CD859189

EST Overview


Name	CD859189
Unique Name	CD859189
Type	EST
Organism	Pisum sativum (pea)
Sequence length	464

Libraries


Library Name	Type
LIBEST_013999 CNI	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

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BLAST of CD859189 vs. TrEMBL
Match: C6TNY8_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 7.673e-49
Identity = 106/154 (68.83%), Postives = 113/154 (73.38%), Query Frame = -2

Query:    2 NAEIISVDAQESYGGGVIVLVTGFMTGKDDIKQKFTQSFFLAPQEKGYFVLNDVFRYVDENGIEESDHIIVSPTSTDNVSEPPVLEAQVPEQISVTVEDGVGEEVYNPXXXXXXXXXXXXXXXXXXXEIPDDSQMISGLASQIEEVPARAAARI 463
            +AEI+SVDAQESY GGVIVLVTGFM GKDDIKQKFTQ FFLAPQEKGYFVLNDVFRYVDENGI+ S H I SP   D VS P VLE QV EQISVT EDG  E VYNP                   EIPDDSQM++GLASQIEEVP ++ A I
Sbjct:   78 SAEIVSVDAQESYDGGVIVLVTGFMIGKDDIKQKFTQCFFLAPQEKGYFVLNDVFRYVDENGIQGSAHDIGSPAPPDTVSNPSVLETQVSEQISVTAEDGDEEVVYNPENGQAAIEEEEAPVPEVLDEIPDDSQMVAGLASQIEEVPKKSYAYI 231

[Close]

BLAST of CD859189 vs. TrEMBL
Match: B9GQM2_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_711506 PE=4 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.033e-25
Identity = 60/111 (54.05%), Postives = 78/111 (70.27%), Query Frame = -2

Query:  140 AEIISVDAQESYGGGVIVLVTGFMTGKDDIKQKFTQSFFLAPQEKGYFVLNDVFRYVD----ENGIEESDHIIVSPTSTDNVSEPPVLEAQVPEQISVTVEDGVGEEVYNP 460
            AEI++VD+QESY GGV+VLVTG++ G D+++QKFTQSFFLAPQ+KGYFVLNDVFRYVD    +NG +E      +P + D    P   E  + E  +   E+ +G EVYNP
Sbjct:   77 AEIVTVDSQESYKGGVLVLVTGYLNGNDNLRQKFTQSFFLAPQDKGYFVLNDVFRYVDDSTHQNGNQEPASNFEAPVAPDQ-DTPHTQETHISEPTAALSEEVIGGEVYNP 186

[Close]

BLAST of CD859189 vs. TrEMBL
Match: A5AXU8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024360 PE=4 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.721e-24
Identity = 69/156 (44.23%), Postives = 92/156 (58.97%), Query Frame = -2

Query:    2 AEIISVDAQESYGGGVIVLVTGFMTGKDDIKQKFTQSFFLAPQEKGYFVLNDVFRYVDENGIEESDHIIVSPTS---TDNVSEPPVLEAQVPEQISVTVEDGVGEEVYNPXXXXXXXXXXXXXXXXXXXEIPDDSQMISGLASQIEEVPARAAARI 460
            AEI SVDAQES+GGGV+VLVTG++TGKD+  + FTQSFFLAPQ+KGYFVLND+FRY+++   ++ +  +VS      T      PV E  + E      E+ V EEVYNP                   +   D QM++   S+I EVP ++ A I
Sbjct:  110 AEIKSVDAQESFGGGVLVLVTGYLTGKDNRSRDFTQSFFLAPQDKGYFVLNDLFRYIEDVKYQDGNPGLVSEVEAPLTPEQDPSPVQENHILEPTPEVXEE-VNEEVYNPSENGEASVEEEEAPVAEVVDEIQDDQMVTISDSKILEVPKKSYASI 264

[Close]

BLAST of CD859189 vs. TrEMBL
Match: D7T585_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_216.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00003923001 PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.248e-24
Identity = 69/156 (44.23%), Postives = 93/156 (59.62%), Query Frame = -2

Query:    2 AEIISVDAQESYGGGVIVLVTGFMTGKDDIKQKFTQSFFLAPQEKGYFVLNDVFRYVDENGIEESDHIIVSPTS---TDNVSEPPVLEAQVPEQISVTVEDGVGEEVYNPXXXXXXXXXXXXXXXXXXXEIPDDSQMISGLASQIEEVPARAAARI 460
            AEI SVDAQES+GGGV+VLVTG++TGKD+  + FTQSFFLAPQ+KGYFVLND+FRY+++   ++ +  +VS      T      PV E  + E  +  V + V EEVYNP                   +   D QM++   S+I EVP ++ A I
Sbjct:   77 AEIKSVDAQESFGGGVLVLVTGYLTGKDNRSRDFTQSFFLAPQDKGYFVLNDLFRYIEDVKYQDGNPGLVSEVEAPLTPEQDPSPVQENHILEP-TPEVPEEVNEEVYNPSENGEASVEEEEAPVAEVVDEIQDDQMVTISDSKILEVPKKSYASI 231

[Close]

BLAST of CD859189 vs. TrEMBL
Match: D7MVS6_ARALY (Nuclear transport factor 2 family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_920438 PE=4 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.232e-23
Identity = 69/170 (40.59%), Postives = 93/170 (54.71%), Query Frame = -2

Query:    2 NAEIISVDAQESYGGGVIVLVTGFMTGKDDIKQKFTQSFFLAPQEKGYFVLNDVFRYVDENGIEESDHIIVS----PTST------------DNVSEPPVLEAQVPEQISVTVEDGVGEEVYNPXXXXXXXXXXXXXXXXXXXEIPDDSQMISGLASQIEEVPARAAARI 463
            +AEI +VD+QESYGGGV+VLVTG++TGKD++++ F+Q+FFLAPQE GYFVLND+FRY DE  I   + I V+    P +T            D V E  V E    +Q  V  +   G EV+ P                   E P ++Q +    S+  EVP R+ A I
Sbjct:   79 SAEIATVDSQESYGGGVLVLVTGYLTGKDNVRRMFSQTFFLAPQETGYFVLNDMFRYSDEAAIVHGNQIPVNNIQVPVNTYQDTDASKDIPDDFVQEKYVQENHAVKQTEVLSKSINGPEVFTPSEDEQVSATEEVPAPEIVNEAPIEAQKVGESDSRTGEVPKRSYASI 248

[Close]

BLAST of CD859189 vs. TrEMBL
Match: D7SZ91_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2623.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00006504001 PE=4 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.234e-22
Identity = 59/110 (53.64%), Postives = 77/110 (70.00%), Query Frame = -2

Query:  140 AEIISVDAQESYGGGVIVLVTGFMTGKDDIKQKFTQSFFLAPQEKGYFVLNDVFRYVDENGIEESDHIIVSPTS---TDNVSEPPVLEAQVPEQISVTVEDGVGEEVYNP 460
            AEI SVDAQES+GGGV+VLVTG++TGKD+  + FTQSFFLAPQ+KGYFVLND+FRY+++   ++ +  +VS      T      PV E  + E  +  V + V EEVYNP
Sbjct:   77 AEIKSVDAQESFGGGVLVLVTGYLTGKDNRSRDFTQSFFLAPQDKGYFVLNDLFRYIEDVKYQDGNPGLVSEVEAPLTPEQDPSPVQENHILEP-TPEVPEEVNEEVYNP 185

[Close]

BLAST of CD859189 vs. TrEMBL
Match: B9T3B3_RICCO (RNA binding protein, putative OS=Ricinus communis GN=RCOM_1749860 PE=4 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.039e-21
Identity = 66/168 (39.29%), Postives = 95/168 (56.55%), Query Frame = -2

Query:    2 AEIISVDAQESYGGGVIVLVTGFMTGKDDIKQKFTQSFFLAPQEKGYFVLNDVFRYVDENGIEESDHIIVSPTSTDNVSEPPVL---------EAQVPEQISVTVEDGVGEEVYNP-XXXXXXXXXXXXXXXXXXXEIPD-----DSQMISGLASQIEEVPARAAARI 460
            AEI +VD+QES+ GGV+VLVTG++ G D+++QKFTQSFFLAPQ+ GYFVLNDVFRYVD+   +  +  +V      N+ E PV          E  + EQ +   ++   EEV +P                    E+P+     DSQ+ +   S++EE+P ++ A I
Sbjct:   80 AEISTVDSQESFNGGVLVLVTGYLNGNDNLRQKFTQSFFLAPQDNGYFVLNDVFRYVDDANQQNENLNVV------NIVEAPVAAEQDSAYEQENHISEQPAALSDEANEEEVCDPSENEDVSIEEDETPVPEVVDEVPEVLEMADSQIAAESISKVEELPKKSYASI 241

[Close]

BLAST of CD859189 vs. TrEMBL
Match: B9RLM4_RICCO (RNA binding protein, putative OS=Ricinus communis GN=RCOM_1469490 PE=4 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.968e-21
Identity = 56/103 (54.37%), Postives = 73/103 (70.87%), Query Frame = -2

Query:  152 AEIISVDAQESYGGGVIVLVTGFMTGKDDIKQKFTQSFFLAPQEKGYFVLNDVFRYVDENGIEESDHIIVSPTSTDNVSEPPVLEAQVPEQISVTVEDGVGEE 460
            AE+ + DAQESY  GVIVLVTG +TGKD+IK+KF+Q+FFLAPQ+KGYFVLNDVFR+V ENG   ++ ++V+  S D     P +E    + ISV V+     E
Sbjct:   78 AEVKNADAQESYEKGVIVLVTGCLTGKDNIKKKFSQTFFLAPQDKGYFVLNDVFRFVGENGSLPNNTVLVNGVSEDATPITPTVEPGWGD-ISVAVDPATSFE 179

[Close]

BLAST of CD859189 vs. TrEMBL
Match: B8LK80_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.484e-20
Identity = 56/116 (48.28%), Postives = 72/116 (62.07%), Query Frame = -2

Query:  146 AEIISVDAQESYGGGVIVLVTGFMTGKDDIKQKFTQSFFLAPQEKGYFVLNDVFRYVDE-----------NGIEESDHIIVSPTSTDNVSEPPVLEAQVPEQISVTVEDGVGEEVY 460
            AEI +VD+Q+SY  GV+VLVTG + GKD +K+ FTQSFFLAPQ+KGYFVLNDVFRY+DE           NGI E    + +P      + P  L   V + +S   E+   EE+Y
Sbjct:   79 AEIKTVDSQDSYSQGVLVLVTGALNGKDGVKRNFTQSFFLAPQDKGYFVLNDVFRYLDEPPQPETTNVFINGITEQTSKVPAPEPAAEPAPPQELHV-VDQPVSELEEEPQVEEIY 193

[Close]

BLAST of CD859189 vs. TrEMBL
Match: Q9LSG2_ARATH (RNA-binding protein-like OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 9.775e-20
Identity = 63/171 (36.84%), Postives = 90/171 (52.63%), Query Frame = -2

Query:    2 NAEIISVDAQESYGGGVIVLVTGFMTGKDDIKQKFTQSFFLAPQEKGYFVLNDVFRYVDENGIEESDHI----IVSPTST------------DNVSEPPVLEAQVPEQISVTVED-GVGEEVYNPXXXXXXXXXXXXXXXXXXXEIPDDSQMISGLASQIEEVPARAAARI 463
            +AEI +VD QES+GGG IVLVTG++TGKD +++ F+Q+FFLAPQE GYFVLND+FR++DE  +   + I    + +P +T            D V E  V E    +Q  V  +     E+V+ P                   E P + Q +    S+  E+P R+ A I
Sbjct:   64 SAEIATVDTQESHGGGYIVLVTGYLTGKDSVRRTFSQTFFLAPQETGYFVLNDMFRFIDEGTVVHGNQIPVNNVQAPVNTYQDTAAAKEIPDDFVQEKYVQENHAVKQTEVLSKSINEPEKVFTPSEDEQVSAAEEALVTETVNEAPIEVQKVGESDSRTGEIPKRSYASI 234

[Close]

BLAST of CD859189 vs. SwissProt
Match: G3BP_SCHPO (Putative G3BP-like protein OS=Schizosaccharomyces pombe GN=nxt3 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.379e-12
Identity = 40/98 (40.82%), Postives = 56/98 (57.14%), Query Frame = -2

Query:  164 IISVDAQESYGGGVIVLVTGFMTGKDDIKQKFTQSFFLAPQEKGYFVLNDVFRYVDENGIEESDH-IIVSPTSTDNVSEPPVLEAQVPEQISVTVEDG 454
            I +VD+  S  GG+++ V G M+ K  + +KF Q+FFLA Q  GYFVLND+FR++ E+  EE +    V     D  SEP V   Q  E +    E+G
Sbjct:   81 ISNVDSLASSNGGIVIQVLGEMSNKGKLSRKFAQTFFLAEQPNGYFVLNDIFRFLREDVEEEEESPDAVEKEKKDVASEPYVNGVQSQEHLPSAKEEG 178

[Close]

BLAST of CD859189 vs. TAIR peptide
Match: AT3G25150.2 (| Symbols: | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | chr3:9157161-9160052 REVERSE LENGTH=587)

HSP 1 Score: 99.7525 bits (247), Expect = 7.243e-22
Identity = 63/171 (36.84%), Postives = 90/171 (52.63%), Query Frame = -2

Query:    2 NAEIISVDAQESYGGGVIVLVTGFMTGKDDIKQKFTQSFFLAPQEKGYFVLNDVFRYVDENGIEESDHI----IVSPTST------------DNVSEPPVLEAQVPEQISVTVED-GVGEEVYNPXXXXXXXXXXXXXXXXXXXEIPDDSQMISGLASQIEEVPARAAARI 463
            +AEI +VD QES+GGG IVLVTG++TGKD +++ F+Q+FFLAPQE GYFVLND+FR++DE  +   + I    + +P +T            D V E  V E    +Q  V  +     E+V+ P                   E P + Q +    S+  E+P R+ A I
Sbjct:  178 SAEIATVDTQESHGGGYIVLVTGYLTGKDSVRRTFSQTFFLAPQETGYFVLNDMFRFIDEGTVVHGNQIPVNNVQAPVNTYQDTAAAKEIPDDFVQEKYVQENHAVKQTEVLSKSINEPEKVFTPSEDEQVSAAEEALVTETVNEAPIEVQKVGESDSRTGEIPKRSYASI 348

[Close]

BLAST of CD859189 vs. TAIR peptide
Match: AT3G25150.1 (| Symbols: | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | chr3:9157161-9159362 REVERSE LENGTH=488)

HSP 1 Score: 99.7525 bits (247), Expect = 7.243e-22
Identity = 63/171 (36.84%), Postives = 90/171 (52.63%), Query Frame = -2

Query:    2 NAEIISVDAQESYGGGVIVLVTGFMTGKDDIKQKFTQSFFLAPQEKGYFVLNDVFRYVDENGIEESDHI----IVSPTST------------DNVSEPPVLEAQVPEQISVTVED-GVGEEVYNPXXXXXXXXXXXXXXXXXXXEIPDDSQMISGLASQIEEVPARAAARI 463
            +AEI +VD QES+GGG IVLVTG++TGKD +++ F+Q+FFLAPQE GYFVLND+FR++DE  +   + I    + +P +T            D V E  V E    +Q  V  +     E+V+ P                   E P + Q +    S+  E+P R+ A I
Sbjct:   79 SAEIATVDTQESHGGGYIVLVTGYLTGKDSVRRTFSQTFFLAPQETGYFVLNDMFRFIDEGTVVHGNQIPVNNVQAPVNTYQDTAAAKEIPDDFVQEKYVQENHAVKQTEVLSKSINEPEKVFTPSEDEQVSAAEEALVTETVNEAPIEVQKVGESDSRTGEIPKRSYASI 249

[Close]

BLAST of CD859189 vs. TAIR peptide
Match: AT5G60980.2 (| Symbols: | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | chr5:24543988-24546027 FORWARD LENGTH=460)

HSP 1 Score: 92.8189 bits (229), Expect = 8.854e-20
Identity = 53/117 (45.30%), Postives = 74/117 (63.25%), Query Frame = -2

Query:  140 AEIISVDAQESYGGGVIVLVTGFMTGKDDIKQKFTQSFFLAPQEKGYFVLNDVFRYVDENGIEESDHIIVSPTSTDNVSEPPVLEAQV--------PEQISVTVEDGVGE--EVYNP 460
            AEI + DAQES+  GVIVLVTG +TG D++++KF+QSFFLAPQ+KGYFVLNDVFR+++E  +      +    +T +V  P   E  V        PE ++   E+ +    EVY+P
Sbjct:   76 AEIETADAQESHERGVIVLVTGRLTGNDNVRKKFSQSFFLAPQDKGYFVLNDVFRFLEEKEVTAQARSVPINGTTRDVQAPIEPERVVVSHEPEVEPEPVASIEEEDLDNVAEVYDP 192

[Close]

BLAST of CD859189 vs. TAIR peptide
Match: AT5G60980.1 (| Symbols: | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | chr5:24543988-24546027 FORWARD LENGTH=459)

HSP 1 Score: 92.8189 bits (229), Expect = 8.854e-20
Identity = 53/117 (45.30%), Postives = 74/117 (63.25%), Query Frame = -2

Query:  140 AEIISVDAQESYGGGVIVLVTGFMTGKDDIKQKFTQSFFLAPQEKGYFVLNDVFRYVDENGIEESDHIIVSPTSTDNVSEPPVLEAQV--------PEQISVTVEDGVGE--EVYNP 460
            AEI + DAQES+  GVIVLVTG +TG D++++KF+QSFFLAPQ+KGYFVLNDVFR+++E  +      +    +T +V  P   E  V        PE ++   E+ +    EVY+P
Sbjct:   76 AEIETADAQESHERGVIVLVTGRLTGNDNVRKKFSQSFFLAPQDKGYFVLNDVFRFLEEKEVTAQARSVPINGTTRDVQAPIEPERVVVSHEPEVEPEPVASIEEEDLDNVAEVYDP 192

[Close]

BLAST of CD859189 vs. TAIR peptide
Match: AT1G13730.1 (| Symbols: | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | chr1:4710519-4712332 FORWARD LENGTH=428)

HSP 1 Score: 78.9518 bits (193), Expect = 1.323e-15
Identity = 44/104 (42.31%), Postives = 60/104 (57.69%), Query Frame = -2

Query:  176 EIISVDAQESYGGGVIVLVTGFMTGKDDIKQKFTQSFFLAPQEKGYFVLNDVFRYV---------DENGIEESDHIIVSPT-STDNVSEPPVLEAQVPEQISVT 457
            +I++ D+Q SY  GV+ LVTG +T K+  + +F+QSFFL P    YFVLNDVFRYV         ++  +EE    +V PT   D V+EP  +  Q PE    T
Sbjct:   77 QILTADSQASYMNGVVTLVTGLLTVKEGQRMRFSQSFFLVPLNGSYFVLNDVFRYVADEIVEPEANKKEVEEVIPQVVQPTEQVDEVAEPVTIPTQQPEAKQTT 180

[Close]

BLAST of CD859189 vs. TAIR peptide
Match: AT5G48650.1 (| Symbols: | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | chr5:19727279-19729533 FORWARD LENGTH=458)

HSP 1 Score: 78.5666 bits (192), Expect = 1.728e-15
Identity = 44/110 (40.00%), Postives = 67/110 (60.91%), Query Frame = -2

Query:  140 NAEIISVDAQESYGGGVIVLVTGFMTGKDDIKQKFTQSFFLAPQEKGYFVLNDVFRYVDENGIEESDHIIVSP-TSTDNVSEPPVLEA-QVPEQISVTVEDGVGEEVYNP 463
            +AEI S D QES+ GG ++ VTG+ T  +  ++KFTQ+FFLAPQEKG+FVLND+ R+V+++  +     I     S  N + P ++   +  EQ +    + V +EV  P
Sbjct:   77 SAEITSYDTQESHNGGFLLFVTGYFTLNERSRRKFTQTFFLAPQEKGFFVLNDILRFVNDDAKDNVPETIDGEVVSGINSTTPTIINGMKGSEQAACVSVNPVCKEVSKP 186

[Close]

BLAST of CD859189 vs. TAIR peptide
Match: AT2G03640.4 (| Symbols: | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | chr2:1104525-1106418 REVERSE LENGTH=453)

HSP 1 Score: 72.0182 bits (175), Expect = 1.617e-13
Identity = 40/99 (40.40%), Postives = 58/99 (58.59%), Query Frame = -2

Query:  173 EIISVDAQESYGGGVIVLVTGFMTGKDDIKQKFTQSFFLAPQEKGYFVLNDVFRYVDENGIE-ESDHIIVSPTSTDNVSEP---PVLEAQVPEQISVTV 457
            EI++ D+Q +   GV+ LVTG + G D  ++KF+QSFFL  +   YFVLND FRYV +  +E E+   +    ST+ ++EP    V    VP +   TV
Sbjct:   77 EILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQSFFLVSRNGSYFVLNDTFRYVSDEFVEPEATKEVEESQSTNAITEPANESVEAVIVPTEAKTTV 175

[Close]

BLAST of CD859189 vs. TAIR peptide
Match: AT2G03640.1 (| Symbols: | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | chr2:1104525-1106418 REVERSE LENGTH=422)

HSP 1 Score: 72.0182 bits (175), Expect = 1.617e-13
Identity = 40/99 (40.40%), Postives = 58/99 (58.59%), Query Frame = -2

Query:  173 EIISVDAQESYGGGVIVLVTGFMTGKDDIKQKFTQSFFLAPQEKGYFVLNDVFRYVDENGIE-ESDHIIVSPTSTDNVSEP---PVLEAQVPEQISVTV 457
            EI++ D+Q +   GV+ LVTG + G D  ++KF+QSFFL  +   YFVLND FRYV +  +E E+   +    ST+ ++EP    V    VP +   TV
Sbjct:   77 EILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQSFFLVSRNGSYFVLNDTFRYVSDEFVEPEATKEVEESQSTNAITEPANESVEAVIVPTEAKTTV 175

[Close]

BLAST of CD859189 vs. TAIR peptide
Match: AT2G03640.3 (| Symbols: | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | chr2:1104525-1106418 REVERSE LENGTH=454)

HSP 1 Score: 70.8626 bits (172), Expect = 3.603e-13
Identity = 39/100 (39.00%), Postives = 58/100 (58.00%), Query Frame = -2

Query:  173 EIISVDAQESYGGGVIVLVTGFMTGKDDIKQKFTQSFFLAPQEKGYFVLNDVFRYVDENGIE-ESDHIIVSPTSTDNVSEPPVLEAQ----VPEQISVTV 457
            EI++ D+Q +   GV+ LVTG + G D  ++KF+QSFFL  +   YFVLND FRYV +  +E E+   +    ST+ ++  P  E+     VP +   TV
Sbjct:   77 EILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQSFFLVSRNGSYFVLNDTFRYVSDEFVEPEATKEVEESQSTNAITAEPANESVEAVIVPTEAKTTV 176

[Close]

BLAST of CD859189 vs. TAIR peptide
Match: AT2G03640.2 (| Symbols: | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | chr2:1104525-1106418 REVERSE LENGTH=423)

HSP 1 Score: 70.8626 bits (172), Expect = 3.603e-13
Identity = 39/100 (39.00%), Postives = 58/100 (58.00%), Query Frame = -2

Query:  173 EIISVDAQESYGGGVIVLVTGFMTGKDDIKQKFTQSFFLAPQEKGYFVLNDVFRYVDENGIE-ESDHIIVSPTSTDNVSEPPVLEAQ----VPEQISVTV 457
            EI++ D+Q +   GV+ LVTG + G D  ++KF+QSFFL  +   YFVLND FRYV +  +E E+   +    ST+ ++  P  E+     VP +   TV
Sbjct:   77 EILTADSQSTLKNGVVTLVTGLVIGNDGGRRKFSQSFFLVSRNGSYFVLNDTFRYVSDEFVEPEATKEVEESQSTNAITAEPANESVEAVIVPTEAKTTV 176

The following BLAST results are available for this feature:

BLAST of CD859189 vs. TrEMBL
BLAST of CD859189 vs. SwissProt
BLAST of CD859189 vs. TAIR peptide

BLAST of CD859189 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TNY8_SOYBN	7.673e-49	68.83	Putative uncharacterized protein (Fragment) OS=Gly...	[more]
B9GQM2_POPTR	2.033e-25	54.05	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
A5AXU8_VITVI	1.721e-24	44.23	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D7T585_VITVI	2.248e-24	44.23	Whole genome shotgun sequence of line PN40024, sca...	[more]
D7MVS6_ARALY	7.232e-23	40.59	Nuclear transport factor 2 family protein OS=Arabi...	[more]
D7SZ91_VITVI	1.234e-22	53.64	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9T3B3_RICCO	3.039e-21	39.29	RNA binding protein, putative OS=Ricinus communis ...	[more]
B9RLM4_RICCO	3.968e-21	54.37	RNA binding protein, putative OS=Ricinus communis ...	[more]
B8LK80_PICSI	7.484e-20	48.28	Putative uncharacterized protein OS=Picea sitchens...	[more]
Q9LSG2_ARATH	9.775e-20	36.84	RNA-binding protein-like OS=Arabidopsis thaliana P...	[more]

BLAST of CD859189 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 1


Match Name	E-value	Identity	Description
G3BP_SCHPO	2.379e-12	40.82	Putative G3BP-like protein OS=Schizosaccharomyces ...	[more]

BLAST of CD859189 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT3G25150.2	7.243e-22	36.84	\| Symbols: \| Nuclear transport factor 2 (NTF2) fa...	[more]
AT3G25150.1	7.243e-22	36.84	\| Symbols: \| Nuclear transport factor 2 (NTF2) fa...	[more]
AT5G60980.2	8.854e-20	45.30	\| Symbols: \| Nuclear transport factor 2 (NTF2) fa...	[more]
AT5G60980.1	8.854e-20	45.30	\| Symbols: \| Nuclear transport factor 2 (NTF2) fa...	[more]
AT1G13730.1	1.323e-15	42.31	\| Symbols: \| Nuclear transport factor 2 (NTF2) fa...	[more]
AT5G48650.1	1.728e-15	40.00	\| Symbols: \| Nuclear transport factor 2 (NTF2) fa...	[more]
AT2G03640.4	1.617e-13	40.40	\| Symbols: \| Nuclear transport factor 2 (NTF2) fa...	[more]
AT2G03640.1	1.617e-13	40.40	\| Symbols: \| Nuclear transport factor 2 (NTF2) fa...	[more]
AT2G03640.3	3.603e-13	39.00	\| Symbols: \| Nuclear transport factor 2 (NTF2) fa...	[more]
AT2G03640.2	3.603e-13	39.00	\| Symbols: \| Nuclear transport factor 2 (NTF2) fa...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 25..43 score
None	No IPR available	GENE3D	3.10.450.50	no description	coord: 2..61 score: 3.8
None	No IPR available	PANTHER	PTHR10693	RNA-BINDING RAS-GAP SH3 BINDING PROTEIN RELATED	coord: 2..129 score: 1.8
None	No IPR available	SEG	seg	seg	coord: 109..128 score
None	No IPR available	SUPERFAMILY	54427	NTF2-like	coord: 1..62 score: 1.5
IPR002075	Nuclear transport factor 2	PFAM	PF02136	NTF2	coord: 3..57 score: 1.2
IPR018222	Nuclear transport factor 2, Eukaryote	PROFILE	PS50177	NTF2_DOMAIN	coord: 1..57 score: 19

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CD859189 ID=CD859189; Name=CD859189; organism=Pisum sativum; type=EST; length=464bp
CGATCCGAGCGGCCGCCCGGGCAGGTACTTCTTCAATTTGGGATGCCAAT
CCAGATATCATCTGTGAATCATCAGGAATTTCATCAAGAACTTCAGCAAC
AGGAACTTCCTCTTCTTCAACAGACACTTGCTCATTTTCAGGATTGTAGA
CTTCTTCCCCAACACCATCCTCAACAGTCACAGATATTTGCTCTGGAACT
TGCGCCTCTAGCACAGGTGGTTCTGACACATTGTCAGTAGAAGTAGGTGA
TACAATTATATGATCAGACTCTTCTATTCCATTTTCATCAACATATCTGA
AAACATCATTCAAAACAAAGTAGCCTTTCTCTTGAGGAGCAAGGAAGAAA
CTTTGAGTAAATTTCTGTTTAATATCATCCTTTCCCGTCATAAACCCCGT
CACCAAGACAATCACTCCCCCACCATAGGACTCTTGTGCATCCACAGATA
TAATCTCTGCATTC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport

Vocabulary: **INTERPRO**
Term	Definition
IPR002075	NTF2_dom
IPR018222	Nuclear_transport_factor_2_euk

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