GT619144

EST Overview
NameGT619144
Unique NameGT619144
TypeEST
OrganismLens culinaris (lentil)
Sequence length705
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT619144 vs. TrEMBL
Match: B9S1Z6_RICCO (Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase, putative OS=Ricinus communis GN=RCOM_1324470 PE=4 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.997e-63
Identity = 120/172 (69.77%), Postives = 139/172 (80.81%), Query Frame = -3
Query:  188 EKYTLCQDGMYHKQDQFGRRLPTFIQLINFTEQEESEYWAVVSAVFEGKQVDSITSQSKVDVIPSTSVDASINNKVHLLRTMLSWEEQLRSEVSISQAKHDAKFDDPRGPLNLGEVVIICWPHGEIMRLKAGSSAVDAAQRTGLEGKLVLINGHLVLPNTKLKDGDVLEVRI 703
            EKYTLC+DGMYHKQDQF R LPTFIQ+I+ TEQEESEYWAVVSAVFEGK VDS+ S+  +D   S  +DA INNKV LLRTML WEEQLR+E S+ Q K+D K       + L EVVIICWPHGEIMRL+ GS+A DAA+R GLEGKLVL+NG LVLP+T+L DGDV+EVR+
Sbjct:  635 EKYTLCRDGMYHKQDQFERLLPTFIQVIDLTEQEESEYWAVVSAVFEGKPVDSVASRPNLDSAASNPIDAGINNKVRLLRTMLRWEEQLRTEASLGQPKYDMKSHYTADSIILSEVVIICWPHGEIMRLRTGSTAADAARRVGLEGKLVLVNGQLVLPSTELSDGDVVEVRV 806          
BLAST of GT619144 vs. TrEMBL
Match: D7T7R8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_39.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024422001 PE=4 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 4.163e-61
Identity = 122/182 (67.03%), Postives = 141/182 (77.47%), Query Frame = -3
Query:  188 EKYTLCQDGMYHKQDQFGRRLPTFIQLINFTEQEESEYWAVVSAVFEGKQVDSITSQSKVDV--------IPSTSVDASINNKVHLLRTMLSWEEQLRSEVSISQAKHDAKFDDPRGPLN--LGEVVIICWPHGEIMRLKAGSSAVDAAQRTGLEGKLVLINGHLVLPNTKLKDGDVLEVRI 703
            EKYTLC+DGMYHK+DQF R LPTFIQ+I+ TEQEESEYWAVVSA+FEGKQ+ SI S S            I STS++A+INNKVHLLRTML WEEQLRSE  + Q K     D    P +  LGEVVI+CWPHGEIMRL+ GS+A DAAQR GL+GKLVL+NG  VLPNT+LKDGDV+EVR+
Sbjct:  687 EKYTLCRDGMYHKEDQFQRLLPTFIQVIDLTEQEESEYWAVVSAIFEGKQIASIESHSNSSFYKRPSSNPISSTSLEANINNKVHLLRTMLQWEEQLRSEAGMRQTKTKVGADPYSTPKSVVLGEVVIVCWPHGEIMRLRTGSTAADAAQRVGLDGKLVLVNGQYVLPNTQLKDGDVVEVRM 868          
BLAST of GT619144 vs. TrEMBL
Match: A5BV44_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020261 PE=4 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 4.163e-61
Identity = 122/182 (67.03%), Postives = 141/182 (77.47%), Query Frame = -3
Query:  188 EKYTLCQDGMYHKQDQFGRRLPTFIQLINFTEQEESEYWAVVSAVFEGKQVDSITSQSKVDV--------IPSTSVDASINNKVHLLRTMLSWEEQLRSEVSISQAKHDAKFDDPRGPLN--LGEVVIICWPHGEIMRLKAGSSAVDAAQRTGLEGKLVLINGHLVLPNTKLKDGDVLEVRI 703
            EKYTLC+DGMYHK+DQF R LPTFIQ+I+ TEQEESEYWAVVSA+FEGKQ+ SI S S            I STS++A+INNKVHLLRTML WEEQLRSE  + Q K     D    P +  LGEVVI+CWPHGEIMRL+ GS+A DAAQR GL+GKLVL+NG  VLPNT+LKDGDV+EVR+
Sbjct:  197 EKYTLCRDGMYHKEDQFQRLLPTFIQVIDLTEQEESEYWAVVSAIFEGKQIASIESHSNSSFYKRPSSNPISSTSLEANINNKVHLLRTMLQWEEQLRSEAGMRQTKTKVGADPYSTPKSVVLGEVVIVCWPHGEIMRLRTGSTAADAAQRVGLDGKLVLVNGQYVLPNTQLKDGDVVEVRM 378          
BLAST of GT619144 vs. TrEMBL
Match: B9I8F7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_571689 PE=4 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.873e-53
Identity = 105/160 (65.62%), Postives = 128/160 (80.00%), Query Frame = -3
Query:  188 KQDQFGRRLPTFIQLINFTEQEESEYWAVVSAVFEGKQVDSITSQSKVDVIPSTSVDASINNKVHLLRTMLSWEEQLRSEVSISQAKHDAKFDDPRGPLNLGEVVIICWPHGEIMRLKAGSSAVDAAQRTGLEGKLVLINGHLVLPNTKLKDGDVLEVRI 667
            +QDQF R LPTFIQ+I+  E+EESEY AV+SAVFEGK VDSI S+  +D + STS++ASINNKV LLRTML WEEQLR E  + Q KH+ K         LGEVVI+CWPHGEI+RL++GS+A DAA+R G +GKLVL+NG LVLPNT+LKDGDV+EVR+
Sbjct:    2 QQDQFERLLPTFIQVIDLMEEEESEYRAVLSAVFEGKPVDSIASRPNIDTVASTSMEASINNKVRLLRTMLQWEEQLRYEAILGQPKHERKSYSSLESGGLGEVVIVCWPHGEIIRLRSGSTAADAARRVGFDGKLVLVNGQLVLPNTELKDGDVVEVRV 161          
BLAST of GT619144 vs. TrEMBL
Match: B8AH77_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08580 PE=4 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.532e-50
Identity = 104/178 (58.43%), Postives = 130/178 (73.03%), Query Frame = -3
Query:  188 EKYTLCQDGMYHKQDQFGRRLPTFIQLINFTEQEESEYWAVVSAVFEGKQVDSI------TSQSKVDVIPSTSVDASINNKVHLLRTMLSWEEQLRSEVSISQAKHDAKFDDPRGPLNLGEVVIICWPHGEIMRLKAGSSAVDAAQRTGLEGKLVLINGHLVLPNTKLKDGDVLEVRI 703
            EKYTLCQDG++HKQDQFGR LPTFIQLI+ TE+EE EYW VVSA+FEGK+  S+      T +S  +   ST +   INNKVHLLRTML WEEQ+R   S+  A+          P+ L EV IICWP+G+IMR+  GS+A DAA+R G+EGKL+ +NG LVLP T+LKDGD++EVR+
Sbjct:  673 EKYTLCQDGIFHKQDQFGRLLPTFIQLIDLTEEEEEEYWMVVSAIFEGKEASSLTPDSSNTERSTSEPPSSTPLSDPINNKVHLLRTMLQWEEQVRRGASL--AEKSLSVGTCTEPI-LREVAIICWPYGKIMRMSLGSTAADAARRMGVEGKLLWVNGQLVLPQTELKDGDIVEVRM 847          
BLAST of GT619144 vs. TrEMBL
Match: Q6Z8E2_ORYSJ (Putative relA/spoT homologous protein RSH2 OS=Oryza sativa subsp. japonica GN=P0459B01.26 PE=4 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 7.366e-50
Identity = 103/178 (57.87%), Postives = 129/178 (72.47%), Query Frame = -3
Query:  188 EKYTLCQDGMYHKQDQFGRRLPTFIQLINFTEQEESEYWAVVSAVFEGKQVDSI------TSQSKVDVIPSTSVDASINNKVHLLRTMLSWEEQLRSEVSISQAKHDAKFDDPRGPLNLGEVVIICWPHGEIMRLKAGSSAVDAAQRTGLEGKLVLINGHLVLPNTKLKDGDVLEVRI 703
            EKYTLCQDG++HKQDQFGR LPTFIQLI+ TE+EE EYW VVSA+FEGK+  S+      T +S  +   ST +   INNKVHLLRTML WEEQ+R   S+   +          P+ L EV IICWP+G+IMR+  GS+A DAA+R G+EGKL+ +NG LVLP T+LKDGD++EVR+
Sbjct:  598 EKYTLCQDGIFHKQDQFGRLLPTFIQLIDLTEEEEEEYWMVVSAIFEGKEASSLTPDSSNTERSTSEPPSSTPLSDPINNKVHLLRTMLQWEEQVRRGASL--VEKSLSVGTCTEPI-LREVAIICWPYGKIMRMSLGSTAADAARRMGVEGKLLWVNGQLVLPQTELKDGDIVEVRM 772          
BLAST of GT619144 vs. TrEMBL
Match: Q0DYE4_ORYSJ (Os02g0699400 protein OS=Oryza sativa subsp. japonica GN=Os02g0699400 PE=4 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 7.366e-50
Identity = 103/178 (57.87%), Postives = 129/178 (72.47%), Query Frame = -3
Query:  188 EKYTLCQDGMYHKQDQFGRRLPTFIQLINFTEQEESEYWAVVSAVFEGKQVDSI------TSQSKVDVIPSTSVDASINNKVHLLRTMLSWEEQLRSEVSISQAKHDAKFDDPRGPLNLGEVVIICWPHGEIMRLKAGSSAVDAAQRTGLEGKLVLINGHLVLPNTKLKDGDVLEVRI 703
            EKYTLCQDG++HKQDQFGR LPTFIQLI+ TE+EE EYW VVSA+FEGK+  S+      T +S  +   ST +   INNKVHLLRTML WEEQ+R   S+   +          P+ L EV IICWP+G+IMR+  GS+A DAA+R G+EGKL+ +NG LVLP T+LKDGD++EVR+
Sbjct:  694 EKYTLCQDGIFHKQDQFGRLLPTFIQLIDLTEEEEEEYWMVVSAIFEGKEASSLTPDSSNTERSTSEPPSSTPLSDPINNKVHLLRTMLQWEEQVRRGASL--VEKSLSVGTCTEPI-LREVAIICWPYGKIMRMSLGSTAADAARRMGVEGKLLWVNGQLVLPQTELKDGDIVEVRM 868          
BLAST of GT619144 vs. TrEMBL
Match: B9F1Y7_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_08040 PE=4 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 7.366e-50
Identity = 103/178 (57.87%), Postives = 129/178 (72.47%), Query Frame = -3
Query:  188 EKYTLCQDGMYHKQDQFGRRLPTFIQLINFTEQEESEYWAVVSAVFEGKQVDSI------TSQSKVDVIPSTSVDASINNKVHLLRTMLSWEEQLRSEVSISQAKHDAKFDDPRGPLNLGEVVIICWPHGEIMRLKAGSSAVDAAQRTGLEGKLVLINGHLVLPNTKLKDGDVLEVRI 703
            EKYTLCQDG++HKQDQFGR LPTFIQLI+ TE+EE EYW VVSA+FEGK+  S+      T +S  +   ST +   INNKVHLLRTML WEEQ+R   S+   +          P+ L EV IICWP+G+IMR+  GS+A DAA+R G+EGKL+ +NG LVLP T+LKDGD++EVR+
Sbjct:  634 EKYTLCQDGIFHKQDQFGRLLPTFIQLIDLTEEEEEEYWMVVSAIFEGKEASSLTPDSSNTERSTSEPPSSTPLSDPINNKVHLLRTMLQWEEQVRRGASL--VEKSLSVGTCTEPI-LREVAIICWPYGKIMRMSLGSTAADAARRMGVEGKLLWVNGQLVLPQTELKDGDIVEVRM 808          
BLAST of GT619144 vs. TrEMBL
Match: C5Y0F0_SORBI (Putative uncharacterized protein Sb04g030900 OS=Sorghum bicolor GN=Sb04g030900 PE=4 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.895e-48
Identity = 99/178 (55.62%), Postives = 130/178 (73.03%), Query Frame = -3
Query:  188 EKYTLCQDGMYHKQDQFGRRLPTFIQLINFTEQEESEYWAVVSAVFEGKQVDSITSQSKV------DVIPSTSVDASINNKVHLLRTMLSWEEQLRSEVSISQAKHDAKFDDPRGPLNLGEVVIICWPHGEIMRLKAGSSAVDAAQRTGLEGKLVLINGHLVLPNTKLKDGDVLEVRI 703
            E+YTLCQDG++HKQDQFGR LPTF+Q+I+ TE+EE EYW VVSA+FEGK+  S+ S+S        +   ST +   INNKVHLLRTML WEEQ+R   S+  A+     +    P+ L EV II WP+G+IMR+  GS+A DAA+R G+EGKL+ +NG +VLP T+LKDGD++EVR+
Sbjct:  704 ERYTLCQDGIFHKQDQFGRLLPTFLQIIDLTEEEEEEYWMVVSAIFEGKETCSLPSESSYADKSSSEPPSSTPLSDPINNKVHLLRTMLQWEEQVRRGASL--AEKSLGVNTCTKPI-LREVAIIFWPNGKIMRMSTGSTAADAARRMGVEGKLLWVNGQVVLPQTELKDGDIVEVRV 878          
BLAST of GT619144 vs. TrEMBL
Match: A9RLB5_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_116207 PE=4 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 5.291e-40
Identity = 85/174 (48.85%), Postives = 117/174 (67.24%), Query Frame = -3
Query:  191 EKYTLCQDGMYHKQDQFGRRLPTFIQLINFTEQEESEYWAVVSAVFEGKQVDSI---TSQSKVDVIPSTSVDASINNKVHLLRTMLSWEEQLRSEVSISQAKHDAKFDDPRGPLNLGEVVIICWPHGEIMRLKAGSSAVDAAQRTGLEGKLVLINGHLVLPNTKLKDGDVLEVR 703
            EKYTLC+DG+YHKQDQF R LPTFIQL++  E E+ +YW V+S V +G++VD      +    D+   TS    +NNKV LLR+ML WE++LR EV+   +      D P     L EV++I WP G+IMR+ AGS+A D A+R G++G++V IN    LP+TKL+DGD++E R
Sbjct:  489 EKYTLCRDGLYHKQDQFDRSLPTFIQLLDLNESEQDDYWKVMSMVEQGEEVDIFVDNAADQHNDLGSGTSTTTRLNNKVKLLRSMLQWEQELRHEVAPDGSVTILNPDHPE-TAALVEVLVISWPDGDIMRMPAGSTAADLARRMGMDGEIVFINHQAALPHTKLRDGDLVETR 661          
The following BLAST results are available for this feature:
BLAST of GT619144 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9S1Z6_RICCO1.997e-6369.77Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohyd... [more]
D7T7R8_VITVI4.163e-6167.03Whole genome shotgun sequence of line PN40024, sca... [more]
A5BV44_VITVI4.163e-6167.03Putative uncharacterized protein OS=Vitis vinifera... [more]
B9I8F7_POPTR1.873e-5365.63Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B8AH77_ORYSI2.532e-5058.43Putative uncharacterized protein OS=Oryza sativa s... [more]
Q6Z8E2_ORYSJ7.366e-5057.87Putative relA/spoT homologous protein RSH2 OS=Oryz... [more]
Q0DYE4_ORYSJ7.366e-5057.87Os02g0699400 protein OS=Oryza sativa subsp. japoni... [more]
B9F1Y7_ORYSJ7.366e-5057.87Putative uncharacterized protein OS=Oryza sativa s... [more]
C5Y0F0_SORBI6.895e-4855.62Putative uncharacterized protein Sb04g030900 OS=So... [more]
A9RLB5_PHYPA5.291e-4048.85Predicted protein OS=Physcomitrella patens subsp. ... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 36..46
score
IPR004095TGSPFAMPF02824TGScoord: 118..170
score: 1.8

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT619144 ID=GT619144; Name=GT619144; organism=Lens culinaris; type=EST; length=705bp
ATATATAATACTAGCATGTTATTGGGATTATATTACATTTTAAATTTGTA
AAACGGTACATCATTTTATCAAGAATCCCAGCCCTCTTTTTTACAAATCA
GCACATTTCTGCCCCCATCTAATTTAGCTGCATTCAACCTATGAACAATT
ATTTACATTAGTAATTTCTTAATTGTGAAATGTTTTAGATTCTTACTTCA
AGAACATCACCATCTTTGAGTTTCGTATTAGGTAATACTAGATGTCCGTT
AATCAAAACTAGCTTCCCCTCCAAACCAGTTCTTTGTGCAGCATCAACAG
CACTGCTACCGGCTTTTAACCTCATAATTTCACCATGAGGCCAACATATA
ATTACCACTTCTCCAAGGTTAAGAGGACCCCGTGGATCATCAAACTTTGC
ATCATGCTTTGCTTGGCTGATACTAACTTCAGACCGCAATTGCTCTTCCC
AGGAAAGCATTGTTCTCAAAAGATGTACCTTATTATTGATGCTAGCATCT
ACAGAAGTTGATGGAATCACGTCAACTTTTGATTGGGATGTAATACTATC
CACTTGCTTGCCCTCAAAAACAGCAGATACAACAGCCCAGTATTCAGATT
CTTCTTGCTCGGTAAAATTGATAAGCTGAATGAATGTTGGCAGCCGGCGC
CCAAATTGGTCTTGCTTGTGATACATACCATCTTGACATAGTGTGTACTT
CTCTA
back to top
Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR004095TGS