AM162104

EST Overview


Name	AM162104
Unique Name	AM162104
Type	EST
Organism	Pisum sativum (pea)
Sequence length	433

Libraries


Library Name	Type
LIBEST_019360 Pisum sativum leaf vegetative	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of AM162104 vs. TrEMBL
Match: B7FH68_MEDTR (Histone H2B OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.338e-37
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   48 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 128

[Close]

BLAST of AM162104 vs. TrEMBL
Match: Q2XPW1_SOLTU (Histone H2B OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.747e-37
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   56 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 136

[Close]

BLAST of AM162104 vs. TrEMBL
Match: D7SKK3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025021001 PE=4 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.747e-37
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   27 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 107

[Close]

BLAST of AM162104 vs. TrEMBL
Match: C6T1C4_SOYBN (Histone H2B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.747e-37
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   48 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 128

[Close]

BLAST of AM162104 vs. TrEMBL
Match: C6SWY5_SOYBN (Histone H2B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.747e-37
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   58 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 138

[Close]

BLAST of AM162104 vs. TrEMBL
Match: C6SWE9_SOYBN (Histone H2B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.747e-37
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   47 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 127

[Close]

BLAST of AM162104 vs. TrEMBL
Match: B9T761_RICCO (Histone H2B OS=Ricinus communis GN=RCOM_0272700 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.747e-37
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   45 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 125

[Close]

BLAST of AM162104 vs. TrEMBL
Match: B9T302_RICCO (Histone H2B OS=Ricinus communis GN=RCOM_0350190 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.747e-37
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   51 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 131

[Close]

BLAST of AM162104 vs. TrEMBL
Match: B9T301_RICCO (Histone H2B OS=Ricinus communis GN=RCOM_0350180 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.747e-37
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   51 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 131

[Close]

BLAST of AM162104 vs. TrEMBL
Match: B9HUW2_POPTR (Histone H2B (Fragment) OS=Populus trichocarpa GN=HTB902 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.747e-37
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:    3 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 83

[Close]

BLAST of AM162104 vs. SwissProt
Match: H2B3_MEDTR (Probable histone H2B.3 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 159.073 bits (401), Expect = 7.042e-39
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   48 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 128

[Close]

BLAST of AM162104 vs. SwissProt
Match: H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 158.688 bits (400), Expect = 9.197e-39
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   58 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 138

[Close]

BLAST of AM162104 vs. SwissProt
Match: H2B_GOSHI (Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV=3)

HSP 1 Score: 157.532 bits (397), Expect = 2.049e-38
Identity = 79/81 (97.53%), Postives = 81/81 (100.00%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   57 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 137

[Close]

BLAST of AM162104 vs. SwissProt
Match: H2B3_SOLLC (Histone H2B.3 (Fragment) OS=Solanum lycopersicum GN=H2B-3 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 2.049e-38
Identity = 79/81 (97.53%), Postives = 81/81 (100.00%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   47 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 127

[Close]

BLAST of AM162104 vs. SwissProt
Match: H2B1_ARATH (Histone H2B.1 OS=Arabidopsis thaliana GN=At1g07790 PE=1 SV=3)

HSP 1 Score: 157.532 bits (397), Expect = 2.049e-38
Identity = 79/81 (97.53%), Postives = 81/81 (100.00%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   58 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 138

[Close]

BLAST of AM162104 vs. SwissProt
Match: H2B_CAPAN (Histone H2B OS=Capsicum annuum GN=HIS2B PE=2 SV=3)

HSP 1 Score: 157.147 bits (396), Expect = 2.676e-38
Identity = 78/81 (96.30%), Postives = 81/81 (100.00%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            +ETYKIYIFKVLKQVHPDIG+SSK+MGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   55 IETYKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 135

[Close]

BLAST of AM162104 vs. SwissProt
Match: H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 156.377 bits (394), Expect = 4.564e-38
Identity = 78/81 (96.30%), Postives = 81/81 (100.00%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   60 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 140

[Close]

BLAST of AM162104 vs. SwissProt
Match: H2B9_ARATH (Histone H2B.9 OS=Arabidopsis thaliana GN=At5g02570 PE=1 SV=3)

HSP 1 Score: 155.606 bits (392), Expect = 7.786e-38
Identity = 78/80 (97.50%), Postives = 79/80 (98.75%), Query Frame = -2

Query:    1 ETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 240
            ETYKIYIFKVLKQVHPDIG+S KAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   43 ETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 122

[Close]

BLAST of AM162104 vs. SwissProt
Match: H2B8_ARATH (Histone H2B.8 OS=Arabidopsis thaliana GN=At3g53650 PE=1 SV=3)

HSP 1 Score: 155.606 bits (392), Expect = 7.786e-38
Identity = 77/81 (95.06%), Postives = 80/81 (98.77%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            +ETYKIYIFKVLKQVHPDIG+S KAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGEL+KHAVSEG
Sbjct:   48 IETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELSKHAVSEG 128

[Close]

BLAST of AM162104 vs. SwissProt
Match: H2B7_ARATH (Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030 PE=1 SV=3)

HSP 1 Score: 155.606 bits (392), Expect = 7.786e-38
Identity = 78/81 (96.30%), Postives = 80/81 (98.77%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   55 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 135

[Close]

BLAST of AM162104 vs. TAIR peptide
Match: AT1G07790.1 (| Symbols: HTB1 | Histone superfamily protein | chr1:2413049-2413495 FORWARD LENGTH=148)

HSP 1 Score: 157.532 bits (397), Expect = 2.510e-39
Identity = 79/81 (97.53%), Postives = 81/81 (100.00%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   58 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 138

[Close]

BLAST of AM162104 vs. TAIR peptide
Match: AT5G59910.1 (| Symbols: HTB4 | Histone superfamily protein | chr5:24127206-24127658 FORWARD LENGTH=150)

HSP 1 Score: 156.377 bits (394), Expect = 5.592e-39
Identity = 78/81 (96.30%), Postives = 81/81 (100.00%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   60 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 140

[Close]

BLAST of AM162104 vs. TAIR peptide
Match: AT5G02570.1 (| Symbols: | Histone superfamily protein | chr5:576742-577140 REVERSE LENGTH=132)

HSP 1 Score: 155.606 bits (392), Expect = 9.538e-39
Identity = 78/80 (97.50%), Postives = 79/80 (98.75%), Query Frame = -2

Query:    1 ETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 240
            ETYKIYIFKVLKQVHPDIG+S KAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   43 ETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 122

[Close]

BLAST of AM162104 vs. TAIR peptide
Match: AT3G53650.1 (| Symbols: | Histone superfamily protein | chr3:19889358-19889774 FORWARD LENGTH=138)

HSP 1 Score: 155.606 bits (392), Expect = 9.538e-39
Identity = 77/81 (95.06%), Postives = 80/81 (98.77%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            +ETYKIYIFKVLKQVHPDIG+S KAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGEL+KHAVSEG
Sbjct:   48 IETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELSKHAVSEG 128

[Close]

BLAST of AM162104 vs. TAIR peptide
Match: AT3G45980.1 (| Symbols: H2B, HTB9 | Histone superfamily protein | chr3:16897492-16897944 REVERSE LENGTH=150)

HSP 1 Score: 155.606 bits (392), Expect = 9.538e-39
Identity = 78/81 (96.30%), Postives = 80/81 (98.77%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   60 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 140

[Close]

BLAST of AM162104 vs. TAIR peptide
Match: AT3G46030.1 (| Symbols: HTB11 | Histone superfamily protein | chr3:16913614-16914051 REVERSE LENGTH=145)

HSP 1 Score: 155.606 bits (392), Expect = 9.538e-39
Identity = 78/81 (96.30%), Postives = 80/81 (98.77%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   55 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 135

[Close]

BLAST of AM162104 vs. TAIR peptide
Match: AT2G37470.1 (| Symbols: | Histone superfamily protein | chr2:15736832-15737248 FORWARD LENGTH=138)

HSP 1 Score: 155.606 bits (392), Expect = 9.538e-39
Identity = 77/81 (95.06%), Postives = 80/81 (98.77%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPD+G+S KAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   49 VETYKIYIFKVLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 129

[Close]

BLAST of AM162104 vs. TAIR peptide
Match: AT5G22880.1 (| Symbols: H2B, HTB2 | histone B2 | chr5:7652130-7652567 REVERSE LENGTH=145)

HSP 1 Score: 154.836 bits (390), Expect = 1.627e-38
Identity = 78/81 (96.30%), Postives = 80/81 (98.77%), Query Frame = -2

Query:    1 VETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 243
            VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   55 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 135

[Close]

BLAST of AM162104 vs. TAIR peptide
Match: AT2G28720.1 (| Symbols: | Histone superfamily protein | chr2:12327043-12327498 FORWARD LENGTH=151)

HSP 1 Score: 154.836 bits (390), Expect = 1.627e-38
Identity = 77/80 (96.25%), Postives = 80/80 (100.00%), Query Frame = -2

Query:    1 ETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 240
            ETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   62 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 141

[Close]

BLAST of AM162104 vs. TAIR peptide
Match: AT3G09480.1 (| Symbols: | Histone superfamily protein | chr3:2914890-2915270 REVERSE LENGTH=126)

HSP 1 Score: 149.443 bits (376), Expect = 6.835e-37
Identity = 74/80 (92.50%), Postives = 77/80 (96.25%), Query Frame = -2

Query:    1 ETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 240
            ETYKIY+FKVLKQVHPDIG+S KAMGIMNSFIND FEK+A ESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG
Sbjct:   37 ETYKIYLFKVLKQVHPDIGISGKAMGIMNSFINDTFEKIALESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEG 116

The following BLAST results are available for this feature:

BLAST of AM162104 vs. TrEMBL
BLAST of AM162104 vs. SwissProt
BLAST of AM162104 vs. TAIR peptide

BLAST of AM162104 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FH68_MEDTR	1.338e-37	100.00	Histone H2B OS=Medicago truncatula PE=2 SV=1	[more]
Q2XPW1_SOLTU	1.747e-37	98.77	Histone H2B OS=Solanum tuberosum PE=2 SV=1	[more]
D7SKK3_VITVI	1.747e-37	98.77	Whole genome shotgun sequence of line PN40024, sca...	[more]
C6T1C4_SOYBN	1.747e-37	98.77	Histone H2B OS=Glycine max PE=2 SV=1	[more]
C6SWY5_SOYBN	1.747e-37	98.77	Histone H2B OS=Glycine max PE=2 SV=1	[more]
C6SWE9_SOYBN	1.747e-37	98.77	Histone H2B OS=Glycine max PE=2 SV=1	[more]
B9T761_RICCO	1.747e-37	98.77	Histone H2B OS=Ricinus communis GN=RCOM_0272700 PE...	[more]
B9T302_RICCO	1.747e-37	98.77	Histone H2B OS=Ricinus communis GN=RCOM_0350190 PE...	[more]
B9T301_RICCO	1.747e-37	98.77	Histone H2B OS=Ricinus communis GN=RCOM_0350180 PE...	[more]
B9HUW2_POPTR	1.747e-37	98.77	Histone H2B (Fragment) OS=Populus trichocarpa GN=H...	[more]

BLAST of AM162104 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
H2B3_MEDTR	7.042e-39	100.00	Probable histone H2B.3 OS=Medicago truncatula PE=3...	[more]
H2B1_MEDTR	9.197e-39	98.77	Probable histone H2B.1 OS=Medicago truncatula PE=3...	[more]
H2B_GOSHI	2.049e-38	97.53	Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV...	[more]
H2B3_SOLLC	2.049e-38	97.53	Histone H2B.3 (Fragment) OS=Solanum lycopersicum G...	[more]
H2B1_ARATH	2.049e-38	97.53	Histone H2B.1 OS=Arabidopsis thaliana GN=At1g07790...	[more]
H2B_CAPAN	2.676e-38	96.30	Histone H2B OS=Capsicum annuum GN=HIS2B PE=2 SV=3	[more]
H2B11_ARATH	4.564e-38	96.30	Histone H2B.11 OS=Arabidopsis thaliana GN=At5g5991...	[more]
H2B9_ARATH	7.786e-38	97.50	Histone H2B.9 OS=Arabidopsis thaliana GN=At5g02570...	[more]
H2B8_ARATH	7.786e-38	95.06	Histone H2B.8 OS=Arabidopsis thaliana GN=At3g53650...	[more]
H2B7_ARATH	7.786e-38	96.30	Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030...	[more]

BLAST of AM162104 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT1G07790.1	2.510e-39	97.53	\| Symbols: HTB1 \| Histone superfamily protein \| ch...	[more]
AT5G59910.1	5.592e-39	96.30	\| Symbols: HTB4 \| Histone superfamily protein \| ch...	[more]
AT5G02570.1	9.538e-39	97.50	\| Symbols: \| Histone superfamily protein \| chr5:5...	[more]
AT3G53650.1	9.538e-39	95.06	\| Symbols: \| Histone superfamily protein \| chr3:1...	[more]
AT3G45980.1	9.538e-39	96.30	\| Symbols: H2B, HTB9 \| Histone superfamily protein...	[more]
AT3G46030.1	9.538e-39	96.30	\| Symbols: HTB11 \| Histone superfamily protein \| c...	[more]
AT2G37470.1	9.538e-39	95.06	\| Symbols: \| Histone superfamily protein \| chr2:1...	[more]
AT5G22880.1	1.627e-38	96.30	\| Symbols: H2B, HTB2 \| histone B2 \| chr5:7652130-7...	[more]
AT2G28720.1	1.627e-38	96.25	\| Symbols: \| Histone superfamily protein \| chr2:1...	[more]
AT3G09480.1	6.835e-37	92.50	\| Symbols: \| Histone superfamily protein \| chr3:2...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 34..86 score
None	No IPR available	SEG	seg	seg	coord: 2..50 score
None	No IPR available	SEG	seg	seg	coord: 20..63 score
None	No IPR available	SEG	seg	seg	coord: 9..60 score
IPR000558	Histone H2B	PRINTS	PR00621	HISTONEH2B	coord: 67..85 score: 2.4e-44coord: 86..106 score: 2.4e-44coord: 108..125 score: 2.4e-44coord: 125..138 score: 2.4e-44coord: 138..144 score: 2.4
IPR000558	Histone H2B	PANTHER	PTHR23428	HISTONE H2B	coord: 18..144 score: 2
IPR000558	Histone H2B	SMART	SM00427	no description	coord: 57..144 score: 1.3
IPR000558	Histone H2B	PROSITE	PS00357	HISTONE_H2B	coord: 122..144 score
IPR007125	Histone core	PFAM	PF00125	Histone	coord: 63..130 score: 9.6
IPR009072	Histone-fold	GENE3D	1.10.20.10	no description	coord: 36..144 score: 3.9
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 34..144 score: 2.5

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>AM162104 ID=AM162104; Name=AM162104; organism=Pisum sativum; type=EST; length=433bp
ACCCTCGGAGACGGCGTGTTTGGCCAATTCACCGGGAAGAACCAATCTAA
CGGCGGTTTGAATCTCCCGTGAAGTAATAGTTGGCTTCTTGTTATACCTA
GCCAAACGAGAGGATTCTTGAGCTAGTTTCTCGAAGATGTCGTTGATGAA
ACTATTCATGATTCCCATAGCCTTGCTGGAGACACCAATATCAGGATGAA
CCTGTTTCAAAACCTTGAAGATGTAGATCTTGTAGGTCTCAACGCTCTTC
TTGGATTTCTTCTTCTTCTTGTCGCTTCCTCCTTCCTTCGAGATCTTCTT
CTCGGCCTTAGGTTTCTTCTCTGCAGGGGATTTCTCTGCTGCGGGTTTCT
TCTCTGCTGGCTTCTTCTCGGCCTTTGTTGGGGCCATTGATGGTTTGTGG
TGAAAAACTAAAGAGAGGTGATTGCAATATTGC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0000786	nucleosome
GO:0005634	nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006334	nucleosome assembly

Vocabulary: **INTERPRO**
Term	Definition
IPR000558	Histone_H2B
IPR007125	Histone_H2A/H2B/H3
IPR009072	Histone-fold

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