GT619302

EST Overview
NameGT619302
Unique NameGT619302
TypeEST
OrganismLens culinaris (lentil)
Sequence length377
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Lens culinaris unigene v12010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Lens culinaris unigene v12011-01-06
Homology
BLAST of GT619302 vs. TrEMBL
Match: C6TG59_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.038e-38
Identity = 86/125 (68.80%), Postives = 98/125 (78.40%), Query Frame = 3
Query:    9 MVHHYIILLFCLCTSISAHQHEHDPSIISTMEQFSGYSIHEPTSI--SSLSGDAQGLQNQIDQLSGFSDAPAPAVTRVLYTHKDVLARRYVKNLMGIAGLSVREDAVGNIFGRWDGSEPELAAVA 377
            MVH  ++LL  L  + ++ QH+  PSI +TMEQFSGY IHEP S   SSLS DA  LQNQI +L+ FSD+PAP+VTRVLYT KDVL RRYVK  M +AGLSVREDAVGNIFGRWDG EPELAAVA
Sbjct:    1 MVHSLLLLLLLLTLTATSAQHD-GPSITATMEQFSGYKIHEPHSFQPSSLSVDAHALQNQIGELAAFSDSPAPSVTRVLYTDKDVLGRRYVKTQMELAGLSVREDAVGNIFGRWDGLEPELAAVA 124          
BLAST of GT619302 vs. TrEMBL
Match: D7MNN4_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_494642 PE=4 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 3.253e-36
Identity = 81/124 (65.32%), Postives = 95/124 (76.61%), Query Frame = 3
Query:   24 IILLFCLCTSISAHQHEHDPSIISTMEQFSGYSIHEPTSI------SSLSGDAQGLQNQIDQLSGFSDAPAPAVTRVLYTHKDVLARRYVKNLMGIAGLSVREDAVGNIFGRWDGSEPELAAVA 377
            ++L   L ++++  Q +H+   I TME FSGY IHEP         SSLS DA GLQNQID+LS FSDAP+P+VTRVLYT KDVLARRYVKNLM +AGL+VREDAVGNIFG+WDGSEP L AVA
Sbjct:   14 LVLSLLLPSNLAQQQQQHES--IRTMEDFSGYPIHEPGQFGSINLASSLSVDAPGLQNQIDELSNFSDAPSPSVTRVLYTDKDVLARRYVKNLMALAGLTVREDAVGNIFGKWDGSEPNLPAVA 135          
BLAST of GT619302 vs. TrEMBL
Match: B9RTE0_RICCO (N-carbamoyl-L-amino acid hydrolase, putative OS=Ricinus communis GN=RCOM_0908830 PE=4 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.754e-35
Identity = 85/118 (72.03%), Postives = 94/118 (79.66%), Query Frame = 3
Query:   42 LCTSISA--HQHEHDPSIISTMEQFSGYSIHEPT----SISSLSGDAQGLQNQIDQLSGFSDAPAPAVTRVLYTHKDVLARRYVKNLMGIAGLSVREDAVGNIFGRWDGSEPELAAVA 377
            L  SISA   Q+  DP I +TME FSGY IHE +    S SSLS D Q LQ QID+LS FSD PAP+VTRVLY+ KDVLARRY+KNLMG++GLSVREDAVGNIFGRWDGSEPELAAVA
Sbjct:   12 LLHSISAILAQNNDDP-ITTTMEAFSGYPIHELSHSIASPSSLSVDTQTLQKQIDELSAFSDTPAPSVTRVLYSEKDVLARRYIKNLMGLSGLSVREDAVGNIFGRWDGSEPELAAVA 128          
BLAST of GT619302 vs. TrEMBL
Match: Q8VXY9_ARATH (N-carbamyl-L-amino acid amidohydrolase-like protein OS=Arabidopsis thaliana GN=At5g43600 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 4.698e-35
Identity = 81/124 (65.32%), Postives = 92/124 (74.19%), Query Frame = 3
Query:   24 IILLFCLCTSISAHQHEHDPSIISTMEQFSGYSIHEPTSI------SSLSGDAQGLQNQIDQLSGFSDAPAPAVTRVLYTHKDVLARRYVKNLMGIAGLSVREDAVGNIFGRWDGSEPELAAVA 377
            ++L+  L  S  A Q +H+   I TME FSGY IHEP         SSLS DA GLQNQID+LS FSDAP+P+VTRVLYT KDV ARRYVKNLM +AGL+VREDAVGNIFG+WDG EP L AVA
Sbjct:   13 LLLISLLLPSSLAQQQQHES--IRTMEDFSGYPIHEPGQFGSINLASSLSVDAPGLQNQIDELSSFSDAPSPSVTRVLYTDKDVSARRYVKNLMALAGLTVREDAVGNIFGKWDGLEPNLPAVA 134          
BLAST of GT619302 vs. TrEMBL
Match: Q9FIY0_ARATH (N-carbamyl-L-amino acid amidohydrolase-like protein OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.850e-32
Identity = 73/99 (73.74%), Postives = 79/99 (79.80%), Query Frame = 3
Query:   99 MEQFSGYSIHEPTSI------SSLSGDAQGLQNQIDQLSGFSDAPAPAVTRVLYTHKDVLARRYVKNLMGIAGLSVREDAVGNIFGRWDGSEPELAAVA 377
            ME FSGY IHEP         SSLS DA GLQNQID+LS FSDAP+P+VTRVLYT KDV ARRYVKNLM +AGL+VREDAVGNIFG+WDG EP L AVA
Sbjct:    1 MEDFSGYPIHEPGQFGSINLASSLSVDAPGLQNQIDELSSFSDAPSPSVTRVLYTDKDVSARRYVKNLMALAGLTVREDAVGNIFGKWDGLEPNLPAVA 99          
BLAST of GT619302 vs. TrEMBL
Match: D7T7A4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_20.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018124001 PE=4 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 4.115e-31
Identity = 68/101 (67.33%), Postives = 79/101 (78.22%), Query Frame = 3
Query:   99 MEQFSGYSIHEPTSISSLSGDA--------QGLQNQIDQLSGFSDAPAPAVTRVLYTHKDVLARRYVKNLMGIAGLSVREDAVGNIFGRWDGSEPELAAVA 377
            MEQFSGY   EP S+SS S DA        QGLQ QID+LS FSD P+P+VTR+LY+  DV ARRY+KNLMG++GLS+REDAVGNIFGRW+G EPEL AVA
Sbjct:    1 MEQFSGYPTQEPDSVSSFSVDAVSSFSVDAQGLQKQIDELSNFSDTPSPSVTRILYSKMDVFARRYIKNLMGLSGLSIREDAVGNIFGRWEGYEPELTAVA 101          
BLAST of GT619302 vs. TrEMBL
Match: B9HUC9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_769208 PE=4 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.197e-30
Identity = 69/102 (67.65%), Postives = 77/102 (75.49%), Query Frame = 3
Query:   99 MEQFSGYSIHEPTS---------ISSLSGDAQGLQNQIDQLSGFSDAPAPAVTRVLYTHKDVLARRYVKNLMGIAGLSVREDAVGNIFGRWDGSEPELAAVA 377
            ME FSGY  HEPT          +S L  D   LQNQID+LS  SD PAP+VTR+LYT KDVLARRY+KNLMG++GLSVREDAVGNIFGRWDG EP+LA VA
Sbjct:    1 MEDFSGYPFHEPTDYPSAPPNSLLSFLRVDTTTLQNQIDELSTLSDTPAPSVTRILYTEKDVLARRYIKNLMGLSGLSVREDAVGNIFGRWDGYEPDLAPVA 102          
BLAST of GT619302 vs. TrEMBL
Match: C5YR14_SORBI (Putative uncharacterized protein Sb08g020250 OS=Sorghum bicolor GN=Sb08g020250 PE=4 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.261e-28
Identity = 68/122 (55.74%), Postives = 85/122 (69.67%), Query Frame = 3
Query:   24 IILLFCLCTSISAHQHEHDPSIISTMEQFSGYSIHEPTSISSLSGD----AQGLQNQIDQLSGFSDAPAPAVTRVLYTHKDVLARRYVKNLMGIAGLSVREDAVGNIFGRWDGSEPELAAVA 377
            ++LL  L  +ISA     D +   TMEQF+G++          S D    ++GLQ QID+L+ FSD+PAP+VTRVLYT KDV ARRY+K +M   GL+VREDAVGNIFGRW+GSEPEL AVA
Sbjct:   11 LVLLAFLLGTISAAAGHDDAAARRTMEQFAGFAAASGDGDGGPSSDFHVDSEGLQRQIDELASFSDSPAPSVTRVLYTDKDVQARRYIKGIMNQLGLAVREDAVGNIFGRWEGSEPELGAVA 132          
BLAST of GT619302 vs. TrEMBL
Match: C0P5R8_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.052e-26
Identity = 67/120 (55.83%), Postives = 81/120 (67.50%), Query Frame = 3
Query:   24 IILLFCLCTSISAHQHEHDPSIISTMEQFSGYSIHEPTS--ISSLSGDAQGLQNQIDQLSGFSDAPAPAVTRVLYTHKDVLARRYVKNLMGIAGLSVREDAVGNIFGRWDGSEPELAAVA 377
            + L F L   ISA     D +   TMEQF+G+   +      S    D++GLQ QID+L+ FSD+PAP+VTRVLYT KDV ARRY+K +M   GL VREDAVGNIFGRW+GSEP L AVA
Sbjct:   12 VFLAFLLV--ISAAAANDDAAARRTMEQFAGFPASDDGEGPSSDFHVDSEGLQRQIDELASFSDSPAPSVTRVLYTDKDVQARRYIKGIMNQLGLVVREDAVGNIFGRWEGSEPGLGAVA 129          
BLAST of GT619302 vs. TrEMBL
Match: B7ZWU3_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.052e-26
Identity = 67/120 (55.83%), Postives = 81/120 (67.50%), Query Frame = 3
Query:   24 IILLFCLCTSISAHQHEHDPSIISTMEQFSGYSIHEPTS--ISSLSGDAQGLQNQIDQLSGFSDAPAPAVTRVLYTHKDVLARRYVKNLMGIAGLSVREDAVGNIFGRWDGSEPELAAVA 377
            + L F L   ISA     D +   TMEQF+G+   +      S    D++GLQ QID+L+ FSD+PAP+VTRVLYT KDV ARRY+K +M   GL VREDAVGNIFGRW+GSEP L AVA
Sbjct:   12 VFLAFLLV--ISAAAANDDAAARRTMEQFAGFPASDDGEGPSSDFHVDSEGLQRQIDELASFSDSPAPSVTRVLYTDKDVQARRYIKGIMNQLGLVVREDAVGNIFGRWEGSEPGLGAVA 129          
BLAST of GT619302 vs. TAIR peptide
Match: AT5G43600.1 (| Symbols: ATAAH-2, UAH | ureidoglycolate amidohydrolase | chr5:17512651-17515280 FORWARD LENGTH=476)

HSP 1 Score: 150.599 bits (379), Expect = 2.162e-37
Identity = 81/124 (65.32%), Postives = 92/124 (74.19%), Query Frame = 3
Query:   24 IILLFCLCTSISAHQHEHDPSIISTMEQFSGYSIHEPTSI------SSLSGDAQGLQNQIDQLSGFSDAPAPAVTRVLYTHKDVLARRYVKNLMGIAGLSVREDAVGNIFGRWDGSEPELAAVA 377
            ++L+  L  S  A Q +H+   I TME FSGY IHEP         SSLS DA GLQNQID+LS FSDAP+P+VTRVLYT KDV ARRYVKNLM +AGL+VREDAVGNIFG+WDG EP L AVA
Sbjct:   13 LLLISLLLPSSLAQQQQHES--IRTMEDFSGYPIHEPGQFGSINLASSLSVDAPGLQNQIDELSSFSDAPSPSVTRVLYTDKDVSARRYVKNLMALAGLTVREDAVGNIFGKWDGLEPNLPAVA 134          
The following BLAST results are available for this feature:
BLAST of GT619302 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TG59_SOYBN2.038e-3868.80Putative uncharacterized protein OS=Glycine max PE... [more]
D7MNN4_ARALY3.253e-3665.32Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9RTE0_RICCO2.754e-3572.03N-carbamoyl-L-amino acid hydrolase, putative OS=Ri... [more]
Q8VXY9_ARATH4.698e-3565.32N-carbamyl-L-amino acid amidohydrolase-like protei... [more]
Q9FIY0_ARATH2.850e-3273.74N-carbamyl-L-amino acid amidohydrolase-like protei... [more]
D7T7A4_VITVI4.115e-3167.33Whole genome shotgun sequence of line PN40024, sca... [more]
B9HUC9_POPTR1.197e-3067.65Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C5YR14_SORBI3.261e-2855.74Putative uncharacterized protein Sb08g020250 OS=So... [more]
C0P5R8_MAIZE3.052e-2655.83Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
B7ZWU3_MAIZE3.052e-2655.83Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
back to top
BLAST of GT619302 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G43600.12.162e-3765.32| Symbols: ATAAH-2, UAH | ureidoglycolate amidohyd... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.630.10no descriptioncoord: 49..124
score: 3.5
NoneNo IPR availableSUPERFAMILY53187Zn-dependent exopeptidasescoord: 50..125
score: 1.9

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT619302 ID=GT619302; Name=GT619302; organism=Lens culinaris; type=EST; length=377bp
ATTCAGAAATGGTTCATCACTACATCATTCTACTCTTCTGCCTATGCACC
TCAATTTCAGCCCATCAACATGAACACGACCCTTCAATCATCTCAACCAT
GGAACAATTTTCTGGTTACTCAATCCACGAACCCACTTCCATCTCTTCAC
TATCTGGTGACGCTCAGGGTCTGCAGAACCAGATTGATCAACTTTCAGGA
TTTTCTGACGCACCTGCTCCAGCAGTAACCAGGGTTTTGTATACTCACAA
GGATGTTTTAGCTCGAAGGTATGTAAAAAACCTCATGGGAATTGCTGGTC
TATCTGTGAGAGAGGATGCTGTTGGTAACATATTTGGTCGTTGGGATGGA
AGTGAACCCGAGCTTGCTGCAGTTGCA
back to top