CD859031

EST Overview
NameCD859031
Unique NameCD859031
TypeEST
OrganismPisum sativum (pea)
Sequence length307
Libraries
Library NameType
LIBEST_013998 CNEcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of CD859031 vs. TrEMBL
Match: C6TKE6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 8.553e-16
Identity = 49/80 (61.25%), Postives = 51/80 (63.75%), Query Frame = -1
Query:    2 LGMSEMLGTQIKFSGATRXXXXXXXXXSFKTVALFSXXXXXXXXXXXXXXA-NEELAKWYGPDRRIFLPDGLLDRSEIPE 238
            LGMSEMLG  I  SGATR         SFKTVALFS                N+ELAKWYGPDRRIFLP+GLLDRSEIPE
Sbjct:   13 LGMSEMLGNPINLSGATRPAPSASSPASFKTVALFSKKKAAPPKKAAAAAPANDELAKWYGPDRRIFLPEGLLDRSEIPE 92          
BLAST of CD859031 vs. TrEMBL
Match: A5B523_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023565 PE=4 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.107e-14
Identity = 45/80 (56.25%), Postives = 52/80 (65.00%), Query Frame = -1
Query:    5 LGMSEMLGTQIKFSGATRXXXXXXXXXSFKTVALFSXXXXXXXXXXXXXXA--NEELAKWYGPDRRIFLPDGLLDRSEIP 238
            LG+SEMLG  + FSGA+R         +FKTVALFS              +  +EELAKWYGPDRRIFLP+GLLDRSEIP
Sbjct:   13 LGVSEMLGNPLNFSGASRTAPSASSPATFKTVALFSKKKAAPAKAKPAPVSPADEELAKWYGPDRRIFLPEGLLDRSEIP 92          
BLAST of CD859031 vs. TrEMBL
Match: D7LY42_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_489877 PE=4 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.693e-14
Identity = 44/80 (55.00%), Postives = 50/80 (62.50%), Query Frame = -1
Query:    2 LGMSEMLGTQIKFSGATRXXXXXXXXXS-FKTVALFSXXXXXXXXXXXXXXANEELAKWYGPDRRIFLPDGLLDRSEIPE 238
            LG+SEMLGT + F   +R         + FKTVALFS               ++ELAKWYGPDRRIFLPDGLLDRSEIPE
Sbjct:    4 LGVSEMLGTPLNFRAVSRSSAPLASSPATFKTVALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPE 83          
BLAST of CD859031 vs. TrEMBL
Match: A9PJY2_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.130e-14
Identity = 47/81 (58.02%), Postives = 51/81 (62.96%), Query Frame = -1
Query:    2 LGMSEMLGTQIKFSGATRXXXXXXXXXS-FKTVALFSXXXXXXXXXXXXXXANE-ELAKWYGPDRRIFLPDGLLDRSEIPE 238
            LG+SEMLG  + FSGATR         + FKTVALFS                + ELAKWYGPDRRIFLPDGLLDRSEIPE
Sbjct:   13 LGVSEMLGNPLNFSGATRSASPAATTPATFKTVALFSKKKAAPKPKPSAVSPADVELAKWYGPDRRIFLPDGLLDRSEIPE 93          
BLAST of CD859031 vs. TrEMBL
Match: A9PGZ3_POPTR (Light-harvesting complex II protein Lhcb5 OS=Populus trichocarpa GN=Lhcb5 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.130e-14
Identity = 47/81 (58.02%), Postives = 51/81 (62.96%), Query Frame = -1
Query:    2 LGMSEMLGTQIKFSGATRXXXXXXXXXS-FKTVALFSXXXXXXXXXXXXXXANE-ELAKWYGPDRRIFLPDGLLDRSEIPE 238
            LG+SEMLG  + FSGATR         + FKTVALFS                + ELAKWYGPDRRIFLPDGLLDRSEIPE
Sbjct:   13 LGVSEMLGNPLNFSGATRSASPAASTPATFKTVALFSKKKPAPKPKPSAVSPADVELAKWYGPDRRIFLPDGLLDRSEIPE 93          
BLAST of CD859031 vs. TrEMBL
Match: Q8W537_9FABA (Chl a/b-binding protein (Fragment) OS=Retama raetam PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.006e-14
Identity = 46/86 (53.49%), Postives = 49/86 (56.98%), Query Frame = -1
Query:    5 LGMSEMLGTQIKFSGATRXXXXXXXXXSFKTVALFSXXXXXXXXXXXXXXA--------NEELAKWYGPDRRIFLPDGLLDRSEIP 238
            LGMSEMLG  I  SG TR         +FKTVALFS                       ++ELAKWYGPDRRIFLPDGLLDRSEIP
Sbjct:   13 LGMSEMLGNPINLSGVTRLAPSPSNPATFKTVALFSNFNKKKAAPPPKQKPAAAAVSPADDELAKWYGPDRRIFLPDGLLDRSEIP 98          
BLAST of CD859031 vs. TrEMBL
Match: Q39286_BRAJU (Chlorophyll a/b-binding protein CP26 in PS II OS=Brassica juncea GN=Lhcb5*Bj1 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 3.042e-13
Identity = 46/81 (56.79%), Postives = 51/81 (62.96%), Query Frame = -1
Query:    2 LGMSEMLGTQIKFSGATRXXXXXXXXXS-FKTVALFSXXXXXXXXXXXXXXA-NEELAKWYGPDRRIFLPDGLLDRSEIPE 238
            LG+SEMLGT + F   +R         + FKTVALFS              A N+ELAKWYGPDRRIFLPDGLLDRSEIPE
Sbjct:    6 LGVSEMLGTPLNFRAVSRPSAPLASIPATFKTVALFSKKKPAPPPKAKTVSAANDELAKWYGPDRRIFLPDGLLDRSEIPE 86          
BLAST of CD859031 vs. TrEMBL
Match: C1K5C9_GOSHI (Chloroplast chlorophyll A-B binding protein OS=Gossypium hirsutum GN=CBP1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.189e-13
Identity = 47/82 (57.32%), Postives = 51/82 (62.20%), Query Frame = -1
Query:    2 LGMSEMLGTQIKFSGATRXXXXXXXXXS-FKTVALFSXXXXXXXXXXXXXXA--NEELAKWYGPDRRIFLPDGLLDRSEIPE 238
            LG+SEMLG  + FSG  R         S FKTVALFS              A  +EELAKWYGPDRRIFLP+GLLDRSEIPE
Sbjct:   13 LGVSEMLGNPLNFSGGARSSAPTPSNSSIFKTVALFSKKKAAPPKPKAAAVAPADEELAKWYGPDRRIFLPEGLLDRSEIPE 94          
BLAST of CD859031 vs. TrEMBL
Match: B9S1T5_RICCO (Chlorophyll A/B binding protein, putative OS=Ricinus communis GN=RCOM_0868050 PE=4 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.777e-13
Identity = 46/83 (55.42%), Postives = 51/83 (61.45%), Query Frame = -1
Query:    2 LGMSEMLGTQIKFSGATRXXXXXXXXXS-FKTVALFSXXXXXXXXXXXXXXAN---EELAKWYGPDRRIFLPDGLLDRSEIPE 238
            LG+SEMLG  + FSGATR         S  KTVALFS               +   +ELAKWYGPDRRIFLP+GLLDRSEIPE
Sbjct:   13 LGVSEMLGNPLNFSGATRSAAPTSSTPSTLKTVALFSKKKAAPPPKAKPAAVSPVDDELAKWYGPDRRIFLPEGLLDRSEIPE 95          
BLAST of CD859031 vs. TrEMBL
Match: Q0PWS5_TOBAC (Chloroplast pigment-binding protein CP26 OS=Nicotiana tabacum GN=Lhcb5 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.851e-13
Identity = 46/82 (56.10%), Postives = 51/82 (62.20%), Query Frame = -1
Query:    2 LGMSEMLGTQIKFSGATRXXXXXXXXXS-FKTVALFSXXXXXXXXXXXXXXA--NEELAKWYGPDRRIFLPDGLLDRSEIPE 238
            L +SEMLG+ +KFSG  R         + FKTVALF               A  +EELAKWYGPDRRIFLPDGLLDRSEIPE
Sbjct:    7 LYVSEMLGSPVKFSGVARPAAPTPSSPATFKTVALFKKKAAAAPAKKAVAIAPADEELAKWYGPDRRIFLPDGLLDRSEIPE 88          
BLAST of CD859031 vs. SwissProt
Match: CB5_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.270e-15
Identity = 45/80 (56.25%), Postives = 50/80 (62.50%), Query Frame = -1
Query:    2 LGMSEMLGTQIKFSGATRXXXXXXXXXS-FKTVALFSXXXXXXXXXXXXXXANEELAKWYGPDRRIFLPDGLLDRSEIPE 238
            LG+SEMLGT + F   +R         S FKTVALFS               ++ELAKWYGPDRRIFLPDGLLDRSEIPE
Sbjct:    4 LGVSEMLGTPLNFRAVSRSSAPLASSPSTFKTVALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPE 83          
BLAST of CD859031 vs. TAIR peptide
Match: AT4G10340.1 (| Symbols: LHCB5 | light harvesting complex of photosystem II 5 | chr4:6408200-6409496 FORWARD LENGTH=280)

HSP 1 Score: 80.8777 bits (198), Expect = 1.791e-16
Identity = 45/80 (56.25%), Postives = 50/80 (62.50%), Query Frame = -1
Query:    2 LGMSEMLGTQIKFSGATRXXXXXXXXXS-FKTVALFSXXXXXXXXXXXXXXANEELAKWYGPDRRIFLPDGLLDRSEIPE 238
            LG+SEMLGT + F   +R         S FKTVALFS               ++ELAKWYGPDRRIFLPDGLLDRSEIPE
Sbjct:    4 LGVSEMLGTPLNFRAVSRSSAPLASSPSTFKTVALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPE 83          
The following BLAST results are available for this feature:
BLAST of CD859031 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TKE6_SOYBN8.553e-1661.25Putative uncharacterized protein OS=Glycine max PE... [more]
A5B523_VITVI2.107e-1456.25Putative uncharacterized protein OS=Vitis vinifera... [more]
D7LY42_ARALY4.693e-1455.00Putative uncharacterized protein OS=Arabidopsis ly... [more]
A9PJY2_9ROSI6.130e-1458.02Putative uncharacterized protein OS=Populus tricho... [more]
A9PGZ3_POPTR6.130e-1458.02Light-harvesting complex II protein Lhcb5 OS=Popul... [more]
Q8W537_9FABA8.006e-1453.49Chl a/b-binding protein (Fragment) OS=Retama raeta... [more]
Q39286_BRAJU3.042e-1356.79Chlorophyll a/b-binding protein CP26 in PS II OS=B... [more]
C1K5C9_GOSHI5.189e-1357.32Chloroplast chlorophyll A-B binding protein OS=Gos... [more]
B9S1T5_RICCO6.777e-1355.42Chlorophyll A/B binding protein, putative OS=Ricin... [more]
Q0PWS5_TOBAC8.851e-1356.10Chloroplast pigment-binding protein CP26 OS=Nicoti... [more]
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BLAST of CD859031 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
CB5_ARATH2.270e-1556.25Chlorophyll a-b binding protein CP26, chloroplasti... [more]
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BLAST of CD859031 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G10340.11.791e-1656.25| Symbols: LHCB5 | light harvesting complex of pho... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 30..49
score
NoneNo IPR availableSEGsegsegcoord: 30..49
score
NoneNo IPR availableSEGsegsegcoord: 29..43
score
NoneNo IPR availableSEGsegsegcoord: 1..25
score: NAcoord: 33..56
score
NoneNo IPR availableSEGsegsegcoord: 13..23
score: NAcoord: 42..51
score: NAcoord: 60..74
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CD859031 ID=CD859031; Name=CD859031; organism=Pisum sativum; type=EST; length=307bp
ACTCGGGAATCTCGGACCTGTCCAAGAGACCATCAGGCAAGAAGATCCTT
CTGTCAGGACCATACCACTTGGCGAGTTCCTCGTTGGCCGGAGCAACCAC
CTTCTGCTTCACCGGAGCCGCCTTCTTCTTCGAAAAAAGAGCAACAGTTT
TAAAGCTAGAACCAGATGAAGAAGAAGGAAGAGACCTTGTTGCACCACTG
AATTTAATTTGAGTTCCAAGCATTTCTGACATTCCAAGTGAAGCAGCTGC
AGTTGAAGCAGCAATGGAAGCCATAGTTTTCAGAATCCACCTCGGCCGCG
ACCACGC
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