CD859031
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CD859031 vs. TrEMBL
Match: C6TKE6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.553e-16 Identity = 49/80 (61.25%), Postives = 51/80 (63.75%), Query Frame = -1 Query: 2 LGMSEMLGTQIKFSGATRXXXXXXXXXSFKTVALFSXXXXXXXXXXXXXXA-NEELAKWYGPDRRIFLPDGLLDRSEIPE 238 LGMSEMLG I SGATR SFKTVALFS N+ELAKWYGPDRRIFLP+GLLDRSEIPE Sbjct: 13 LGMSEMLGNPINLSGATRPAPSASSPASFKTVALFSKKKAAPPKKAAAAAPANDELAKWYGPDRRIFLPEGLLDRSEIPE 92
BLAST of CD859031 vs. TrEMBL
Match: A5B523_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023565 PE=4 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.107e-14 Identity = 45/80 (56.25%), Postives = 52/80 (65.00%), Query Frame = -1 Query: 5 LGMSEMLGTQIKFSGATRXXXXXXXXXSFKTVALFSXXXXXXXXXXXXXXA--NEELAKWYGPDRRIFLPDGLLDRSEIP 238 LG+SEMLG + FSGA+R +FKTVALFS + +EELAKWYGPDRRIFLP+GLLDRSEIP Sbjct: 13 LGVSEMLGNPLNFSGASRTAPSASSPATFKTVALFSKKKAAPAKAKPAPVSPADEELAKWYGPDRRIFLPEGLLDRSEIP 92
BLAST of CD859031 vs. TrEMBL
Match: D7LY42_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_489877 PE=4 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.693e-14 Identity = 44/80 (55.00%), Postives = 50/80 (62.50%), Query Frame = -1 Query: 2 LGMSEMLGTQIKFSGATRXXXXXXXXXS-FKTVALFSXXXXXXXXXXXXXXANEELAKWYGPDRRIFLPDGLLDRSEIPE 238 LG+SEMLGT + F +R + FKTVALFS ++ELAKWYGPDRRIFLPDGLLDRSEIPE Sbjct: 4 LGVSEMLGTPLNFRAVSRSSAPLASSPATFKTVALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPE 83
BLAST of CD859031 vs. TrEMBL
Match: A9PJY2_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.130e-14 Identity = 47/81 (58.02%), Postives = 51/81 (62.96%), Query Frame = -1 Query: 2 LGMSEMLGTQIKFSGATRXXXXXXXXXS-FKTVALFSXXXXXXXXXXXXXXANE-ELAKWYGPDRRIFLPDGLLDRSEIPE 238 LG+SEMLG + FSGATR + FKTVALFS + ELAKWYGPDRRIFLPDGLLDRSEIPE Sbjct: 13 LGVSEMLGNPLNFSGATRSASPAATTPATFKTVALFSKKKAAPKPKPSAVSPADVELAKWYGPDRRIFLPDGLLDRSEIPE 93
BLAST of CD859031 vs. TrEMBL
Match: A9PGZ3_POPTR (Light-harvesting complex II protein Lhcb5 OS=Populus trichocarpa GN=Lhcb5 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.130e-14 Identity = 47/81 (58.02%), Postives = 51/81 (62.96%), Query Frame = -1 Query: 2 LGMSEMLGTQIKFSGATRXXXXXXXXXS-FKTVALFSXXXXXXXXXXXXXXANE-ELAKWYGPDRRIFLPDGLLDRSEIPE 238 LG+SEMLG + FSGATR + FKTVALFS + ELAKWYGPDRRIFLPDGLLDRSEIPE Sbjct: 13 LGVSEMLGNPLNFSGATRSASPAASTPATFKTVALFSKKKPAPKPKPSAVSPADVELAKWYGPDRRIFLPDGLLDRSEIPE 93
BLAST of CD859031 vs. TrEMBL
Match: Q8W537_9FABA (Chl a/b-binding protein (Fragment) OS=Retama raetam PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.006e-14 Identity = 46/86 (53.49%), Postives = 49/86 (56.98%), Query Frame = -1 Query: 5 LGMSEMLGTQIKFSGATRXXXXXXXXXSFKTVALFSXXXXXXXXXXXXXXA--------NEELAKWYGPDRRIFLPDGLLDRSEIP 238 LGMSEMLG I SG TR +FKTVALFS ++ELAKWYGPDRRIFLPDGLLDRSEIP Sbjct: 13 LGMSEMLGNPINLSGVTRLAPSPSNPATFKTVALFSNFNKKKAAPPPKQKPAAAAVSPADDELAKWYGPDRRIFLPDGLLDRSEIP 98
BLAST of CD859031 vs. TrEMBL
Match: Q39286_BRAJU (Chlorophyll a/b-binding protein CP26 in PS II OS=Brassica juncea GN=Lhcb5*Bj1 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 3.042e-13 Identity = 46/81 (56.79%), Postives = 51/81 (62.96%), Query Frame = -1 Query: 2 LGMSEMLGTQIKFSGATRXXXXXXXXXS-FKTVALFSXXXXXXXXXXXXXXA-NEELAKWYGPDRRIFLPDGLLDRSEIPE 238 LG+SEMLGT + F +R + FKTVALFS A N+ELAKWYGPDRRIFLPDGLLDRSEIPE Sbjct: 6 LGVSEMLGTPLNFRAVSRPSAPLASIPATFKTVALFSKKKPAPPPKAKTVSAANDELAKWYGPDRRIFLPDGLLDRSEIPE 86
BLAST of CD859031 vs. TrEMBL
Match: C1K5C9_GOSHI (Chloroplast chlorophyll A-B binding protein OS=Gossypium hirsutum GN=CBP1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.189e-13 Identity = 47/82 (57.32%), Postives = 51/82 (62.20%), Query Frame = -1 Query: 2 LGMSEMLGTQIKFSGATRXXXXXXXXXS-FKTVALFSXXXXXXXXXXXXXXA--NEELAKWYGPDRRIFLPDGLLDRSEIPE 238 LG+SEMLG + FSG R S FKTVALFS A +EELAKWYGPDRRIFLP+GLLDRSEIPE Sbjct: 13 LGVSEMLGNPLNFSGGARSSAPTPSNSSIFKTVALFSKKKAAPPKPKAAAVAPADEELAKWYGPDRRIFLPEGLLDRSEIPE 94
BLAST of CD859031 vs. TrEMBL
Match: B9S1T5_RICCO (Chlorophyll A/B binding protein, putative OS=Ricinus communis GN=RCOM_0868050 PE=4 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.777e-13 Identity = 46/83 (55.42%), Postives = 51/83 (61.45%), Query Frame = -1 Query: 2 LGMSEMLGTQIKFSGATRXXXXXXXXXS-FKTVALFSXXXXXXXXXXXXXXAN---EELAKWYGPDRRIFLPDGLLDRSEIPE 238 LG+SEMLG + FSGATR S KTVALFS + +ELAKWYGPDRRIFLP+GLLDRSEIPE Sbjct: 13 LGVSEMLGNPLNFSGATRSAAPTSSTPSTLKTVALFSKKKAAPPPKAKPAAVSPVDDELAKWYGPDRRIFLPEGLLDRSEIPE 95
BLAST of CD859031 vs. TrEMBL
Match: Q0PWS5_TOBAC (Chloroplast pigment-binding protein CP26 OS=Nicotiana tabacum GN=Lhcb5 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.851e-13 Identity = 46/82 (56.10%), Postives = 51/82 (62.20%), Query Frame = -1 Query: 2 LGMSEMLGTQIKFSGATRXXXXXXXXXS-FKTVALFSXXXXXXXXXXXXXXA--NEELAKWYGPDRRIFLPDGLLDRSEIPE 238 L +SEMLG+ +KFSG R + FKTVALF A +EELAKWYGPDRRIFLPDGLLDRSEIPE Sbjct: 7 LYVSEMLGSPVKFSGVARPAAPTPSSPATFKTVALFKKKAAAAPAKKAVAIAPADEELAKWYGPDRRIFLPDGLLDRSEIPE 88
BLAST of CD859031 vs. SwissProt
Match: CB5_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.270e-15 Identity = 45/80 (56.25%), Postives = 50/80 (62.50%), Query Frame = -1 Query: 2 LGMSEMLGTQIKFSGATRXXXXXXXXXS-FKTVALFSXXXXXXXXXXXXXXANEELAKWYGPDRRIFLPDGLLDRSEIPE 238 LG+SEMLGT + F +R S FKTVALFS ++ELAKWYGPDRRIFLPDGLLDRSEIPE Sbjct: 4 LGVSEMLGTPLNFRAVSRSSAPLASSPSTFKTVALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPE 83
BLAST of CD859031 vs. TAIR peptide
Match: AT4G10340.1 (| Symbols: LHCB5 | light harvesting complex of photosystem II 5 | chr4:6408200-6409496 FORWARD LENGTH=280) HSP 1 Score: 80.8777 bits (198), Expect = 1.791e-16 Identity = 45/80 (56.25%), Postives = 50/80 (62.50%), Query Frame = -1 Query: 2 LGMSEMLGTQIKFSGATRXXXXXXXXXS-FKTVALFSXXXXXXXXXXXXXXANEELAKWYGPDRRIFLPDGLLDRSEIPE 238 LG+SEMLGT + F +R S FKTVALFS ++ELAKWYGPDRRIFLPDGLLDRSEIPE Sbjct: 4 LGVSEMLGTPLNFRAVSRSSAPLASSPSTFKTVALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPE 83 The following BLAST results are available for this feature:
BLAST of CD859031 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of CD859031 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 1
BLAST of CD859031 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CD859031 ID=CD859031; Name=CD859031; organism=Pisum sativum; type=EST; length=307bpback to top |