EX570761

EST Overview
NameEX570761
Unique NameEX570761
TypeEST
OrganismPisum sativum (pea)
Sequence length412
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of EX570761 vs. TrEMBL
Match: C6TGF7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.458e-8
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 1
Query:    4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93
            QTVVVENPMSVDSSGKLVSNVVVGVTTDKK
Sbjct:  148 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 177          
BLAST of EX570761 vs. TrEMBL
Match: C6T505_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 8.458e-8
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 1
Query:    4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93
            QTVVVENPMSVDSSGKLVSNVVVGVTTDKK
Sbjct:  146 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 175          
BLAST of EX570761 vs. TrEMBL
Match: Q8RXL2_ARATH (Putative zinc-finger protein Lsd1 OS=Arabidopsis thaliana GN=At4g20380 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.461e-7
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1
Query:    4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93
            QTVVVENPMSVD SGKLVSNVVVGVTTDKK
Sbjct:  155 QTVVVENPMSVDESGKLVSNVVVGVTTDKK 184          
BLAST of EX570761 vs. TrEMBL
Match: P94077_ARATH (Zinc-finger protein Lsd1 OS=Arabidopsis thaliana GN=LSD1 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.461e-7
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1
Query:    4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93
            QTVVVENPMSVD SGKLVSNVVVGVTTDKK
Sbjct:  160 QTVVVENPMSVDESGKLVSNVVVGVTTDKK 189          
BLAST of EX570761 vs. TrEMBL
Match: B7FMP5_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.214e-7
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 1
Query:    4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93
            QTVVVENPMSVDSSGKLVS+VVVGVTTDKK
Sbjct:  147 QTVVVENPMSVDSSGKLVSDVVVGVTTDKK 176          
BLAST of EX570761 vs. TrEMBL
Match: D7MIB7_ARALY (Predicted protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_659267 PE=4 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.483e-7
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 1
Query:    4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93
            QTVVVENPMSVD SGKLV+NVVVGVTTDKK
Sbjct:   45 QTVVVENPMSVDESGKLVTNVVVGVTTDKK 74          
BLAST of EX570761 vs. TrEMBL
Match: D7MFJ9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_492829 PE=4 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.483e-7
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 1
Query:    4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93
            QTVVVENPMSVD SGKLV+NVVVGVTTDKK
Sbjct:  155 QTVVVENPMSVDESGKLVTNVVVGVTTDKK 184          
BLAST of EX570761 vs. TrEMBL
Match: B9I0U8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_890563 PE=4 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.160e-7
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 1
Query:    4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93
            QTVVVENPMSVD SGKLVSNVVVGVTT+KK
Sbjct:  150 QTVVVENPMSVDESGKLVSNVVVGVTTEKK 179          
BLAST of EX570761 vs. TrEMBL
Match: B9GIE5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_815833 PE=4 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.160e-7
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 1
Query:    4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93
            QTVVVENPMSVD SGKLVSNVVVGVTT+KK
Sbjct:  145 QTVVVENPMSVDESGKLVSNVVVGVTTEKK 174          
BLAST of EX570761 vs. TrEMBL
Match: Q8W194_BRAOL (Zinc finger protein LSD2 OS=Brassica oleracea GN=LSD2 PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.352e-7
Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 1
Query:    4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93
            QTVVVENPMSV+ SGKLVSNVVVGVTTDKK
Sbjct:  163 QTVVVENPMSVNESGKLVSNVVVGVTTDKK 192          
BLAST of EX570761 vs. TAIR peptide
Match: AT4G20380.8 (| Symbols: LSD1 | LSD1 zinc finger family protein | chr4:11005027-11006438 FORWARD LENGTH=210)

HSP 1 Score: 58.5362 bits (140), Expect = 1.412e-9
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1
Query:    4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93
            QTVVVENPMSVD SGKLVSNVVVGVTTDKK
Sbjct:  181 QTVVVENPMSVDESGKLVSNVVVGVTTDKK 210          
BLAST of EX570761 vs. TAIR peptide
Match: AT4G20380.7 (| Symbols: LSD1 | LSD1 zinc finger family protein | chr4:11005012-11006438 FORWARD LENGTH=189)

HSP 1 Score: 58.5362 bits (140), Expect = 1.412e-9
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1
Query:    4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93
            QTVVVENPMSVD SGKLVSNVVVGVTTDKK
Sbjct:  160 QTVVVENPMSVDESGKLVSNVVVGVTTDKK 189          
BLAST of EX570761 vs. TAIR peptide
Match: AT4G20380.6 (| Symbols: LSD1 | LSD1 zinc finger family protein | chr4:11005027-11006438 FORWARD LENGTH=184)

HSP 1 Score: 58.5362 bits (140), Expect = 1.412e-9
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1
Query:    4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93
            QTVVVENPMSVD SGKLVSNVVVGVTTDKK
Sbjct:  155 QTVVVENPMSVDESGKLVSNVVVGVTTDKK 184          
BLAST of EX570761 vs. TAIR peptide
Match: AT4G20380.5 (| Symbols: LSD1 | LSD1 zinc finger family protein | chr4:11005027-11006438 FORWARD LENGTH=184)

HSP 1 Score: 58.5362 bits (140), Expect = 1.412e-9
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1
Query:    4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93
            QTVVVENPMSVD SGKLVSNVVVGVTTDKK
Sbjct:  155 QTVVVENPMSVDESGKLVSNVVVGVTTDKK 184          
BLAST of EX570761 vs. TAIR peptide
Match: AT4G20380.4 (| Symbols: LSD1 | LSD1 zinc finger family protein | chr4:11005027-11006438 FORWARD LENGTH=184)

HSP 1 Score: 58.5362 bits (140), Expect = 1.412e-9
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1
Query:    4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93
            QTVVVENPMSVD SGKLVSNVVVGVTTDKK
Sbjct:  155 QTVVVENPMSVDESGKLVSNVVVGVTTDKK 184          
BLAST of EX570761 vs. TAIR peptide
Match: AT4G20380.3 (| Symbols: LSD1 | LSD1 zinc finger family protein | chr4:11005027-11006438 FORWARD LENGTH=184)

HSP 1 Score: 58.5362 bits (140), Expect = 1.412e-9
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1
Query:    4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93
            QTVVVENPMSVD SGKLVSNVVVGVTTDKK
Sbjct:  155 QTVVVENPMSVDESGKLVSNVVVGVTTDKK 184          
BLAST of EX570761 vs. TAIR peptide
Match: AT4G20380.1 (| Symbols: LSD1 | LSD1 zinc finger family protein | chr4:11005027-11006438 FORWARD LENGTH=184)

HSP 1 Score: 58.5362 bits (140), Expect = 1.412e-9
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1
Query:    4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93
            QTVVVENPMSVD SGKLVSNVVVGVTTDKK
Sbjct:  155 QTVVVENPMSVDESGKLVSNVVVGVTTDKK 184          
BLAST of EX570761 vs. TAIR peptide
Match: AT4G20380.2 (| Symbols: LSD1 | LSD1 zinc finger family protein | chr4:11005012-11006438 FORWARD LENGTH=189)

HSP 1 Score: 58.5362 bits (140), Expect = 1.412e-9
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1
Query:    4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93
            QTVVVENPMSVD SGKLVSNVVVGVTTDKK
Sbjct:  160 QTVVVENPMSVDESGKLVSNVVVGVTTDKK 189          
The following BLAST results are available for this feature:
BLAST of EX570761 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TGF7_SOYBN8.458e-8100.00Putative uncharacterized protein OS=Glycine max PE... [more]
C6T505_SOYBN8.458e-8100.00Putative uncharacterized protein OS=Glycine max PE... [more]
Q8RXL2_ARATH2.461e-796.67Putative zinc-finger protein Lsd1 OS=Arabidopsis t... [more]
P94077_ARATH2.461e-796.67Zinc-finger protein Lsd1 OS=Arabidopsis thaliana G... [more]
B7FMP5_MEDTR3.214e-796.67Putative uncharacterized protein OS=Medicago trunc... [more]
D7MIB7_ARALY5.483e-793.33Predicted protein (Fragment) OS=Arabidopsis lyrata... [more]
D7MFJ9_ARALY5.483e-793.33Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9I0U8_POPTR7.160e-793.33Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GIE5_POPTR7.160e-793.33Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q8W194_BRAOL9.352e-793.33Zinc finger protein LSD2 OS=Brassica oleracea GN=L... [more]
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BLAST of EX570761 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 8
Match NameE-valueIdentityDescription
AT4G20380.81.412e-996.67| Symbols: LSD1 | LSD1 zinc finger family protein ... [more]
AT4G20380.71.412e-996.67| Symbols: LSD1 | LSD1 zinc finger family protein ... [more]
AT4G20380.61.412e-996.67| Symbols: LSD1 | LSD1 zinc finger family protein ... [more]
AT4G20380.51.412e-996.67| Symbols: LSD1 | LSD1 zinc finger family protein ... [more]
AT4G20380.41.412e-996.67| Symbols: LSD1 | LSD1 zinc finger family protein ... [more]
AT4G20380.31.412e-996.67| Symbols: LSD1 | LSD1 zinc finger family protein ... [more]
AT4G20380.11.412e-996.67| Symbols: LSD1 | LSD1 zinc finger family protein ... [more]
AT4G20380.21.412e-996.67| Symbols: LSD1 | LSD1 zinc finger family protein ... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 56..69
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX570761 ID=EX570761; Name=EX570761; organism=Pisum sativum; type=EST; length=412bp
GGCCAAACTGTGGTGGTAGAAAATCCAATGTCTGTTGATTCGAGTGGAAA
ATTGGTGAGCAATGTTGTTGTCGGCGTTACAACAGATAAGAAATAATGCA
GTCATGTATAGGAGGTACAGTATATGATGCATTATCACAGTTTCTGGCAC
AAGAAGATACTGTATGTGTATGTGTATTTGTATATGTAATATTACATTGC
AGCCTTCATTTTTCGATATATAAGGGTTGGCGGATATCAGTATGTATATG
TATATGAAGAGGACAGGTTGCGAAAAGGGCTGTGTGATTGGTTCATTCTT
GTTGTATCGTGATTTAGCAAGTTGTAGACGAGCAAATGTTATTTCTTTCA
TTCCTTGTTATGCTTGTGATTTTGTTGATGATCTGTTGGGACCATGTATG
AATATTCGATAC
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