EX570761
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EX570761 vs. TrEMBL
Match: C6TGF7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 8.458e-8 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 1 Query: 4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK Sbjct: 148 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 177
BLAST of EX570761 vs. TrEMBL
Match: C6T505_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 8.458e-8 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 1 Query: 4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK Sbjct: 146 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 175
BLAST of EX570761 vs. TrEMBL
Match: Q8RXL2_ARATH (Putative zinc-finger protein Lsd1 OS=Arabidopsis thaliana GN=At4g20380 PE=2 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 2.461e-7 Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1 Query: 4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93 QTVVVENPMSVD SGKLVSNVVVGVTTDKK Sbjct: 155 QTVVVENPMSVDESGKLVSNVVVGVTTDKK 184
BLAST of EX570761 vs. TrEMBL
Match: P94077_ARATH (Zinc-finger protein Lsd1 OS=Arabidopsis thaliana GN=LSD1 PE=2 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 2.461e-7 Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1 Query: 4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93 QTVVVENPMSVD SGKLVSNVVVGVTTDKK Sbjct: 160 QTVVVENPMSVDESGKLVSNVVVGVTTDKK 189
BLAST of EX570761 vs. TrEMBL
Match: B7FMP5_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 3.214e-7 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 1 Query: 4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93 QTVVVENPMSVDSSGKLVS+VVVGVTTDKK Sbjct: 147 QTVVVENPMSVDSSGKLVSDVVVGVTTDKK 176
BLAST of EX570761 vs. TrEMBL
Match: D7MIB7_ARALY (Predicted protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_659267 PE=4 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 5.483e-7 Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 1 Query: 4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93 QTVVVENPMSVD SGKLV+NVVVGVTTDKK Sbjct: 45 QTVVVENPMSVDESGKLVTNVVVGVTTDKK 74
BLAST of EX570761 vs. TrEMBL
Match: D7MFJ9_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_492829 PE=4 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 5.483e-7 Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 1 Query: 4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93 QTVVVENPMSVD SGKLV+NVVVGVTTDKK Sbjct: 155 QTVVVENPMSVDESGKLVTNVVVGVTTDKK 184
BLAST of EX570761 vs. TrEMBL
Match: B9I0U8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_890563 PE=4 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 7.160e-7 Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 1 Query: 4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93 QTVVVENPMSVD SGKLVSNVVVGVTT+KK Sbjct: 150 QTVVVENPMSVDESGKLVSNVVVGVTTEKK 179
BLAST of EX570761 vs. TrEMBL
Match: B9GIE5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_815833 PE=4 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 7.160e-7 Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 1 Query: 4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93 QTVVVENPMSVD SGKLVSNVVVGVTT+KK Sbjct: 145 QTVVVENPMSVDESGKLVSNVVVGVTTEKK 174
BLAST of EX570761 vs. TrEMBL
Match: Q8W194_BRAOL (Zinc finger protein LSD2 OS=Brassica oleracea GN=LSD2 PE=2 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 9.352e-7 Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 1 Query: 4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93 QTVVVENPMSV+ SGKLVSNVVVGVTTDKK Sbjct: 163 QTVVVENPMSVNESGKLVSNVVVGVTTDKK 192
BLAST of EX570761 vs. TAIR peptide
Match: AT4G20380.8 (| Symbols: LSD1 | LSD1 zinc finger family protein | chr4:11005027-11006438 FORWARD LENGTH=210) HSP 1 Score: 58.5362 bits (140), Expect = 1.412e-9 Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1 Query: 4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93 QTVVVENPMSVD SGKLVSNVVVGVTTDKK Sbjct: 181 QTVVVENPMSVDESGKLVSNVVVGVTTDKK 210
BLAST of EX570761 vs. TAIR peptide
Match: AT4G20380.7 (| Symbols: LSD1 | LSD1 zinc finger family protein | chr4:11005012-11006438 FORWARD LENGTH=189) HSP 1 Score: 58.5362 bits (140), Expect = 1.412e-9 Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1 Query: 4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93 QTVVVENPMSVD SGKLVSNVVVGVTTDKK Sbjct: 160 QTVVVENPMSVDESGKLVSNVVVGVTTDKK 189
BLAST of EX570761 vs. TAIR peptide
Match: AT4G20380.6 (| Symbols: LSD1 | LSD1 zinc finger family protein | chr4:11005027-11006438 FORWARD LENGTH=184) HSP 1 Score: 58.5362 bits (140), Expect = 1.412e-9 Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1 Query: 4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93 QTVVVENPMSVD SGKLVSNVVVGVTTDKK Sbjct: 155 QTVVVENPMSVDESGKLVSNVVVGVTTDKK 184
BLAST of EX570761 vs. TAIR peptide
Match: AT4G20380.5 (| Symbols: LSD1 | LSD1 zinc finger family protein | chr4:11005027-11006438 FORWARD LENGTH=184) HSP 1 Score: 58.5362 bits (140), Expect = 1.412e-9 Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1 Query: 4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93 QTVVVENPMSVD SGKLVSNVVVGVTTDKK Sbjct: 155 QTVVVENPMSVDESGKLVSNVVVGVTTDKK 184
BLAST of EX570761 vs. TAIR peptide
Match: AT4G20380.4 (| Symbols: LSD1 | LSD1 zinc finger family protein | chr4:11005027-11006438 FORWARD LENGTH=184) HSP 1 Score: 58.5362 bits (140), Expect = 1.412e-9 Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1 Query: 4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93 QTVVVENPMSVD SGKLVSNVVVGVTTDKK Sbjct: 155 QTVVVENPMSVDESGKLVSNVVVGVTTDKK 184
BLAST of EX570761 vs. TAIR peptide
Match: AT4G20380.3 (| Symbols: LSD1 | LSD1 zinc finger family protein | chr4:11005027-11006438 FORWARD LENGTH=184) HSP 1 Score: 58.5362 bits (140), Expect = 1.412e-9 Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1 Query: 4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93 QTVVVENPMSVD SGKLVSNVVVGVTTDKK Sbjct: 155 QTVVVENPMSVDESGKLVSNVVVGVTTDKK 184
BLAST of EX570761 vs. TAIR peptide
Match: AT4G20380.1 (| Symbols: LSD1 | LSD1 zinc finger family protein | chr4:11005027-11006438 FORWARD LENGTH=184) HSP 1 Score: 58.5362 bits (140), Expect = 1.412e-9 Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1 Query: 4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93 QTVVVENPMSVD SGKLVSNVVVGVTTDKK Sbjct: 155 QTVVVENPMSVDESGKLVSNVVVGVTTDKK 184
BLAST of EX570761 vs. TAIR peptide
Match: AT4G20380.2 (| Symbols: LSD1 | LSD1 zinc finger family protein | chr4:11005012-11006438 FORWARD LENGTH=189) HSP 1 Score: 58.5362 bits (140), Expect = 1.412e-9 Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1 Query: 4 QTVVVENPMSVDSSGKLVSNVVVGVTTDKK 93 QTVVVENPMSVD SGKLVSNVVVGVTTDKK Sbjct: 160 QTVVVENPMSVDESGKLVSNVVVGVTTDKK 189 The following BLAST results are available for this feature:
BLAST of EX570761 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of EX570761 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 8
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EX570761 ID=EX570761; Name=EX570761; organism=Pisum sativum; type=EST; length=412bpback to top |