CD859216

EST Overview


Name	CD859216
Unique Name	CD859216
Type	EST
Organism	Pisum sativum (pea)
Sequence length	544

Libraries


Library Name	Type
LIBEST_013999 CNI	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of CD859216 vs. TrEMBL
Match: B9GSQ9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_710215 PE=4 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 3.825e-61
Identity = 123/185 (66.49%), Postives = 145/185 (78.38%), Query Frame = -1

Query:    2 SEDTELKSALSNKVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGMAPMMHPGFQHYMTQMSMSMPTRSFPPLP---NPLQLPRTQF-DPSVSTSQTPNPTLTCQNPLFGVFNYQNQMQNPALSEQYARYMNYHLMQNASQPMN 544
            SED EL SA++NK ++RSGS RR+RAAEVHNLSERRRRDRINEKM+ALQ+LIPH +KTDKASML+EAIEYLKSLQLQLQVMWMGSG+ P+M PG QH+M++M M M     PPLP   NP+ LPR    D S+S + T N  + CQ P+    NYQNQMQNP  S+QYAR+M +H MQ ASQPMN
Sbjct:   10 SEDAELDSAVANKPAKRSGSTRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASMLDEAIEYLKSLQLQLQVMWMGSGIVPVMFPGVQHFMSRMGMGMGMGP-PPLPSMQNPMHLPRVPLVDQSISMTPTQNQAVICQTPVLNPVNYQNQMQNPTFSDQYARFMGFH-MQAASQPMN 192

[Close]

BLAST of CD859216 vs. TrEMBL
Match: B9H863_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_651728 PE=4 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.351e-57
Identity = 114/180 (63.33%), Postives = 137/180 (76.11%), Query Frame = -1

Query:    2 DTELKSALSNKVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGMAPMMHPGFQHYMTQMSMSMPTRSFPPLPNPLQLPRTQ-FDPSVSTSQTPNPTLTCQNPLFGVFNYQNQMQNPALSEQYARYMNYHLMQNASQPMN 538
            + +L S   N  ++RSGS RR+RAAEVHNLSERRRRDRINEKM+ALQ+LIPH  KTDKASML+EAIEYLKSLQLQLQVMWMG GMAPM+ PG QH+M++M M  P    P + NP+ LPR Q  D S+S + T N  + CQ P+    N+ NQMQNPA ++QYAR+M +H MQ ASQPMN
Sbjct:  164 ELDLDSMAGNNPTKRSGSTRRSRAAEVHNLSERRRRDRINEKMRALQELIPHCYKTDKASMLDEAIEYLKSLQLQLQVMWMGGGMAPMLFPGVQHFMSRMGMGPP---LPSMQNPMHLPRVQLIDQSISMAPTQNSGVMCQAPVLNPVNFHNQMQNPAFADQYARFMGFH-MQAASQPMN 339

[Close]

BLAST of CD859216 vs. TrEMBL
Match: D7LJW8_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483401 PE=4 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 8.860e-42
Identity = 100/182 (54.95%), Postives = 122/182 (67.03%), Query Frame = -1

Query:    5 EDTELKSALSNKVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGM--APMMHPGFQHYMTQMSMSMPTRSFPPLPNPLQLPRTQFDPSVSTSQTPNPTLTCQNPLFGVFNYQNQMQNPALSEQYARYM-NYHLMQNASQPM 541
            +   L   + NK +QRSGS RR+RAAEVHNLSERRRRDRINE+MKALQ+LIPH SKTDKAS+L+EAI+YLKSLQLQLQVMWMGSGM  APMM PG Q          P      + +P+QLPR  F     ++   NP L CQNP+          QN  +S+++ARY+  +  MQ A+QPM
Sbjct:  233 DSVSLSDVIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVMWMGSGMAAAPMMFPGVQ----------PPPFIRQMQSPVQLPR--FPVMERSAIQNNPGLVCQNPI----------QNQIISDRFARYIGGFPQMQAAAQPM 392

[Close]

BLAST of CD859216 vs. TrEMBL
Match: D5JZM7_ARATH (Phytochrome interacting factor 4 OS=Arabidopsis thaliana GN=PIF4 PE=4 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 7.500e-41
Identity = 100/184 (54.35%), Postives = 122/184 (66.30%), Query Frame = -1

Query:   11 EDTELKSALSNKVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGM------APMMHPGFQHYMTQMSMSMPTRSFPPLPNPLQLPRTQFDPSVSTSQTPNPTLTCQNPLFGVFNYQNQMQNPALSEQYARYM-NYHLMQNASQ 541
            E   L  A+ NK +QRSGS RR+RAAEVHNLSERRRRDRINE+MKALQ+LIPH SKTDKAS+L+EAI+YLKSLQLQLQVMWMGSGM      APMM PG Q          P +    + +P+QLPR  F     ++   NP L CQNP          +QN  +S+++ARY+  +  MQ A+Q
Sbjct:  234 ESVSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVMWMGSGMAAAAASAPMMFPGVQ----------PQQFIRQIQSPVQLPR--FPVMDQSAIQNNPGLVCQNP----------VQNQIISDRFARYIGGFPHMQAATQ 395

[Close]

BLAST of CD859216 vs. TrEMBL
Match: B9DHW1_ARATH (AT2G43010 protein (Fragment) OS=Arabidopsis thaliana GN=AT2G43010 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 7.500e-41
Identity = 100/184 (54.35%), Postives = 122/184 (66.30%), Query Frame = -1

Query:   11 EDTELKSALSNKVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGM------APMMHPGFQHYMTQMSMSMPTRSFPPLPNPLQLPRTQFDPSVSTSQTPNPTLTCQNPLFGVFNYQNQMQNPALSEQYARYM-NYHLMQNASQ 541
            E   L  A+ NK +QRSGS RR+RAAEVHNLSERRRRDRINE+MKALQ+LIPH SKTDKAS+L+EAI+YLKSLQLQLQVMWMGSGM      APMM PG Q          P +    + +P+QLPR  F     ++   NP L CQNP          +QN  +S+++ARY+  +  MQ A+Q
Sbjct:  213 ESVSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVMWMGSGMAAAAASAPMMFPGVQ----------PQQFIRQIQSPVQLPR--FPVMDQSAIQNNPGLVCQNP----------VQNQIISDRFARYIGGFPHMQAATQ 374

[Close]

BLAST of CD859216 vs. TrEMBL
Match: B9DFT8_ARATH (AT2G43010 protein OS=Arabidopsis thaliana GN=PIF4 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 7.500e-41
Identity = 100/184 (54.35%), Postives = 122/184 (66.30%), Query Frame = -1

Query:   11 EDTELKSALSNKVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGM------APMMHPGFQHYMTQMSMSMPTRSFPPLPNPLQLPRTQFDPSVSTSQTPNPTLTCQNPLFGVFNYQNQMQNPALSEQYARYM-NYHLMQNASQ 541
            E   L  A+ NK +QRSGS RR+RAAEVHNLSERRRRDRINE+MKALQ+LIPH SKTDKAS+L+EAI+YLKSLQLQLQVMWMGSGM      APMM PG Q          P +    + +P+QLPR  F     ++   NP L CQNP          +QN  +S+++ARY+  +  MQ A+Q
Sbjct:  234 ESVSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVMWMGSGMAAAAASAPMMFPGVQ----------PQQFIRQIQSPVQLPR--FPVMDQSAIQNNPGLVCQNP----------VQNQIISDRFARYIGGFPHMQAATQ 395

[Close]

BLAST of CD859216 vs. TrEMBL
Match: D7LWA2_ARALY (Phytochrome-interacting factor 5 OS=Arabidopsis lyrata subsp. lyrata GN=PIL6 PE=4 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.279e-40
Identity = 100/170 (58.82%), Postives = 117/170 (68.82%), Query Frame = -1

Query:   41 ALSNKVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGMA--------PMMHPGFQH--YMTQMSMSMPTRSFPPLPNPLQLPRTQFDPSVSTSQTPNPTLTCQNPLFGVFNYQNQMQNPALSEQYARYM 520
            A+ NK SQRSGS RR+RAAEVHNLSERRRRDRINE+MKALQ+LIPH SKTDKAS+L+EAI+YLKSLQ+QLQVMWMGSGMA        PMM PG Q   Y+ QM+M           + +QLP  QF     ++   +P L CQ P+     +Q Q QN  LSEQ ARYM
Sbjct:  238 AMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQMQLQVMWMGSGMAAAAAAATTPMMFPGVQSSPYINQMAMQ----------SQMQLP--QFPVMNRSAPQNHPGLVCQTPV----QFQLQTQNQILSEQLARYM 391

[Close]

BLAST of CD859216 vs. TrEMBL
Match: B9DH29_ARATH (AT3G59060 protein OS=Arabidopsis thaliana GN=AT3G59060 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.083e-39
Identity = 97/169 (57.40%), Postives = 114/169 (67.46%), Query Frame = -1

Query:   41 LSNKVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGMA--------PMMHPGFQH--YMTQMSMSMPTRSFPPLPNPLQLPRTQFDPSVSTSQTPNPTLTCQNPLFGVFNYQNQMQNPALSEQYARYM 517
            + NK SQRSGS RR+RAAEVHNLSERRRRDRINE+MKALQ+LIPH S+TDKAS+L+EAI+YLKSLQ+QLQVMWMGSGMA        PMM PG Q   Y+ QM+M              Q+  +QF     ++   +P L CQNP+      Q Q QN  LSEQ ARYM
Sbjct:  241 MGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMWMGSGMAAAAAAAASPMMFPGVQSSPYINQMAMQS------------QMQLSQFPVMNRSAPQNHPGLVCQNPV----QLQLQAQNQILSEQLARYM 393

[Close]

BLAST of CD859216 vs. TrEMBL
Match: C5WY93_SORBI (Putative uncharacterized protein Sb01g006190 OS=Sorghum bicolor GN=Sb01g006190 PE=4 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.259e-36
Identity = 88/171 (51.46%), Postives = 109/171 (63.74%), Query Frame = -1

Query:   38 SEDTELKSALSN-KVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGMAPMMHPGFQHYMTQMSMSMPTRSFPPLPNPLQLPRTQFDPSVSTSQTPNPTLTCQNPLFGVFNYQNQ-MQNPALSEQYARYMN 544
            SED E + A    K S+R G  RR RAAEVHNLSERRRRDRINEKM+ALQ+LIPH +KTDKAS+L+E IEYLKSLQ+Q+Q+MWM SGMAPMM PG   +M  M++ M +   P      Q+PR  +      +  P  +    NPL    N  NQ MQN  L E    +++
Sbjct:  205 SEDAECEEATEETKPSRRHGPKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQVQIMWMTSGMAPMMFPGAHQFMPPMALGMNSGCIPAAQGLSQMPRLPYMNHPLPNHIPLNSSPAMNPL----NAANQMMQNGHLREASNHFLH 371

[Close]

BLAST of CD859216 vs. TrEMBL
Match: Q10CH6_ORYSJ (Helix-loop-helix DNA-binding domain containing protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g56950 PE=4 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.265e-36
Identity = 85/163 (52.15%), Postives = 103/163 (63.19%), Query Frame = -1

Query:   59 SEDTELKSALSNKVSQRS-GSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGMAPMMHPGFQHYMTQMSMSMPTRSFPPLPNPLQLPRTQFDPSVSTSQTPNPTLTCQNPLFGVFNYQNQMQNPALSE 544
            SED E ++    K S R  GS RR RAAEVHNLSERRRRDRINEKM+ALQ+LIPH +KTDKAS+L+EAIEYLKSLQ+Q+Q+MWM +GMAPMM PG   +M  M++ M +   P       + R  +         PN      +P     N  NQMQN  L E
Sbjct:  206 SEDAECEATEETKSSSRRYGSKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNKTDKASILDEAIEYLKSLQMQVQIMWMTTGMAPMMFPGAHQFMPPMAVGMNSACMPAAQGLSHMSRLPY----MNHSMPNHIPLNSSPAMNPMNVANQMQNIQLRE 364

[Close]

BLAST of CD859216 vs. SwissProt
Match: PIF4_ARATH (Transcription factor PIF4 OS=Arabidopsis thaliana GN=PIF4 PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 5.615e-42
Identity = 100/184 (54.35%), Postives = 122/184 (66.30%), Query Frame = -1

Query:   11 EDTELKSALSNKVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGM------APMMHPGFQHYMTQMSMSMPTRSFPPLPNPLQLPRTQFDPSVSTSQTPNPTLTCQNPLFGVFNYQNQMQNPALSEQYARYM-NYHLMQNASQ 541
            E   L  A+ NK +QRSGS RR+RAAEVHNLSERRRRDRINE+MKALQ+LIPH SKTDKAS+L+EAI+YLKSLQLQLQVMWMGSGM      APMM PG Q          P +    + +P+QLPR  F     ++   NP L CQNP          +QN  +S+++ARY+  +  MQ A+Q
Sbjct:  234 ESVSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVMWMGSGMAAAAASAPMMFPGVQ----------PQQFIRQIQSPVQLPR--FPVMDQSAIQNNPGLVCQNP----------VQNQIISDRFARYIGGFPHMQAATQ 395

[Close]

BLAST of CD859216 vs. SwissProt
Match: PIF5_ARATH (Transcription factor PIF5 OS=Arabidopsis thaliana GN=PIF5 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 8.107e-41
Identity = 97/169 (57.40%), Postives = 114/169 (67.46%), Query Frame = -1

Query:   41 LSNKVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGMA--------PMMHPGFQH--YMTQMSMSMPTRSFPPLPNPLQLPRTQFDPSVSTSQTPNPTLTCQNPLFGVFNYQNQMQNPALSEQYARYM 517
            + NK SQRSGS RR+RAAEVHNLSERRRRDRINE+MKALQ+LIPH S+TDKAS+L+EAI+YLKSLQ+QLQVMWMGSGMA        PMM PG Q   Y+ QM+M              Q+  +QF     ++   +P L CQNP+      Q Q QN  LSEQ ARYM
Sbjct:  241 MGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMWMGSGMAAAAAAAASPMMFPGVQSSPYINQMAMQS------------QMQLSQFPVMNRSAPQNHPGLVCQNPV----QLQLQAQNQILSEQLARYM 393

[Close]

BLAST of CD859216 vs. SwissProt
Match: PIF1_ARATH (Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.309e-34
Identity = 76/140 (54.29%), Postives = 101/140 (72.14%), Query Frame = -1

Query:  125 SEDTELKSALSNKVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGMAPMMHPGFQHYMTQMSMSMPTRSFPPLPNPLQLPRTQFDPSVSTSQTPNPTLT 544
            +++TE +S  + +    + S +R+RAAEVHNLSER+RRDRINE+MKALQ+LIP  +K+DKASML+EAIEY+KSLQLQ+Q+M MG GM PMM+PG Q YM  M+M M      P+P P  +P     P++  +Q P PT T
Sbjct:  260 TDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMPMMYPGMQQYMPHMAMGMGMNQ--PIPPPSFMP----FPNMLAAQRPLPTQT 393

[Close]

BLAST of CD859216 vs. SwissProt
Match: BH119_ARATH (Transcription factor bHLH119 OS=Arabidopsis thaliana GN=BHLH119 PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 3.906e-27
Identity = 78/178 (43.82%), Postives = 102/178 (57.30%), Query Frame = -1

Query:    5 SGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSG-MAPMMHPG-FQHYMTQMSMSMPTRSFPP--LPNP-LQLPR----TQFDPSVSTSQTPNPTLTCQN------PLFGVFNYQNQMQNPALSEQYARYMNYHLMQNASQPM 493
            S S +R+RAA++HNLSERRRR+RINE+MK LQ+L+P   KTDK SMLE+ IEY+KSLQLQ+Q+M MG G M PMMH G  Q +M  M+M M   + PP  +P P    PR        PS    + P P     +      P        NQ + PA    Y++++  H MQ    P+
Sbjct:  350 STSRKRSRAADMHNLSERRRRERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQIQMMSMGHGMMPPMMHEGNTQQFMPHMAMGMKGMNRPPPFVPFPGKTFPRPGHMAGVGPSYPALRYPFPDTQASDLSRVHVPSLHSNPVPNQPRFPAYINPYSQFVGLHQMQQPPLPL 527

[Close]

BLAST of CD859216 vs. SwissProt
Match: PIF3_ARATH (Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 7.367e-26
Identity = 69/119 (57.98%), Postives = 82/119 (68.91%), Query Frame = -1

Query:  224 SEDTELKSALSNKVSQRSGSG---RRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGM----APMMHPGFQHY-----MTQMSMSMP 544
            SED E +S    K +  S +G   +R+R+AEVHNLSERRRRDRINEKM+ALQ+LIP+ +K DKASML+EAIEYLKSLQLQ+Q+M M SG     A M  PG  HY        M M MP
Sbjct:  316 SEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYLPPAVMFPPGMGHYPAAAAAMAMGMGMP 434

[Close]

BLAST of CD859216 vs. SwissProt
Match: SPT_ARATH (Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.536e-23
Identity = 70/144 (48.61%), Postives = 88/144 (61.11%), Query Frame = -1

Query:  125 SQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSG--MAPMMHPGFQHYMTQMSMSMP-----------TRSFPPLPNPLQLPRT-----QFDPSVSTSQTPNPTLT 502
            S RS S +R RAAEVHNLSE+RRR RINEKMKALQ LIP+S+KTDKASML+EAIEYLK LQLQ+Q++ M +G  + P+  PG   +  Q+S   P           T  F    N  ++  T       +PS+ +   P P LT
Sbjct:  188 SSRSSS-KRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGINLHPLCLPGTTLHPLQLSQIRPPEATNDPLLNHTNQFASTSNAPEMINTVASSYALEPSIRSHFGPFPLLT 330

[Close]

BLAST of CD859216 vs. SwissProt
Match: BH127_ARATH (Transcription factor bHLH127 OS=Arabidopsis thaliana GN=BHLH127 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.218e-22
Identity = 62/162 (38.27%), Postives = 89/162 (54.94%), Query Frame = -1

Query:    8 SGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGMAPMMHPGFQHYMTQMSMSMPTRSFPPLPNPLQLPRTQFDPSVSTSQTPNPTLTCQNPLFGVFNYQNQMQNPALSEQYARYMNYHLMQNASQP 493
            S S +R+RAAE+HNL+ERRRR++INE+MK LQQLIP  +K+ K SMLE+ IEY+KSL++Q+        M     P +  + +Q  M+    S+PP   P    +T FDPS    Q+P P               N + N      Y +++ +H MQ +  P
Sbjct:  143 STSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQINQFMPHMAMGMNQPPAYIPFPSQAHMAGVGPSYPPPRYPFPNIQT-FDPSRVWLQSPQP---------------NPVSNQPQMNPYGQFVGHHQMQQSLPP 288

[Close]

BLAST of CD859216 vs. SwissProt
Match: UNE10_ARATH (Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.463e-21
Identity = 68/177 (38.42%), Postives = 98/177 (55.37%), Query Frame = -1

Query:   41 EDTELKSALSNKVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMW---MGSGMAPM-MHPGFQHYMTQMSMSMPTRSFPPLPNPLQLPRTQFD------PSVSTSQTPNPTLTCQNPLFGVFNYQNQMQNPALSEQYARYM 541
            ED E K A      + S S +R+RAA +HN SER+RRD+IN++MK LQ+L+P+SSKTDKASML+E IEYLK LQ Q+ +M    M S M PM M    Q  M+ MS  M       +P    L     +      P++  +  PNP L    P +   +  ++ Q+P + +  + ++
Sbjct:  194 EDEEEKKA----GGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSRMNMPSMMLPMAMQQQQQLQMSLMSNPMGLGMGMGMPGLGLLDLNSMNRAAASAPNIHANMMPNPFLPMNCPSWDASSNDSRFQSPLIPDPMSAFL 366

[Close]

BLAST of CD859216 vs. SwissProt
Match: BH023_ARATH (Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.041e-20
Identity = 57/118 (48.31%), Postives = 81/118 (68.64%), Query Frame = -1

Query:  200 EDTELKSALSNKVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGM-APMMHPG--FQHYMTQMSMSM-PTRSFPPLP 541
            E+T +++    + ++ S S +R+RAA +H LSERRRR +INE MKALQ+L+P  +KTD++SML++ IEY+KSLQ Q+Q+  MG  M  PMM+ G   Q YM  M+M M    +F P P
Sbjct:  255 EETNVENQ-GTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQMFSMGHVMIPPMMYAGNIQQQYMPHMAMGMNRPPAFIPFP 371

[Close]

BLAST of CD859216 vs. SwissProt
Match: ALC_ARATH (Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.346e-19
Identity = 55/97 (56.70%), Postives = 72/97 (74.23%), Query Frame = -1

Query:  266 SEDTELKSALSNKVS--QRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWM--GSGMAPMMHP 544
            SE  + K A  +K S  ++  S +RN  A+ HNLSE++RR +INEKMKALQ+LIP+S+KTDKASML+EAIEYLK LQLQ+Q + +  G G+ PM  P
Sbjct:   67 SETGQDKYAFEHKRSGAKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLAVMNGLGLNPMRLP 163

[Close]

BLAST of CD859216 vs. TAIR peptide
Match: AT2G43010.2 (| Symbols: PIF4, SRL2, AtPIF4 | phytochrome interacting factor 4 | chr2:17887003-17888823 FORWARD LENGTH=428)

HSP 1 Score: 174.866 bits (442), Expect = 2.470e-44
Identity = 102/186 (54.84%), Postives = 124/186 (66.67%), Query Frame = -1

Query:    5 EDTELKSALSNKVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGM------APMMHPGFQHYMTQMSMSMPTRSFPPLPNPLQLPRTQFDPSVSTSQTPNPTLTCQNPLFGVFNYQNQMQNPALSEQYARYM-NYHLMQNASQPM 541
            E   L  A+ NK +QRSGS RR+RAAEVHNLSERRRRDRINE+MKALQ+LIPH SKTDKAS+L+EAI+YLKSLQLQLQVMWMGSGM      APMM PG Q          P +    + +P+QLPR  F     ++   NP L CQNP          +QN  +S+++ARY+  +  MQ A+QPM
Sbjct:  234 ESVSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVMWMGSGMAAAAASAPMMFPGVQ----------PQQFIRQIQSPVQLPR--FPVMDQSAIQNNPGLVCQNP----------VQNQIISDRFARYIGGFPHMQAATQPM 397

[Close]

BLAST of CD859216 vs. TAIR peptide
Match: AT2G43010.1 (| Symbols: PIF4, SRL2, AtPIF4 | phytochrome interacting factor 4 | chr2:17887003-17888823 FORWARD LENGTH=430)

HSP 1 Score: 170.244 bits (430), Expect = 6.085e-43
Identity = 100/184 (54.35%), Postives = 122/184 (66.30%), Query Frame = -1

Query:   11 EDTELKSALSNKVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGM------APMMHPGFQHYMTQMSMSMPTRSFPPLPNPLQLPRTQFDPSVSTSQTPNPTLTCQNPLFGVFNYQNQMQNPALSEQYARYM-NYHLMQNASQ 541
            E   L  A+ NK +QRSGS RR+RAAEVHNLSERRRRDRINE+MKALQ+LIPH SKTDKAS+L+EAI+YLKSLQLQLQVMWMGSGM      APMM PG Q          P +    + +P+QLPR  F     ++   NP L CQNP          +QN  +S+++ARY+  +  MQ A+Q
Sbjct:  234 ESVSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVMWMGSGMAAAAASAPMMFPGVQ----------PQQFIRQIQSPVQLPR--FPVMDQSAIQNNPGLVCQNP----------VQNQIISDRFARYIGGFPHMQAATQ 395

[Close]

BLAST of CD859216 vs. TAIR peptide
Match: AT3G59060.4 (| Symbols: PIL6, PIF5 | phytochrome interacting factor 3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=444)

HSP 1 Score: 166.392 bits (420), Expect = 8.786e-42
Identity = 97/169 (57.40%), Postives = 114/169 (67.46%), Query Frame = -1

Query:   41 LSNKVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGMA--------PMMHPGFQH--YMTQMSMSMPTRSFPPLPNPLQLPRTQFDPSVSTSQTPNPTLTCQNPLFGVFNYQNQMQNPALSEQYARYM 517
            + NK SQRSGS RR+RAAEVHNLSERRRRDRINE+MKALQ+LIPH S+TDKAS+L+EAI+YLKSLQ+QLQVMWMGSGMA        PMM PG Q   Y+ QM+M              Q+  +QF     ++   +P L CQNP+      Q Q QN  LSEQ ARYM
Sbjct:  241 MGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMWMGSGMAAAAAAAASPMMFPGVQSSPYINQMAMQS------------QMQLSQFPVMNRSAPQNHPGLVCQNPV----QLQLQAQNQILSEQLARYM 393

[Close]

BLAST of CD859216 vs. TAIR peptide
Match: AT3G59060.3 (| Symbols: PIL6, PIF5 | phytochrome interacting factor 3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=444)

HSP 1 Score: 166.392 bits (420), Expect = 8.786e-42
Identity = 97/169 (57.40%), Postives = 114/169 (67.46%), Query Frame = -1

Query:   41 LSNKVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGMA--------PMMHPGFQH--YMTQMSMSMPTRSFPPLPNPLQLPRTQFDPSVSTSQTPNPTLTCQNPLFGVFNYQNQMQNPALSEQYARYM 517
            + NK SQRSGS RR+RAAEVHNLSERRRRDRINE+MKALQ+LIPH S+TDKAS+L+EAI+YLKSLQ+QLQVMWMGSGMA        PMM PG Q   Y+ QM+M              Q+  +QF     ++   +P L CQNP+      Q Q QN  LSEQ ARYM
Sbjct:  241 MGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMWMGSGMAAAAAAAASPMMFPGVQSSPYINQMAMQS------------QMQLSQFPVMNRSAPQNHPGLVCQNPV----QLQLQAQNQILSEQLARYM 393

[Close]

BLAST of CD859216 vs. TAIR peptide
Match: AT3G59060.2 (| Symbols: PIL6, PIF5 | phytochrome interacting factor 3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=444)

HSP 1 Score: 166.392 bits (420), Expect = 8.786e-42
Identity = 97/169 (57.40%), Postives = 114/169 (67.46%), Query Frame = -1

Query:   41 LSNKVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGMA--------PMMHPGFQH--YMTQMSMSMPTRSFPPLPNPLQLPRTQFDPSVSTSQTPNPTLTCQNPLFGVFNYQNQMQNPALSEQYARYM 517
            + NK SQRSGS RR+RAAEVHNLSERRRRDRINE+MKALQ+LIPH S+TDKAS+L+EAI+YLKSLQ+QLQVMWMGSGMA        PMM PG Q   Y+ QM+M              Q+  +QF     ++   +P L CQNP+      Q Q QN  LSEQ ARYM
Sbjct:  241 MGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMWMGSGMAAAAAAAASPMMFPGVQSSPYINQMAMQS------------QMQLSQFPVMNRSAPQNHPGLVCQNPV----QLQLQAQNQILSEQLARYM 393

[Close]

BLAST of CD859216 vs. TAIR peptide
Match: AT3G59060.1 (| Symbols: PIL6, PIF5 | phytochrome interacting factor 3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=442)

HSP 1 Score: 166.392 bits (420), Expect = 8.786e-42
Identity = 97/169 (57.40%), Postives = 114/169 (67.46%), Query Frame = -1

Query:   41 LSNKVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGMA--------PMMHPGFQH--YMTQMSMSMPTRSFPPLPNPLQLPRTQFDPSVSTSQTPNPTLTCQNPLFGVFNYQNQMQNPALSEQYARYM 517
            + NK SQRSGS RR+RAAEVHNLSERRRRDRINE+MKALQ+LIPH S+TDKAS+L+EAI+YLKSLQ+QLQVMWMGSGMA        PMM PG Q   Y+ QM+M              Q+  +QF     ++   +P L CQNP+      Q Q QN  LSEQ ARYM
Sbjct:  241 MGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVMWMGSGMAAAAAAAASPMMFPGVQSSPYINQMAMQS------------QMQLSQFPVMNRSAPQNHPGLVCQNPV----QLQLQAQNQILSEQLARYM 393

[Close]

BLAST of CD859216 vs. TAIR peptide
Match: AT2G20180.3 (| Symbols: PIL5 | phytochrome interacting factor 3-like 5 | chr2:8704276-8706538 REVERSE LENGTH=478)

HSP 1 Score: 144.05 bits (362), Expect = 4.670e-35
Identity = 76/140 (54.29%), Postives = 101/140 (72.14%), Query Frame = -1

Query:  125 SEDTELKSALSNKVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGMAPMMHPGFQHYMTQMSMSMPTRSFPPLPNPLQLPRTQFDPSVSTSQTPNPTLT 544
            +++TE +S  + +    + S +R+RAAEVHNLSER+RRDRINE+MKALQ+LIP  +K+DKASML+EAIEY+KSLQLQ+Q+M MG GM PMM+PG Q YM  M+M M      P+P P  +P     P++  +Q P PT T
Sbjct:  260 TDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMPMMYPGMQQYMPHMAMGMGMNQ--PIPPPSFMP----FPNMLAAQRPLPTQT 393

[Close]

BLAST of CD859216 vs. TAIR peptide
Match: AT2G20180.1 (| Symbols: PIL5, PIF1 | phytochrome interacting factor 3-like 5 | chr2:8704525-8706237 REVERSE LENGTH=407)

HSP 1 Score: 144.05 bits (362), Expect = 4.670e-35
Identity = 76/140 (54.29%), Postives = 101/140 (72.14%), Query Frame = -1

Query:  125 SEDTELKSALSNKVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGMAPMMHPGFQHYMTQMSMSMPTRSFPPLPNPLQLPRTQFDPSVSTSQTPNPTLT 544
            +++TE +S  + +    + S +R+RAAEVHNLSER+RRDRINE+MKALQ+LIP  +K+DKASML+EAIEY+KSLQLQ+Q+M MG GM PMM+PG Q YM  M+M M      P+P P  +P     P++  +Q P PT T
Sbjct:  189 TDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMPMMYPGMQQYMPHMAMGMGMNQ--PIPPPSFMP----FPNMLAAQRPLPTQT 322

[Close]

BLAST of CD859216 vs. TAIR peptide
Match: AT2G20180.2 (| Symbols: PIL5 | phytochrome interacting factor 3-like 5 | chr2:8704525-8706538 REVERSE LENGTH=478)

HSP 1 Score: 144.05 bits (362), Expect = 4.670e-35
Identity = 76/140 (54.29%), Postives = 101/140 (72.14%), Query Frame = -1

Query:  125 SEDTELKSALSNKVSQRSGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSGMAPMMHPGFQHYMTQMSMSMPTRSFPPLPNPLQLPRTQFDPSVSTSQTPNPTLT 544
            +++TE +S  + +    + S +R+RAAEVHNLSER+RRDRINE+MKALQ+LIP  +K+DKASML+EAIEY+KSLQLQ+Q+M MG GM PMM+PG Q YM  M+M M      P+P P  +P     P++  +Q P PT T
Sbjct:  260 TDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMPMMYPGMQQYMPHMAMGMGMNQ--PIPPPSFMP----FPNMLAAQRPLPTQT 393

[Close]

BLAST of CD859216 vs. TAIR peptide
Match: AT4G28811.1 (| Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr4:14225335-14227840 FORWARD LENGTH=544)

HSP 1 Score: 120.939 bits (302), Expect = 4.233e-28
Identity = 78/178 (43.82%), Postives = 102/178 (57.30%), Query Frame = -1

Query:    5 SGSGRRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSSKTDKASMLEEAIEYLKSLQLQLQVMWMGSG-MAPMMHPG-FQHYMTQMSMSMPTRSFPP--LPNP-LQLPR----TQFDPSVSTSQTPNPTLTCQN------PLFGVFNYQNQMQNPALSEQYARYMNYHLMQNASQPM 493
            S S +R+RAA++HNLSERRRR+RINE+MK LQ+L+P   KTDK SMLE+ IEY+KSLQLQ+Q+M MG G M PMMH G  Q +M  M+M M   + PP  +P P    PR        PS    + P P     +      P        NQ + PA    Y++++  H MQ    P+
Sbjct:  350 STSRKRSRAADMHNLSERRRRERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQIQMMSMGHGMMPPMMHEGNTQQFMPHMAMGMKGMNRPPPFVPFPGKTFPRPGHMAGVGPSYPALRYPFPDTQASDLSRVHVPSLHSNPVPNQPRFPAYINPYSQFVGLHQMQQPPLPL 527

The following BLAST results are available for this feature:

BLAST of CD859216 vs. TrEMBL
BLAST of CD859216 vs. SwissProt
BLAST of CD859216 vs. TAIR peptide

BLAST of CD859216 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9GSQ9_POPTR	3.825e-61	66.49	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9H863_POPTR	3.351e-57	63.33	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7LJW8_ARALY	8.860e-42	54.95	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
D5JZM7_ARATH	7.500e-41	54.35	Phytochrome interacting factor 4 OS=Arabidopsis th...	[more]
B9DHW1_ARATH	7.500e-41	54.35	AT2G43010 protein (Fragment) OS=Arabidopsis thalia...	[more]
B9DFT8_ARATH	7.500e-41	54.35	AT2G43010 protein OS=Arabidopsis thaliana GN=PIF4 ...	[more]
D7LWA2_ARALY	1.279e-40	58.82	Phytochrome-interacting factor 5 OS=Arabidopsis ly...	[more]
B9DH29_ARATH	1.083e-39	57.40	AT3G59060 protein OS=Arabidopsis thaliana GN=AT3G5...	[more]
C5WY93_SORBI	4.259e-36	51.46	Putative uncharacterized protein Sb01g006190 OS=So...	[more]
Q10CH6_ORYSJ	7.265e-36	52.15	Helix-loop-helix DNA-binding domain containing pro...	[more]

BLAST of CD859216 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
PIF4_ARATH	5.615e-42	54.35	Transcription factor PIF4 OS=Arabidopsis thaliana ...	[more]
PIF5_ARATH	8.107e-41	57.40	Transcription factor PIF5 OS=Arabidopsis thaliana ...	[more]
PIF1_ARATH	4.309e-34	54.29	Transcription factor PIF1 OS=Arabidopsis thaliana ...	[more]
BH119_ARATH	3.906e-27	43.82	Transcription factor bHLH119 OS=Arabidopsis thalia...	[more]
PIF3_ARATH	7.367e-26	57.98	Transcription factor PIF3 OS=Arabidopsis thaliana ...	[more]
SPT_ARATH	1.536e-23	48.61	Transcription factor SPATULA OS=Arabidopsis thalia...	[more]
BH127_ARATH	2.218e-22	38.27	Transcription factor bHLH127 OS=Arabidopsis thalia...	[more]
UNE10_ARATH	5.463e-21	38.42	Transcription factor UNE10 OS=Arabidopsis thaliana...	[more]
BH023_ARATH	6.041e-20	48.31	Transcription factor bHLH23 OS=Arabidopsis thalian...	[more]
ALC_ARATH	1.346e-19	56.70	Transcription factor ALC OS=Arabidopsis thaliana G...	[more]

BLAST of CD859216 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT2G43010.2	2.470e-44	54.84	\| Symbols: PIF4, SRL2, AtPIF4 \| phytochrome intera...	[more]
AT2G43010.1	6.085e-43	54.35	\| Symbols: PIF4, SRL2, AtPIF4 \| phytochrome intera...	[more]
AT3G59060.4	8.786e-42	57.40	\| Symbols: PIL6, PIF5 \| phytochrome interacting fa...	[more]
AT3G59060.3	8.786e-42	57.40	\| Symbols: PIL6, PIF5 \| phytochrome interacting fa...	[more]
AT3G59060.2	8.786e-42	57.40	\| Symbols: PIL6, PIF5 \| phytochrome interacting fa...	[more]
AT3G59060.1	8.786e-42	57.40	\| Symbols: PIL6, PIF5 \| phytochrome interacting fa...	[more]
AT2G20180.3	4.670e-35	54.29	\| Symbols: PIL5 \| phytochrome interacting factor 3...	[more]
AT2G20180.1	4.670e-35	54.29	\| Symbols: PIL5, PIF1 \| phytochrome interacting fa...	[more]
AT2G20180.2	4.670e-35	54.29	\| Symbols: PIL5 \| phytochrome interacting factor 3...	[more]
AT4G28811.1	4.233e-28	43.82	\| Symbols: \| basic helix-loop-helix (bHLH) DNA-bi...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 8..23 score
None	No IPR available	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 34..74 score: 8
None	No IPR available	PANTHER	PTHR12565:SF7	CENTROMERE-BINDING PROTEIN 1, CBP-1	coord: 34..74 score: 8
IPR001092	Helix-loop-helix DNA-binding domain	PFAM	PF00010	HLH	coord: 29..75 score: 5.7
IPR001092	Helix-loop-helix DNA-binding domain	SMART	SM00353	no description	coord: 31..80 score: 1.3
IPR001092	Helix-loop-helix DNA-binding domain	PROFILE	PS50888	HLH	coord: 22..75 score: 16
IPR011598	Helix-loop-helix DNA-binding	GENE3D	4.10.280.10	no description	coord: 22..83 score: 2.5
IPR011598	Helix-loop-helix DNA-binding	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 23..107 score: 5.8

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CD859216 ID=CD859216; Name=CD859216; organism=Pisum sativum; type=EST; length=544bp
TATTCATCGGCTGAGACGCGTTTTGCATAAGATGATAGTTCATGTATCGA
GCATATTGCTCTGAAAGAGCTGGATTTTGCATCTGATTTTGGTAGTTAAA
GACACCGAAAAGAGGATTTTGACATGTTAATGTTGGATTTGGTGTCTGAG
ACGTCGATACGGACGGATCAAATTGCGTTCTCGGTAATTGCAACGGATTT
GGAAGCGGGGGAAATGAACGTGTAGGCATTGACATGCTCATTTGTGTCAT
GTAGTGCTGAAATCCAGGGTGCATCATTGGAGCCATGCCAGATCCCATCC
ACATTACCTGAAGTTGTAACTGAAGTGATTTCAAGTATTCAATTGCCTCT
TCTAACATTGAGGCTTTGTCTGTCTTACTACTGTGAGGTATGAGTTGTTG
CAGTGCTTTCATCTTCTCATTAATCCTATCTCTTCGTCTCCTTTCTGAAA
GATTATGCACTTCAGCAGCCCGATTCCTTCGACCCGACCCTGACCTCTGC
GACACCTTGTTCGACAAAGCTGATTTAAGTTCTGTGTCCTCACT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0030528	obsolete transcription regulator activity

Vocabulary: **Biological Process**
Term	Definition
GO:0045449	regulation of transcription

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR001092	Helix-loop-helix DNA-binding domain
IPR011598	bHLH_dom

Search form