identity = 29/78 (37.18%), Postives = 37/78 (47.44%), Query Frame = 1

Query:    1 VAWEGRDRVERCEVFGKWRARMSMAGF---RLNPVSQKVGESIKARLAPGSRVTVNEENGGVCFGWMGRTLTVASAWR 225
            VA EG DR+ER E   +WR RM  AGF    L   + K    + A    G    V E +G +   W  + L  ASAW+
Sbjct:  439 VATEGSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEENDGSLMLAWQTKPLIAASAWK 516

The following BLAST results are available for this feature:

BLAST of GT619373 vs. TrEMBL
BLAST of GT619373 vs. SwissProt
BLAST of GT619373 vs. TAIR peptide

BLAST of GT619373 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9RIU5_RICCO	4.313e-28	77.22	DELLA protein GAI, putative OS=Ricinus communis GN...	[more]
B9MWZ8_POPTR	8.994e-26	74.68	GRAS family transcription factor OS=Populus tricho...	[more]
B9H3H7_POPTR	1.534e-25	72.15	GRAS family transcription factor OS=Populus tricho...	[more]
A9PF09_POPTR	1.534e-25	72.15	Putative uncharacterized protein OS=Populus tricho...	[more]
Q00LP0_SOLLC	4.464e-25	72.15	GRAS10 OS=Solanum lycopersicum GN=GRAS10 PE=2 SV=1	[more]
Q00LP1_SOLLC	1.755e-21	65.38	GRAS9 (Fragment) OS=Solanum lycopersicum GN=GRAS9 ...	[more]
D7MWU2_ARALY	1.755e-21	65.33	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
D7MS57_ARALY	1.755e-21	65.33	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
B8ZX63_ANTMA	1.486e-20	64.56	Scarecrow-like transcription factor SCL8-L protein...	[more]
B6SWF9_MAIZE	2.220e-16	57.14	Chitin-inducible gibberellin-responsive protein 2 ...	[more]

BLAST of GT619373 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
SCL8_ARATH	4.431e-25	70.89	Scarecrow-like protein 8 OS=Arabidopsis thaliana G...	[more]
CIGR1_ORYSJ	1.479e-12	48.00	Chitin-inducible gibberellin-responsive protein 1 ...	[more]
CIGR2_ORYSJ	1.635e-11	45.33	Chitin-inducible gibberellin-responsive protein 2 ...	[more]
SCL1_ARATH	4.756e-11	46.75	Scarecrow-like protein 1 OS=Arabidopsis thaliana G...	[more]
PAT1_ARATH	6.212e-11	44.74	Scarecrow-like transcription factor PAT1 OS=Arabid...	[more]
SCL21_ARATH	1.807e-10	40.79	Scarecrow-like protein 21 OS=Arabidopsis thaliana ...	[more]
SCL5_ARATH	1.998e-9	42.11	Scarecrow-like protein 5 OS=Arabidopsis thaliana G...	[more]
SLR1_ORYSJ	1.432e-7	39.74	DELLA protein SLR1 OS=Oryza sativa subsp. japonica...	[more]
GAI1_VITVI	1.432e-7	41.03	DELLA protein GAI1 OS=Vitis vinifera GN=GAI1 PE=2 ...	[more]
SLN1_HORVU	1.870e-7	39.74	DELLA protein SLN1 OS=Hordeum vulgare GN=SLN1 PE=1...	[more]

BLAST of GT619373 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT5G52510.1	5.429e-26	70.89	\| Symbols: SCL8 \| SCARECROW-like 8 \| chr5:21307196...	[more]
AT1G21450.1	5.827e-12	46.75	\| Symbols: SCL1 \| SCARECROW-like 1 \| chr1:7509721-...	[more]
AT5G48150.2	7.610e-12	44.74	\| Symbols: PAT1 \| GRAS family transcription factor...	[more]
AT5G48150.1	7.610e-12	44.74	\| Symbols: PAT1 \| GRAS family transcription factor...	[more]
AT2G04890.1	2.214e-11	40.79	\| Symbols: SCL21 \| SCARECROW-like 21 \| chr2:172057...	[more]
AT1G50600.1	2.448e-10	42.11	\| Symbols: SCL5 \| scarecrow-like 5 \| chr1:18737398...	[more]
AT1G07530.1	3.909e-8	34.21	\| Symbols: SCL14, ATGRAS2, GRAS2 \| SCARECROW-like ...	[more]
AT3G03450.1	5.105e-8	39.74	\| Symbols: RGL2 \| RGA-like 2 \| chr3:819636-821279 ...	[more]
AT1G66350.1	8.707e-8	40.00	\| Symbols: RGL1, RGL \| RGA-like 1 \| chr1:24748327-...	[more]
AT5G17490.1	1.940e-7	37.18	\| Symbols: RGL3 \| RGA-like protein 3 \| chr5:576431...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 1..75 score: 8.3
IPR005202	Transcription factor GRAS	PROFILE	PS50985	GRAS	coord: 1..57 score: 10

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT619373 ID=GT619373; Name=GT619373; organism=Lens culinaris; type=EST; length=433bp
GTTGCTTGGGAAGGTAGGGATCGTGTGGAGCGTTGTGAAGTGTTTGGGAA
GTGGCGTGCACGGATGAGTATGGCTGGGTTTAGGTTGAACCCGGTGAGTC
AGAAAGTGGGTGAGTCAATAAAAGCGCGACTCGCACCGGGTAGCCGAGTT
ACTGTGAATGAAGAAAACGGTGGGGTTTGTTTTGGGTGGATGGGAAGAAC
ACTAACCGTCGCATCTGCTTGGCGTTAACTCCACTCACTCTTTTTATTTT
TTAATTTGTAATTGGTATGAATATTATTATAAGTCACATTGTTACGGGTA
TATTTCAACTTTATCTAGAGATTATGGATAGTAATAAAAAGATAAAAAAA
TGAAAAATAGTGTTGGGAAATTGTACTTGAACACACTTGGTTCTTCTGTT
TTGTTCCACCTAATAAAAAAAGTGTTTGAATTT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR005202	TF_GRAS

Search form