GH720778

EST Overview


Name	GH720778
Unique Name	GH720778
Type	EST
Organism	Pisum sativum (pea)
Sequence length	454

Libraries


Library Name	Type
LIBEST_024273 BACNI	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of GH720778 vs. TrEMBL
Match: Q9SDX4_ASTSI (Dynamin homolog OS=Astragalus sinicus GN=DH1 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 5.411e-63
Identity = 125/139 (89.93%), Postives = 137/139 (98.56%), Query Frame = 3

Query:   24 RTVGVISKIDQAATDQKAIAAVQALLLNKGPARASDIPWVALIGQSVSIATAQSGSAGSENSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQIQNRMKLRVPNLLSGLQGKSQVIQDELARLGESMVTTAEGT 440
            RT+GVISKIDQAA+DQK++AAVQALL N+GPARASDIPWVALIGQSV++ATAQSGSAGS+NSLETAWRAESESLKSILTGAP SKLGRIALV+ALAQQIQNRMKLR+PNLLSGLQGKSQV+QDELARLGESMVTT+EGT
Sbjct:  201 RTIGVISKIDQAASDQKSLAAVQALLSNQGPARASDIPWVALIGQSVALATAQSGSAGSDNSLETAWRAESESLKSILTGAPPSKLGRIALVEALAQQIQNRMKLRLPNLLSGLQGKSQVVQDELARLGESMVTTSEGT 339

[Close]

BLAST of GH720778 vs. TrEMBL
Match: Q5DMX3_CUCME (DRP OS=Cucumis melo GN=DRP PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 3.282e-60
Identity = 119/139 (85.61%), Postives = 132/139 (94.96%), Query Frame = 3

Query:   24 RTVGVISKIDQAATDQKAIAAVQALLLNKGPARASDIPWVALIGQSVSIATAQSGSAGSENSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQIQNRMKLRVPNLLSGLQGKSQVIQDELARLGESMVTTAEGT 440
            RT+GVISKIDQA++DQK++AAVQALLLN+GPARASDIPWVALIGQSVSIATAQSGS GSENS+ETAWRAESESLKSILTGAPQSKLGR+ALVDAL+QQI+ RMK+R+PNLLSGLQGKSQV+QDEL RLGE MV   EGT
Sbjct:  202 RTIGVISKIDQASSDQKSLAAVQALLLNQGPARASDIPWVALIGQSVSIATAQSGSVGSENSMETAWRAESESLKSILTGAPQSKLGRLALVDALSQQIRKRMKVRLPNLLSGLQGKSQVVQDELVRLGEQMVNGVEGT 340

[Close]

BLAST of GH720778 vs. TrEMBL
Match: B9SPD8_RICCO (Dynamin-2A, putative OS=Ricinus communis GN=RCOM_0497350 PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 8.085e-59
Identity = 116/139 (83.45%), Postives = 132/139 (94.96%), Query Frame = 3

Query:   24 RTVGVISKIDQAATDQKAIAAVQALLLNKGPARASDIPWVALIGQSVSIATAQSGSAGSENSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQIQNRMKLRVPNLLSGLQGKSQVIQDELARLGESMVTTAEGT 440
            RT+GVISKIDQAAT+ KA+AAVQALLLN+GP + SDIPWVALIGQSV+IA+AQSGSA SENSLETAWRAESESLKSILTGAPQSKLGR+ALV+ALA QI+NRMKLR+PNLLSGLQGKSQ++QDEL RLGE MV+++EGT
Sbjct:  206 RTIGVISKIDQAATESKALAAVQALLLNQGPPKTSDIPWVALIGQSVAIASAQSGSASSENSLETAWRAESESLKSILTGAPQSKLGRVALVEALAGQIRNRMKLRLPNLLSGLQGKSQIVQDELVRLGEQMVSSSEGT 344

[Close]

BLAST of GH720778 vs. TrEMBL
Match: D7SN01_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_89.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00037193001 PE=4 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 5.241e-58
Identity = 116/139 (83.45%), Postives = 131/139 (94.24%), Query Frame = 3

Query:   24 RTVGVISKIDQAATDQKAIAAVQALLLNKGPARASDIPWVALIGQSVSIATAQSGSAGSENSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQIQNRMKLRVPNLLSGLQGKSQVIQDELARLGESMVTTAEGT 440
            RT+GVISKIDQAA+DQK +AAVQALLLN+GP   S++PWVALIGQSVSIA+AQSGS GSENSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQI++RMK+R+PNLLSGLQGKSQ++ DELARLGE MV ++EGT
Sbjct:  201 RTIGVISKIDQAASDQKILAAVQALLLNQGPRSTSEMPWVALIGQSVSIASAQSGSVGSENSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQIRSRMKVRLPNLLSGLQGKSQIVGDELARLGEQMVHSSEGT 339

[Close]

BLAST of GH720778 vs. TrEMBL
Match: B9N788_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_583471 PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 5.794e-57
Identity = 113/139 (81.29%), Postives = 130/139 (93.53%), Query Frame = 3

Query:   24 RTVGVISKIDQAATDQKAIAAVQALLLNKGPARASDIPWVALIGQSVSIATAQSGSAGSENSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQIQNRMKLRVPNLLSGLQGKSQVIQDELARLGESMVTTAEGT 440
            RTVG+ISKIDQAAT+ KAIAAVQALLLN+GP + SDIPWVALIGQSVSIA+ QSGSA SE+SLETAWRAESESLKSILTGAPQSKLGR+ALVD LA QI++RMKLR+P+LLSGLQGKSQ++QDE+ RLGE MV+++EGT
Sbjct:  205 RTVGIISKIDQAATESKAIAAVQALLLNQGPPKTSDIPWVALIGQSVSIASVQSGSASSESSLETAWRAESESLKSILTGAPQSKLGRVALVDVLAGQIRSRMKLRLPSLLSGLQGKSQIVQDEMVRLGEQMVSSSEGT 343

[Close]

BLAST of GH720778 vs. TrEMBL
Match: D7TGM4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_35.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00023155001 PE=4 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.093e-55
Identity = 111/139 (79.86%), Postives = 127/139 (91.37%), Query Frame = 3

Query:   24 RTVGVISKIDQAATDQKAIAAVQALLLNKGPARASDIPWVALIGQSVSIATAQSGSAGSENSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQIQNRMKLRVPNLLSGLQGKSQVIQDELARLGESMVTTAEGT 440
            RT+GVISKIDQAA + K +AAVQALL N+GP   SDIPWVALIGQSVSIA+AQSG+AGSENSLETAWRAESE+LKSIL GAPQ+KLGR+ALVDALAQQI+NRMK+R+PNLLSGLQGKSQ++Q+EL RLGE MV + EGT
Sbjct:  199 RTIGVISKIDQAAGEPKILAAVQALLSNQGPRSTSDIPWVALIGQSVSIASAQSGNAGSENSLETAWRAESETLKSILPGAPQNKLGRVALVDALAQQIRNRMKVRLPNLLSGLQGKSQIVQEELVRLGEQMVDSVEGT 337

[Close]

BLAST of GH720778 vs. TrEMBL
Match: A5B0G4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018225 PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.093e-55
Identity = 111/139 (79.86%), Postives = 127/139 (91.37%), Query Frame = 3

Query:   24 RTVGVISKIDQAATDQKAIAAVQALLLNKGPARASDIPWVALIGQSVSIATAQSGSAGSENSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQIQNRMKLRVPNLLSGLQGKSQVIQDELARLGESMVTTAEGT 440
            RT+GVISKIDQAA + K +AAVQALL N+GP   SDIPWVALIGQSVSIA+AQSG+AGSENSLETAWRAESE+LKSIL GAPQ+KLGR+ALVDALAQQI+NRMK+R+PNLLSGLQGKSQ++Q+EL RLGE MV + EGT
Sbjct:  311 RTIGVISKIDQAAGEPKILAAVQALLSNQGPRSTSDIPWVALIGQSVSIASAQSGNAGSENSLETAWRAESETLKSILPGAPQNKLGRVALVDALAQQIRNRMKVRLPNLLSGLQGKSQIVQEELVRLGEQMVDSVEGT 449

[Close]

BLAST of GH720778 vs. TrEMBL
Match: B9SBU7_RICCO (Dynamin-2A, putative OS=Ricinus communis GN=RCOM_1044670 PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 2.434e-55
Identity = 112/139 (80.58%), Postives = 128/139 (92.09%), Query Frame = 3

Query:   24 RTVGVISKIDQAATDQKAIAAVQALLLNKGPARASDIPWVALIGQSVSIATAQSGSAGSENSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQIQNRMKLRVPNLLSGLQGKSQVIQDELARLGESMVTTAEGT 440
            RT+GVISKIDQA +DQKA+AAVQALLLN+GP + +DIPW+ALIGQSV+IA+AQSGS   ENSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQI+ R+K+R+PNLLSGLQGKSQ++QDEL RLGE MV + EGT
Sbjct:  200 RTIGVISKIDQAVSDQKALAAVQALLLNQGPPKTADIPWIALIGQSVAIASAQSGS---ENSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQIRKRVKVRLPNLLSGLQGKSQIVQDELVRLGEQMVESPEGT 335

[Close]

BLAST of GH720778 vs. TrEMBL
Match: B9N1N0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_743875 PE=4 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 2.434e-55
Identity = 113/139 (81.29%), Postives = 129/139 (92.81%), Query Frame = 3

Query:   24 RTVGVISKIDQAATDQKAIAAVQALLLNKGPARASDIPWVALIGQSVSIATAQSGSAGSENSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQIQNRMKLRVPNLLSGLQGKSQVIQDELARLGESMVTTAEGT 440
            RTVGVISKIDQAATDQKA+AAVQALLLN+GP + +DIPW+ALIGQSVSIA+AQSGS   E+SLETAW+AESESLK+ILTGAPQSKLGRIAL+DALAQQI+ RMK+R+PN+LSGLQGKSQ +QDEL RLGE MV +AEGT
Sbjct:  199 RTVGVISKIDQAATDQKALAAVQALLLNQGPPKTTDIPWIALIGQSVSIASAQSGS---ESSLETAWKAESESLKTILTGAPQSKLGRIALLDALAQQIRKRMKVRLPNVLSGLQGKSQTVQDELMRLGEQMVQSAEGT 334

[Close]

BLAST of GH720778 vs. TrEMBL
Match: B9N0H6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_596773 PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 5.423e-55
Identity = 114/139 (82.01%), Postives = 128/139 (92.09%), Query Frame = 3

Query:   24 RTVGVISKIDQAATDQKAIAAVQALLLNKGPARASDIPWVALIGQSVSIATAQSGSAGSENSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQIQNRMKLRVPNLLSGLQGKSQVIQDELARLGESMVTTAEGT 440
            RTVGVISKIDQAAT+ KA+AAVQALLLN+GP + SDIPWVALIGQSVSIA+AQS SA  ENSLETAWRAESESLKSILTGAP SKLGR+ALVDALA QI++RMKLR+PNLLSGLQGKSQ++QDEL  LGE MV+++EGT
Sbjct:  202 RTVGVISKIDQAATESKALAAVQALLLNQGPPKTSDIPWVALIGQSVSIASAQSASA-PENSLETAWRAESESLKSILTGAPPSKLGRVALVDALAGQIRSRMKLRLPNLLSGLQGKSQIVQDELVGLGEQMVSSSEGT 339

[Close]

BLAST of GH720778 vs. SwissProt
Match: DRP2B_ARATH (Dynamin-2B OS=Arabidopsis thaliana GN=DRP2B PE=1 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 5.620e-56
Identity = 111/139 (79.86%), Postives = 129/139 (92.81%), Query Frame = 3

Query:   24 RTVGVISKIDQAATDQKAIAAVQALLLNKGPARASDIPWVALIGQSVSIATAQSGSAGSENSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQIQNRMKLRVPNLLSGLQGKSQVIQDELARLGESMVTTAEGT 440
            RTVG+ISKIDQAA + K++AAVQALL N+GP + +DIPWVALIGQSVSIA+AQSG  GSENSLETAWRAESESLKSILTGAPQSKLGRIALVD LA QI++RMKLR+PN+L+GLQGKSQ++QDELARLGE +V++AEGT
Sbjct:  198 RTVGIISKIDQAAENPKSLAAVQALLSNQGPPKTTDIPWVALIGQSVSIASAQSG--GSENSLETAWRAESESLKSILTGAPQSKLGRIALVDTLASQIRSRMKLRLPNILTGLQGKSQIVQDELARLGEQLVSSAEGT 334

[Close]

BLAST of GH720778 vs. SwissProt
Match: DRP2A_ARATH (Dynamin-2A OS=Arabidopsis thaliana GN=DRP2A PE=1 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 2.361e-54
Identity = 108/139 (77.70%), Postives = 126/139 (90.65%), Query Frame = 3

Query:   24 RTVGVISKIDQAATDQKAIAAVQALLLNKGPARASDIPWVALIGQSVSIATAQSGSAGSENSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQIQNRMKLRVPNLLSGLQGKSQVIQDELARLGESMVTTAEGT 440
            RT+G+I KIDQAA + KA+AAVQALL N+GP + +DIPWVA+IGQSVSIA+AQSGS   ENSLETAWRAESESLKSILTGAPQSKLGRIALVD LA QI++RMKLR+P++LSGLQGKSQ++QDELARLGE +V +AEGT
Sbjct:  198 RTIGIIGKIDQAAENSKALAAVQALLSNQGPPKTTDIPWVAVIGQSVSIASAQSGSG--ENSLETAWRAESESLKSILTGAPQSKLGRIALVDTLASQIRSRMKLRLPSVLSGLQGKSQIVQDELARLGEQLVNSAEGT 334

[Close]

BLAST of GH720778 vs. TAIR peptide
Match: AT1G59610.1 (| Symbols: ADL3, CF1, DRP2B, DL3 | dynamin-like 3 | chr1:21893413-21900780 FORWARD LENGTH=920)

HSP 1 Score: 216.083 bits (549), Expect = 6.620e-57
Identity = 111/139 (79.86%), Postives = 129/139 (92.81%), Query Frame = 3

Query:   24 RTVGVISKIDQAATDQKAIAAVQALLLNKGPARASDIPWVALIGQSVSIATAQSGSAGSENSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQIQNRMKLRVPNLLSGLQGKSQVIQDELARLGESMVTTAEGT 440
            RTVG+ISKIDQAA + K++AAVQALL N+GP + +DIPWVALIGQSVSIA+AQSG  GSENSLETAWRAESESLKSILTGAPQSKLGRIALVD LA QI++RMKLR+PN+L+GLQGKSQ++QDELARLGE +V++AEGT
Sbjct:  198 RTVGIISKIDQAAENPKSLAAVQALLSNQGPPKTTDIPWVALIGQSVSIASAQSG--GSENSLETAWRAESESLKSILTGAPQSKLGRIALVDTLASQIRSRMKLRLPNILTGLQGKSQIVQDELARLGEQLVSSAEGT 334

[Close]

BLAST of GH720778 vs. TAIR peptide
Match: AT1G10290.1 (| Symbols: ADL6, DRP2A | dynamin-like protein 6 | chr1:3370774-3377120 FORWARD LENGTH=914)

HSP 1 Score: 210.69 bits (535), Expect = 2.781e-55
Identity = 108/139 (77.70%), Postives = 126/139 (90.65%), Query Frame = 3

Query:   24 RTVGVISKIDQAATDQKAIAAVQALLLNKGPARASDIPWVALIGQSVSIATAQSGSAGSENSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQIQNRMKLRVPNLLSGLQGKSQVIQDELARLGESMVTTAEGT 440
            RT+G+I KIDQAA + KA+AAVQALL N+GP + +DIPWVA+IGQSVSIA+AQSGS   ENSLETAWRAESESLKSILTGAPQSKLGRIALVD LA QI++RMKLR+P++LSGLQGKSQ++QDELARLGE +V +AEGT
Sbjct:  198 RTIGIIGKIDQAAENSKALAAVQALLSNQGPPKTTDIPWVAVIGQSVSIASAQSGSG--ENSLETAWRAESESLKSILTGAPQSKLGRIALVDTLASQIRSRMKLRLPSVLSGLQGKSQIVQDELARLGEQLVNSAEGT 334

The following BLAST results are available for this feature:

BLAST of GH720778 vs. TrEMBL
BLAST of GH720778 vs. SwissProt
BLAST of GH720778 vs. TAIR peptide

BLAST of GH720778 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q9SDX4_ASTSI	5.411e-63	89.93	Dynamin homolog OS=Astragalus sinicus GN=DH1 PE=2 ...	[more]
Q5DMX3_CUCME	3.282e-60	85.61	DRP OS=Cucumis melo GN=DRP PE=3 SV=1	[more]
B9SPD8_RICCO	8.085e-59	83.45	Dynamin-2A, putative OS=Ricinus communis GN=RCOM_0...	[more]
D7SN01_VITVI	5.241e-58	83.45	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9N788_POPTR	5.794e-57	81.29	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7TGM4_VITVI	1.093e-55	79.86	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5B0G4_VITVI	1.093e-55	79.86	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9SBU7_RICCO	2.434e-55	80.58	Dynamin-2A, putative OS=Ricinus communis GN=RCOM_1...	[more]
B9N1N0_POPTR	2.434e-55	81.29	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9N0H6_POPTR	5.423e-55	82.01	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

BLAST of GH720778 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 2


Match Name	E-value	Identity	Description
DRP2B_ARATH	5.620e-56	79.86	Dynamin-2B OS=Arabidopsis thaliana GN=DRP2B PE=1 S...	[more]
DRP2A_ARATH	2.361e-54	77.70	Dynamin-2A OS=Arabidopsis thaliana GN=DRP2A PE=1 S...	[more]

BLAST of GH720778 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G59610.1	6.620e-57	79.86	\| Symbols: ADL3, CF1, DRP2B, DL3 \| dynamin-like 3 ...	[more]
AT1G10290.1	2.781e-55	77.70	\| Symbols: ADL6, DRP2A \| dynamin-like protein 6 \| ...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300	no description	coord: 7..124 score: 1
None	No IPR available	PANTHER	PTHR11566	DYNAMIN	coord: 8..146 score: 5.6
None	No IPR available	PANTHER	PTHR11566:SF10	DYNAMIN-LIKE	coord: 8..146 score: 5.6
None	No IPR available	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..126 score: 9.7

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GH720778 ID=GH720778; Name=GH720778; organism=Pisum sativum; type=EST; length=454bp
TAGCGTGGTCGCGGCCGAGGTACAGAACTGTTGGTGTTATTAGTAAAATA
GATCAAGCTGCAACAGACCAAAAAGCAATAGCTGCAGTTCAAGCACTTCT
ACTCAATAAGGGTCCTGCAAGAGCATCAGACATTCCTTGGGTTGCACTAA
TCGGGCAATCTGTTTCGATAGCTACGGCACAGTCTGGGTCTGCTGGTTCT
GAAAATTCTTTAGAAACTGCATGGAGAGCAGAGAGTGAAAGCCTCAAGTC
CATATTGACAGGAGCCCCTCAAAGTAAGCTTGGAAGGATAGCTTTGGTGG
ATGCTTTGGCACAGCAGATTCAGAATCGCATGAAGCTGCGGGTGCCTAAC
CTTCTTTCTGGGTTACAAGGGAAGTCTCAGGTAATTCAGGATGAATTGGC
GAGGCTTGGTGAGTCAATGGTCACCACTGCAGAGGGTACCTGCCCGGGCG
GCCG

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