CD860867

EST Overview
NameCD860867
Unique NameCD860867
TypeEST
OrganismPisum sativum (pea)
Sequence length109
Libraries
Library NameType
LIBEST_014004 TNEcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology
BLAST of CD860867 vs. TrEMBL
Match: B9SEE4_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_0703150 PE=4 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.059e-9
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = -3
Query:    3 DWDAVIDAEARRRKWLESNPESSHHDSPVVFDTS 104
            DWD+VIDAE RRRKWLESNPESS +D PVVFDTS
Sbjct:  123 DWDSVIDAEVRRRKWLESNPESSTNDDPVVFDTS 156          
BLAST of CD860867 vs. TrEMBL
Match: A9P991_POPTR (Light harvesting-like protein 3 OS=Populus trichocarpa GN=Lil3_3 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.059e-9
Identity = 29/34 (85.29%), Postives = 30/34 (88.24%), Query Frame = -3
Query:    3 DWDAVIDAEARRRKWLESNPESSHHDSPVVFDTS 104
            DWDAVIDAE RRRKWLE NPESS +D PVVFDTS
Sbjct:  121 DWDAVIDAEVRRRKWLEGNPESSSNDDPVVFDTS 154          
BLAST of CD860867 vs. TrEMBL
Match: B4UWB8_ARAHY (Putative Lil3 protein (Fragment) OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.992e-9
Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = -3
Query:    3 DWDAVIDAEARRRKWLESNPESSHHDSPVVFDTS 104
            DWD+VIDAEA RRKWLE NPESS +D+PVVFDTS
Sbjct:   99 DWDSVIDAEASRRKWLEDNPESSSNDNPVVFDTS 132          
BLAST of CD860867 vs. TrEMBL
Match: D7UDW4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_204.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00003693001 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.825e-9
Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = -3
Query:    3 DWDAVIDAEARRRKWLESNPESSHHDSPVVFDTS 104
            +WDAVIDAE RRRKWLE NPESS +D PVVFDTS
Sbjct:   91 NWDAVIDAEVRRRKWLEDNPESSSNDDPVVFDTS 124          
BLAST of CD860867 vs. TrEMBL
Match: B9N2V9_POPTR (Light harvesting-like protein 3 OS=Populus trichocarpa GN=Lil3_2 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 7.825e-9
Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = -3
Query:    3 DWDAVIDAEARRRKWLESNPESSHHDSPVVFDTS 104
            DWDAVIDAEARRRKWL+ NPESS ++ PVVFDTS
Sbjct:  122 DWDAVIDAEARRRKWLQCNPESSSNNDPVVFDTS 155          
BLAST of CD860867 vs. TrEMBL
Match: A9NXM6_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.335e-8
Identity = 27/35 (77.14%), Postives = 30/35 (85.71%), Query Frame = -3
Query:    3 IDWDAVIDAEARRRKWLESNPESSHHDSPVVFDTS 107
            +DWDAVIDAE RRRKWLE NPE+S +  PVVFDTS
Sbjct:  234 VDWDAVIDAEVRRRKWLEDNPETSSNKDPVVFDTS 268          
BLAST of CD860867 vs. TrEMBL
Match: A9SHE3_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=Sep4b PE=4 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.476e-7
Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = -3
Query:    3 IDWDAVIDAEARRRKWLESNPESSHHDSPVVFDTS 107
            IDWDAVIDAE  RRKWLE NPE+S++  PVVFDT+
Sbjct:  244 IDWDAVIDAEVVRRKWLEENPETSNNAEPVVFDTA 278          
BLAST of CD860867 vs. TrEMBL
Match: C6TDN2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.517e-7
Identity = 25/34 (73.53%), Postives = 30/34 (88.24%), Query Frame = -3
Query:    3 DWDAVIDAEARRRKWLESNPESSHHDSPVVFDTS 104
            DWDAVIDAE +RRKWL  NPESS +D+PVVF+T+
Sbjct:   79 DWDAVIDAEVKRRKWLGDNPESSTNDNPVVFNTA 112          
BLAST of CD860867 vs. TrEMBL
Match: C5XT69_SORBI (Putative uncharacterized protein Sb04g002190 OS=Sorghum bicolor GN=Sb04g002190 PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.517e-7
Identity = 26/35 (74.29%), Postives = 29/35 (82.86%), Query Frame = -3
Query:    3 IDWDAVIDAEARRRKWLESNPESSHHDSPVVFDTS 107
            +DWDAVIDAEARRRKWLE  PE++  D  VVFDTS
Sbjct:  117 VDWDAVIDAEARRRKWLEDYPEATSTDEAVVFDTS 151          
BLAST of CD860867 vs. TrEMBL
Match: B6U5P1_MAIZE (Lil3 protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.517e-7
Identity = 26/35 (74.29%), Postives = 29/35 (82.86%), Query Frame = -3
Query:    3 IDWDAVIDAEARRRKWLESNPESSHHDSPVVFDTS 107
            +DWDAVIDAEARRRKWLE  PE++  D  VVFDTS
Sbjct:  114 VDWDAVIDAEARRRKWLEDYPEATSTDDAVVFDTS 148          
BLAST of CD860867 vs. TAIR peptide
Match: AT4G17600.1 (| Symbols: LIL3:1 | Chlorophyll A-B binding family protein | chr4:9803759-9804714 FORWARD LENGTH=262)

HSP 1 Score: 57.7658 bits (138), Expect = 1.670e-9
Identity = 24/34 (70.59%), Postives = 30/34 (88.24%), Query Frame = -3
Query:    3 DWDAVIDAEARRRKWLESNPESSHHDSPVVFDTS 104
            DWD+VI AEA+RRKWLE NPE++ +D PV+FDTS
Sbjct:  124 DWDSVIVAEAKRRKWLEENPETTSNDEPVLFDTS 157          
BLAST of CD860867 vs. TAIR peptide
Match: AT5G47110.1 (| Symbols: LIL3:2 | Chlorophyll A-B binding family protein | chr5:19134218-19135238 REVERSE LENGTH=258)

HSP 1 Score: 53.9138 bits (128), Expect = 2.411e-8
Identity = 23/34 (67.65%), Postives = 29/34 (85.29%), Query Frame = -3
Query:    3 DWDAVIDAEARRRKWLESNPESSHHDSPVVFDTS 104
            DWD+VI +EA+RRKWLE NPE++ +D  VVFDTS
Sbjct:  121 DWDSVIVSEAKRRKWLEDNPETTSNDELVVFDTS 154          
The following BLAST results are available for this feature:
BLAST of CD860867 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9SEE4_RICCO2.059e-985.29Transcription factor, putative OS=Ricinus communis... [more]
A9P991_POPTR2.059e-985.29Light harvesting-like protein 3 OS=Populus trichoc... [more]
B4UWB8_ARAHY5.992e-982.35Putative Lil3 protein (Fragment) OS=Arachis hypoga... [more]
D7UDW4_VITVI7.825e-982.35Whole genome shotgun sequence of line PN40024, sca... [more]
B9N2V9_POPTR7.825e-982.35Light harvesting-like protein 3 OS=Populus trichoc... [more]
A9NXM6_PICSI1.335e-877.14Putative uncharacterized protein OS=Picea sitchens... [more]
A9SHE3_PHYPA1.476e-774.29Predicted protein OS=Physcomitrella patens subsp. ... [more]
C6TDN2_SOYBN2.517e-773.53Putative uncharacterized protein OS=Glycine max PE... [more]
C5XT69_SORBI2.517e-774.29Putative uncharacterized protein Sb04g002190 OS=So... [more]
B6U5P1_MAIZE2.517e-774.29Lil3 protein OS=Zea mays PE=2 SV=1[more]
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BLAST of CD860867 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G17600.11.670e-970.59| Symbols: LIL3:1 | Chlorophyll A-B binding family... [more]
AT5G47110.12.411e-867.65| Symbols: LIL3:2 | Chlorophyll A-B binding family... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CD860867 ID=CD860867; Name=CD860867; organism=Pisum sativum; type=EST; length=109bp
ATAGAGGTGTCAAACACTACAGGACTGTCATGGTGGGATGATTCTGGGTT
ACTCTCAAGCCATTTTCTCCTCCTCGCCTCAGCATCAATAACAGCATCCC
AATCGATGG
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