GT618767

EST Overview
NameGT618767
Unique NameGT618767
TypeEST
OrganismLens culinaris (lentil)
Sequence length629
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
Homology
[Close]
BLAST of GT618767 vs. TrEMBL
Match: Q9SAL0_ARATH (At1g79380/T8K14_20 OS=Arabidopsis thaliana GN=At1g79380 PE=2 SV=1)

HSP 1 Score: 46.9802 bits (110), Expect = 1.728e-8
Identity = 24/43 (55.81%), Postives = 32/43 (74.42%), Query Frame = -3 
Query:  364 IANNMKFSRGSTLYAMVDEAATDTVEKIHGQFHVLIIVADGRI 492
            IA N++ S G T Y  + +AA D VEK +GQFHVL+IVADG++
Sbjct:  171 IAPNLRLS-GPTSYGPLIDAAVDIVEKNNGQFHVLVIVADGQV 212

HSP 2 Score: 36.1946 bits (82), Expect = 1.728e-8
Identity = 14/22 (63.64%), Postives = 18/22 (81.82%), Query Frame = -1 
Query:  306 AGSYPLSIILICVGEGPWRDMK 371
            A SY LSI+L+ VG+GPW DM+
Sbjct:  237 ASSYALSIVLVGVGDGPWEDMR 258
[Close]
BLAST of GT618767 vs. TrEMBL
Match: D7KWH3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_477103 PE=4 SV=1)

HSP 1 Score: 46.9802 bits (110), Expect = 1.728e-8
Identity = 24/43 (55.81%), Postives = 32/43 (74.42%), Query Frame = -3 
Query:  364 IANNMKFSRGSTLYAMVDEAATDTVEKIHGQFHVLIIVADGRI 492
            IA N++ S G T Y  + +AA D VEK +GQFHVL+IVADG++
Sbjct:  174 IAPNLRLS-GPTSYGPLIDAAVDIVEKNNGQFHVLVIVADGQV 215

HSP 2 Score: 36.1946 bits (82), Expect = 1.728e-8
Identity = 14/22 (63.64%), Postives = 18/22 (81.82%), Query Frame = -1 
Query:  306 AGSYPLSIILICVGEGPWRDMK 371
            A SY LSI+L+ VG+GPW DM+
Sbjct:  240 ASSYALSIVLVGVGDGPWEDMR 261
[Close]
BLAST of GT618767 vs. TrEMBL
Match: A5BTC3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024760 PE=4 SV=1)

HSP 1 Score: 42.3578 bits (98), Expect = 8.462e-7
Identity = 23/49 (46.94%), Postives = 33/49 (67.35%), Query Frame = -3 
Query:  352 NVIANNMKFSRGSTLYAMVDEAATDTVEKIHGQFHVLIIVADGRIVPSL 498
            NV AN +    G T +A + +AA D VE  +GQ+HVL+I+ADG++  SL
Sbjct:  228 NVDANIL----GPTSFAPIIDAAIDIVEGSNGQYHVLVIIADGQVSGSL 272

HSP 2 Score: 35.039 bits (79), Expect = 8.462e-7
Identity = 15/22 (68.18%), Postives = 17/22 (77.27%), Query Frame = -1 
Query:  306 AGSYPLSIILICVGEGPWRDMK 371
            A  YPLSIIL+ VG+GPW  MK
Sbjct:  293 ASRYPLSIILVGVGDGPWDAMK 314
[Close]
BLAST of GT618767 vs. TAIR peptide
Match: AT1G79380.1 (| Symbols: | Ca(2)-dependent phospholipid-binding protein (Copine) family | chr1:29860812-29863023 FORWARD LENGTH=401)

HSP 1 Score: 46.9802 bits (110), Expect = 1.233e-10
Identity = 24/43 (55.81%), Postives = 32/43 (74.42%), Query Frame = -3 
Query:  364 IANNMKFSRGSTLYAMVDEAATDTVEKIHGQFHVLIIVADGRI 492
            IA N++ S G T Y  + +AA D VEK +GQFHVL+IVADG++
Sbjct:  171 IAPNLRLS-GPTSYGPLIDAAVDIVEKNNGQFHVLVIVADGQV 212

HSP 2 Score: 36.1946 bits (82), Expect = 1.233e-10
Identity = 14/22 (63.64%), Postives = 18/22 (81.82%), Query Frame = -1 
Query:  306 AGSYPLSIILICVGEGPWRDMK 371
            A SY LSI+L+ VG+GPW DM+
Sbjct:  237 ASSYALSIVLVGVGDGPWEDMR 258
[Close]
BLAST of GT618767 vs. TAIR peptide
Match: AT5G63970.2 (| Symbols: | Copine (Calcium-dependent phospholipid-binding protein) family | chr5:25607006-25608916 REVERSE LENGTH=367)

HSP 1 Score: 36.965 bits (84), Expect = 1.763e-7
Identity = 19/43 (44.19%), Postives = 31/43 (72.09%), Query Frame = -3 
Query:  364 IANNMKFSRGSTLYAMVDEAATDTVEKIHGQFHVLIIVADGRI 492
            I  ++K S G T +A V +AA + VE+ + Q+HVL+I+ADG++
Sbjct:  129 IVPHLKLS-GPTSFAPVIDAAINIVEQNNMQYHVLVIIADGQV 170

HSP 2 Score: 35.4242 bits (80), Expect = 1.763e-7
Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = -1 
Query:  306 LQMAGSYPLSIILICVGEGPWRDMK 380
            +  A  YPLSI+L+ VG+GPW  MK
Sbjct:  192 IMAASHYPLSIVLVGVGDGPWDTMK 216
[Close]
BLAST of GT618767 vs. TAIR peptide
Match: AT5G63970.1 (| Symbols: | Copine (Calcium-dependent phospholipid-binding protein) family | chr5:25607006-25608916 REVERSE LENGTH=367)

HSP 1 Score: 36.965 bits (84), Expect = 1.763e-7
Identity = 19/43 (44.19%), Postives = 31/43 (72.09%), Query Frame = -3 
Query:  364 IANNMKFSRGSTLYAMVDEAATDTVEKIHGQFHVLIIVADGRI 492
            I  ++K S G T +A V +AA + VE+ + Q+HVL+I+ADG++
Sbjct:  129 IVPHLKLS-GPTSFAPVIDAAINIVEQNNMQYHVLVIIADGQV 170

HSP 2 Score: 35.4242 bits (80), Expect = 1.763e-7
Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = -1 
Query:  306 LQMAGSYPLSIILICVGEGPWRDMK 380
            +  A  YPLSI+L+ VG+GPW  MK
Sbjct:  192 IMAASHYPLSIVLVGVGDGPWDTMK 216
[Close]
BLAST of GT618767 vs. TAIR peptide
Match: AT1G67800.2 (| Symbols: | Copine (Calcium-dependent phospholipid-binding protein) family | chr1:25421029-25423297 REVERSE LENGTH=453)

HSP 1 Score: 37.7354 bits (86), Expect = 2.262e-7
Identity = 17/38 (44.74%), Postives = 26/38 (68.42%), Query Frame = -3 
Query:  352 GSTLYAMVDEAATDTVEKIHGQFHVLIIVADGRIVPSL 465
            G T +A + E A   VE+  GQ+HVL+I+ADG++  S+
Sbjct:  213 GPTSFAPIIERAMTIVEESGGQYHVLLIIADGQVTRSV 250

HSP 2 Score: 34.2686 bits (77), Expect = 2.262e-7
Identity = 13/22 (59.09%), Postives = 17/22 (77.27%), Query Frame = -1 
Query:  306 AGSYPLSIILICVGEGPWRDMK 371
            A  YPLSI+L+ VG+GPW  M+
Sbjct:  271 ASEYPLSIVLVGVGDGPWDTMR 292
[Close]
BLAST of GT618767 vs. TAIR peptide
Match: AT1G67800.4 (| Symbols: | Copine (Calcium-dependent phospholipid-binding protein) family | chr1:25421029-25423237 REVERSE LENGTH=433)

HSP 1 Score: 37.7354 bits (86), Expect = 2.267e-7
Identity = 17/38 (44.74%), Postives = 26/38 (68.42%), Query Frame = -3 
Query:  352 GSTLYAMVDEAATDTVEKIHGQFHVLIIVADGRIVPSL 465
            G T +A + E A   VE+  GQ+HVL+I+ADG++  S+
Sbjct:  193 GPTSFAPIIERAMTIVEESGGQYHVLLIIADGQVTRSV 230

HSP 2 Score: 34.2686 bits (77), Expect = 2.267e-7
Identity = 13/22 (59.09%), Postives = 17/22 (77.27%), Query Frame = -1 
Query:  306 AGSYPLSIILICVGEGPWRDMK 371
            A  YPLSI+L+ VG+GPW  M+
Sbjct:  251 ASEYPLSIVLVGVGDGPWDTMR 272
[Close]
BLAST of GT618767 vs. TAIR peptide
Match: AT1G67800.3 (| Symbols: | Copine (Calcium-dependent phospholipid-binding protein) family | chr1:25421029-25423237 REVERSE LENGTH=433)

HSP 1 Score: 37.7354 bits (86), Expect = 2.267e-7
Identity = 17/38 (44.74%), Postives = 26/38 (68.42%), Query Frame = -3 
Query:  352 GSTLYAMVDEAATDTVEKIHGQFHVLIIVADGRIVPSL 465
            G T +A + E A   VE+  GQ+HVL+I+ADG++  S+
Sbjct:  193 GPTSFAPIIERAMTIVEESGGQYHVLLIIADGQVTRSV 230

HSP 2 Score: 34.2686 bits (77), Expect = 2.267e-7
Identity = 13/22 (59.09%), Postives = 17/22 (77.27%), Query Frame = -1 
Query:  306 AGSYPLSIILICVGEGPWRDMK 371
            A  YPLSI+L+ VG+GPW  M+
Sbjct:  251 ASEYPLSIVLVGVGDGPWDTMR 272
[Close]
BLAST of GT618767 vs. TAIR peptide
Match: AT1G67800.1 (| Symbols: | Copine (Calcium-dependent phospholipid-binding protein) family | chr1:25421029-25423237 REVERSE LENGTH=433)

HSP 1 Score: 37.7354 bits (86), Expect = 2.267e-7
Identity = 17/38 (44.74%), Postives = 26/38 (68.42%), Query Frame = -3 
Query:  352 GSTLYAMVDEAATDTVEKIHGQFHVLIIVADGRIVPSL 465
            G T +A + E A   VE+  GQ+HVL+I+ADG++  S+
Sbjct:  193 GPTSFAPIIERAMTIVEESGGQYHVLLIIADGQVTRSV 230

HSP 2 Score: 34.2686 bits (77), Expect = 2.267e-7
Identity = 13/22 (59.09%), Postives = 17/22 (77.27%), Query Frame = -1 
Query:  306 AGSYPLSIILICVGEGPWRDMK 371
            A  YPLSI+L+ VG+GPW  M+
Sbjct:  251 ASEYPLSIVLVGVGDGPWDTMR 272
The following BLAST results are available for this feature:
BLAST of GT618767 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
Q9SAL0_ARATH1.728e-855.81At1g79380/T8K14_20 OS=Arabidopsis thaliana GN=At1g... [more]
D7KWH3_ARALY1.728e-855.81Putative uncharacterized protein OS=Arabidopsis ly... [more]
A5BTC3_VITVI8.462e-746.94Putative uncharacterized protein OS=Vitis vinifera... [more]
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BLAST of GT618767 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 7
Match NameE-valueIdentityDescription
AT1G79380.11.233e-1055.81| Symbols: | Ca(2)-dependent phospholipid-binding... [more]
AT5G63970.21.763e-744.19| Symbols: | Copine (Calcium-dependent phospholip... [more]
AT5G63970.11.763e-744.19| Symbols: | Copine (Calcium-dependent phospholip... [more]
AT1G67800.22.262e-744.74| Symbols: | Copine (Calcium-dependent phospholip... [more]
AT1G67800.42.267e-744.74| Symbols: | Copine (Calcium-dependent phospholip... [more]
AT1G67800.32.267e-744.74| Symbols: | Copine (Calcium-dependent phospholip... [more]
AT1G67800.12.267e-744.74| Symbols: | Copine (Calcium-dependent phospholip... [more]
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Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT618767 ID=GT618767; Name=GT618767; organism=Lens culinaris; type=EST; length=629bp
CGAAAAACGCTAACCCCCTACCTTATGTTGTCTGACACAGGTTGAATCTT
GGACGAGATGGTGAAGCCTCCTTTCGCAAACCGGGATCCGTTCAGCTTTC
GTCCGTGTGTTGAAGGTCAACCGACAACCTCGAAAGCAGCCGGTTCATCA
CTGAGGAGCACTGCGCTTTCTATAGCTTGAATTTTGTTCTTAGGACTGGT
GCCTACTTTCAAATGCTCGAGATGTGGAGAAGTATAATCATACTGCTGAA
ATCTCAGAGTAACTTTGAGATATTTCAGTTCTAGCGAGTAACTTGTCATC
AAACCTTTCATATCTCTCCAAGGCCCTTCACCAACGCAAATCAGAATAAT
AGAGAGAGGGTACGATCCGGCCATCTGCAACAATAATTAACACGTGAAAT
TGGCCATGAATCTTCTCAACCGTGTCTGTTGCAGCCTCATCCACCATAGC
GTACAATGTTGACCCTCGGGAAAATTTCATATTATTTGCAATTACATTCT
TTGTAGTTTTTCTTTGATGAATTTTTTTTCACTTTTGTATTTTCTATAAG
TTCATTGACATTGGAACAAAATTTTCATAGCAAGCCAAAACTTATTCCAA
TCTGAATTATCAGCTACATACTGTATTTG
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