CD859476

EST Overview
NameCD859476
Unique NameCD859476
TypeEST
OrganismPisum sativum (pea)
Sequence length333
Libraries
Library NameType
LIBEST_014000 F15cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of CD859476 vs. TrEMBL
Match: C6TFQ6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 6.938e-42
Identity = 75/88 (85.23%), Postives = 85/88 (96.59%), Query Frame = -1
Query:   70 DTAGLKSSKLYIWNGVALFFGWLIARVFLFMFLFTHMWTHFDEVKEVFPMGFYSLLVVPPVLSMMNLFWFWKIAKGMVKTLSKAKHSE 333
            D AGLKSSKLY+WNG+ALFFGWLIAR+FLFMF F HMWTHFDEVKE+FP+GFYSLLVVPP+L+MMNLFWFWKIAKG+VKT+SKAKHS+
Sbjct:  186 DIAGLKSSKLYVWNGIALFFGWLIARIFLFMFFFIHMWTHFDEVKEIFPLGFYSLLVVPPMLAMMNLFWFWKIAKGLVKTISKAKHSK 273          
BLAST of CD859476 vs. TrEMBL
Match: D7SJF6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00024517001 PE=4 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.688e-35
Identity = 66/88 (75.00%), Postives = 79/88 (89.77%), Query Frame = -1
Query:   70 DTAGLKSSKLYIWNGVALFFGWLIARVFLFMFLFTHMWTHFDEVKEVFPMGFYSLLVVPPVLSMMNLFWFWKIAKGMVKTLSKAKHSE 333
            D AGLKSS LYI NG+ALFFGWL+AR+ LF+F F HM  HFDEVK++FP+GFYSLL+VPPVL+MMN FWFWKIAKG++KTLSKA+HS+
Sbjct:  170 DVAGLKSSNLYICNGIALFFGWLVARILLFIFFFYHMIIHFDEVKKIFPLGFYSLLMVPPVLAMMNAFWFWKIAKGLIKTLSKARHSQ 257          
BLAST of CD859476 vs. TrEMBL
Match: B9IQX6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1108612 PE=4 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.237e-32
Identity = 58/88 (65.91%), Postives = 76/88 (86.36%), Query Frame = -1
Query:   70 DTAGLKSSKLYIWNGVALFFGWLIARVFLFMFLFTHMWTHFDEVKEVFPMGFYSLLVVPPVLSMMNLFWFWKIAKGMVKTLSKAKHSE 333
            D AG KSSKLYIWNGV LF GWL+AR+ LF+F F+HM+ HFD+VK++FP+GFYS+LV+P  L++MN+ WFWKI KG++KTLSKA+H +
Sbjct:  178 DVAGQKSSKLYIWNGVLLFMGWLVARILLFIFFFSHMFIHFDQVKQIFPLGFYSILVIPGTLAVMNVLWFWKIVKGLMKTLSKARHGQ 265          
BLAST of CD859476 vs. TrEMBL
Match: C5YZV8_SORBI (Putative uncharacterized protein Sb09g023740 OS=Sorghum bicolor GN=Sb09g023740 PE=4 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.228e-30
Identity = 59/87 (67.82%), Postives = 72/87 (82.76%), Query Frame = -1
Query:   73 DTAGLKSSKLYIWNGVALFFGWLIARVFLFMFLFTHMWTHFDEVKEVFPMGFYSLLVVPPVLSMMNLFWFWKIAKGMVKTLSKAKHS 333
            D AG K SKLY++NG+ALF GWL+ARV LF++ F HM+ HFD+V+ VFP+GFYS+L VPP+LS+MNL WFWKI KGMVKTL K K S
Sbjct:  171 DLAGRKGSKLYLYNGLALFVGWLVARVILFVYFFAHMYLHFDQVRTVFPLGFYSMLTVPPLLSLMNLVWFWKICKGMVKTLCKTKQS 257          
BLAST of CD859476 vs. TrEMBL
Match: B9SK69_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1027640 PE=4 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.603e-30
Identity = 61/89 (68.54%), Postives = 76/89 (85.39%), Query Frame = -1
Query:   70 DTAGLKSSKLYIWNGVALFFGWLIARVFLFMFLFTHMWTHFDEVKEVFPMGFYSLLVVPPVLSMMNLFWFWKIAKGMVKTLSKAK-HSE 333
            D AG KSSKLY+ NGV LF GWL+AR+ LF+  FTHM+ HFD+VK+VFP+GFYSLL VPPVL +MN+ WFWKIA+G++KTLS+AK HS+
Sbjct:  179 DVAGQKSSKLYVSNGVLLFLGWLVARIILFICFFTHMFIHFDQVKKVFPLGFYSLLSVPPVLGVMNVVWFWKIARGLIKTLSRAKNHSQ 267          
BLAST of CD859476 vs. TrEMBL
Match: Q9SV86_ARATH (Putative uncharacterized protein AT4g10360 OS=Arabidopsis thaliana GN=F24G24.160 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.357e-29
Identity = 57/87 (65.52%), Postives = 70/87 (80.46%), Query Frame = -1
Query:   73 DTAGLKSSKLYIWNGVALFFGWLIARVFLFMFLFTHMWTHFDEVKEVFPMGFYSLLVVPPVLSMMNLFWFWKIAKGMVKTLSKAKHS 333
            D +G K SK Y  NG+ALF GWL+ARV LF+F F HM+ HF +VK+VFP+GFYSLL +PP L++MNL WFWKI KG++KTLSKAK S
Sbjct:  172 DNSGQKGSKAYTLNGIALFLGWLVARVLLFIFFFVHMYLHFHQVKQVFPLGFYSLLTIPPALAVMNLLWFWKITKGLIKTLSKAKTS 258          
BLAST of CD859476 vs. TrEMBL
Match: Q93ZA9_ARATH (AT4G10360 protein OS=Arabidopsis thaliana GN=AT4G10360 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.357e-29
Identity = 57/87 (65.52%), Postives = 70/87 (80.46%), Query Frame = -1
Query:   73 DTAGLKSSKLYIWNGVALFFGWLIARVFLFMFLFTHMWTHFDEVKEVFPMGFYSLLVVPPVLSMMNLFWFWKIAKGMVKTLSKAKHS 333
            D +G K SK Y  NG+ALF GWL+ARV LF+F F HM+ HF +VK+VFP+GFYSLL +PP L++MNL WFWKI KG++KTLSKAK S
Sbjct:  175 DNSGQKGSKAYTLNGIALFLGWLVARVLLFIFFFVHMYLHFHQVKQVFPLGFYSLLTIPPALAVMNLLWFWKITKGLIKTLSKAKTS 261          
BLAST of CD859476 vs. TrEMBL
Match: B9DI64_ARATH (AT4G10360 protein (Fragment) OS=Arabidopsis thaliana GN=AT4G10360 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.357e-29
Identity = 57/87 (65.52%), Postives = 70/87 (80.46%), Query Frame = -1
Query:   73 DTAGLKSSKLYIWNGVALFFGWLIARVFLFMFLFTHMWTHFDEVKEVFPMGFYSLLVVPPVLSMMNLFWFWKIAKGMVKTLSKAKHS 333
            D +G K SK Y  NG+ALF GWL+ARV LF+F F HM+ HF +VK+VFP+GFYSLL +PP L++MNL WFWKI KG++KTLSKAK S
Sbjct:   65 DNSGQKGSKAYTLNGIALFLGWLVARVLLFIFFFVHMYLHFHQVKQVFPLGFYSLLTIPPALAVMNLLWFWKITKGLIKTLSKAKTS 151          
BLAST of CD859476 vs. TrEMBL
Match: Q8LEX4_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.773e-29
Identity = 56/87 (64.37%), Postives = 70/87 (80.46%), Query Frame = -1
Query:   73 DTAGLKSSKLYIWNGVALFFGWLIARVFLFMFLFTHMWTHFDEVKEVFPMGFYSLLVVPPVLSMMNLFWFWKIAKGMVKTLSKAKHS 333
            D +G K SK Y  NG+ALF GWL+AR+ LF+F F HM+ HF +VK+VFP+GFYSLL +PP L++MNL WFWKI KG++KTLSKAK S
Sbjct:  175 DNSGQKGSKAYTLNGIALFLGWLVARILLFIFFFVHMYLHFHQVKQVFPLGFYSLLTIPPALAVMNLLWFWKITKGLIKTLSKAKTS 261          
BLAST of CD859476 vs. TrEMBL
Match: Q93VP0_ORYSJ (Os01g0817100 protein OS=Oryza sativa subsp. japonica GN=B1148D12.18 PE=4 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.315e-29
Identity = 55/85 (64.71%), Postives = 72/85 (84.71%), Query Frame = -1
Query:   79 DTAGLKSSKLYIWNGVALFFGWLIARVFLFMFLFTHMWTHFDEVKEVFPMGFYSLLVVPPVLSMMNLFWFWKIAKGMVKTLSKAK 333
            + AG K+  LY++NG+ALF GWL+ARV LF++ FTHM+ HFD+VK +FP+GFYS+L VPP L++MNLFWFWKI KGM+KTLSK +
Sbjct:  167 EVAGKKTHNLYLYNGLALFVGWLVARVILFIYFFTHMYFHFDQVKSIFPLGFYSILTVPPALAVMNLFWFWKIFKGMLKTLSKRR 251          
BLAST of CD859476 vs. TAIR peptide
Match: AT4G10360.2 (| Symbols: | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein | chr4:6420679-6422108 FORWARD LENGTH=266)

HSP 1 Score: 132.494 bits (332), Expect = 5.232e-32
Identity = 57/87 (65.52%), Postives = 70/87 (80.46%), Query Frame = -1
Query:   73 DTAGLKSSKLYIWNGVALFFGWLIARVFLFMFLFTHMWTHFDEVKEVFPMGFYSLLVVPPVLSMMNLFWFWKIAKGMVKTLSKAKHS 333
            D +G K SK Y  NG+ALF GWL+ARV LF+F F HM+ HF +VK+VFP+GFYSLL +PP L++MNL WFWKI KG++KTLSKAK S
Sbjct:  175 DNSGQKGSKAYTLNGIALFLGWLVARVLLFIFFFVHMYLHFHQVKQVFPLGFYSLLTIPPALAVMNLLWFWKITKGLIKTLSKAKTS 261          
BLAST of CD859476 vs. TAIR peptide
Match: AT4G10360.1 (| Symbols: | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein | chr4:6420679-6422108 FORWARD LENGTH=266)

HSP 1 Score: 132.494 bits (332), Expect = 5.232e-32
Identity = 57/87 (65.52%), Postives = 70/87 (80.46%), Query Frame = -1
Query:   73 DTAGLKSSKLYIWNGVALFFGWLIARVFLFMFLFTHMWTHFDEVKEVFPMGFYSLLVVPPVLSMMNLFWFWKIAKGMVKTLSKAKHS 333
            D +G K SK Y  NG+ALF GWL+ARV LF+F F HM+ HF +VK+VFP+GFYSLL +PP L++MNL WFWKI KG++KTLSKAK S
Sbjct:  175 DNSGQKGSKAYTLNGIALFLGWLVARVLLFIFFFVHMYLHFHQVKQVFPLGFYSLLTIPPALAVMNLLWFWKITKGLIKTLSKAKTS 261          
BLAST of CD859476 vs. TAIR peptide
Match: AT4G19645.2 (| Symbols: | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein | chr4:10689941-10691298 REVERSE LENGTH=268)

HSP 1 Score: 101.679 bits (252), Expect = 9.891e-23
Identity = 46/83 (55.42%), Postives = 61/83 (73.49%), Query Frame = -1
Query:   85 DTAGLKSSKLYIWNGVALFFGWLIARVFLFMFLFTHMWTHFDEVKEVFPMGFYSLLVVPPVLSMMNLFWFWKIAKGMVKTLSK 333
            D AGLK SK Y+ NGVA+FF WL AR+ LF+++F H++TH+D+V E+   G+  + VVP  LS+MNL WF KI KG+ KTL K
Sbjct:  184 DIAGLKRSKAYLVNGVAIFFAWLTARILLFIYMFYHVYTHYDQVIEMHTFGYLLVFVVPISLSVMNLIWFGKIVKGLKKTLEK 266          
BLAST of CD859476 vs. TAIR peptide
Match: AT4G19645.1 (| Symbols: | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein | chr4:10689941-10691298 REVERSE LENGTH=268)

HSP 1 Score: 101.679 bits (252), Expect = 9.891e-23
Identity = 46/83 (55.42%), Postives = 61/83 (73.49%), Query Frame = -1
Query:   85 DTAGLKSSKLYIWNGVALFFGWLIARVFLFMFLFTHMWTHFDEVKEVFPMGFYSLLVVPPVLSMMNLFWFWKIAKGMVKTLSK 333
            D AGLK SK Y+ NGVA+FF WL AR+ LF+++F H++TH+D+V E+   G+  + VVP  LS+MNL WF KI KG+ KTL K
Sbjct:  184 DIAGLKRSKAYLVNGVAIFFAWLTARILLFIYMFYHVYTHYDQVIEMHTFGYLLVFVVPISLSVMNLIWFGKIVKGLKKTLEK 266          
BLAST of CD859476 vs. TAIR peptide
Match: AT1G31300.2 (| Symbols: | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein | chr1:11194308-11195955 FORWARD LENGTH=278)

HSP 1 Score: 88.1965 bits (217), Expect = 1.132e-18
Identity = 37/83 (44.58%), Postives = 57/83 (68.67%), Query Frame = -1
Query:   85 DTAGLKSSKLYIWNGVALFFGWLIARVFLFMFLFTHMWTHFDEVKEVFPMGFYSLLVVPPVLSMMNLFWFWKIAKGMVKTLSK 333
            DTAG+K S  Y+ NGV +F  WL+AR+ LF+++F H++ H+++V  +   G+  +  VP  L +MNL WF KI +G+ KTL+K
Sbjct:  192 DTAGMKKSLAYVVNGVFIFLAWLVARILLFIYMFYHVYLHYNQVMRMHIFGYVLVFGVPAALGVMNLIWFGKIVRGVKKTLAK 274          
BLAST of CD859476 vs. TAIR peptide
Match: AT1G31300.1 (| Symbols: | TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein | chr1:11194308-11195955 FORWARD LENGTH=278)

HSP 1 Score: 88.1965 bits (217), Expect = 1.132e-18
Identity = 37/83 (44.58%), Postives = 57/83 (68.67%), Query Frame = -1
Query:   85 DTAGLKSSKLYIWNGVALFFGWLIARVFLFMFLFTHMWTHFDEVKEVFPMGFYSLLVVPPVLSMMNLFWFWKIAKGMVKTLSK 333
            DTAG+K S  Y+ NGV +F  WL+AR+ LF+++F H++ H+++V  +   G+  +  VP  L +MNL WF KI +G+ KTL+K
Sbjct:  192 DTAGMKKSLAYVVNGVFIFLAWLVARILLFIYMFYHVYLHYNQVMRMHIFGYVLVFGVPAALGVMNLIWFGKIVRGVKKTLAK 274          
The following BLAST results are available for this feature:
BLAST of CD859476 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TFQ6_SOYBN6.938e-4285.23Putative uncharacterized protein OS=Glycine max PE... [more]
D7SJF6_VITVI3.688e-3575.00Whole genome shotgun sequence of line PN40024, sca... [more]
B9IQX6_POPTR2.237e-3265.91Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C5YZV8_SORBI1.228e-3067.82Putative uncharacterized protein Sb09g023740 OS=So... [more]
B9SK69_RICCO1.603e-3068.54Putative uncharacterized protein OS=Ricinus commun... [more]
Q9SV86_ARATH1.357e-2965.52Putative uncharacterized protein AT4g10360 OS=Arab... [more]
Q93ZA9_ARATH1.357e-2965.52AT4G10360 protein OS=Arabidopsis thaliana GN=AT4G1... [more]
B9DI64_ARATH1.357e-2965.52AT4G10360 protein (Fragment) OS=Arabidopsis thalia... [more]
Q8LEX4_ARATH1.773e-2964.37Putative uncharacterized protein OS=Arabidopsis th... [more]
Q93VP0_ORYSJ2.315e-2964.71Os01g0817100 protein OS=Oryza sativa subsp. japoni... [more]
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BLAST of CD859476 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 6
Match NameE-valueIdentityDescription
AT4G10360.25.232e-3265.52| Symbols: | TRAM, LAG1 and CLN8 (TLC) lipid-sens... [more]
AT4G10360.15.232e-3265.52| Symbols: | TRAM, LAG1 and CLN8 (TLC) lipid-sens... [more]
AT4G19645.29.891e-2355.42| Symbols: | TRAM, LAG1 and CLN8 (TLC) lipid-sens... [more]
AT4G19645.19.891e-2355.42| Symbols: | TRAM, LAG1 and CLN8 (TLC) lipid-sens... [more]
AT1G31300.21.132e-1844.58| Symbols: | TRAM, LAG1 and CLN8 (TLC) lipid-sens... [more]
AT1G31300.11.132e-1844.58| Symbols: | TRAM, LAG1 and CLN8 (TLC) lipid-sens... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006634TRAM/LAG1/CLN8 homology domainPFAMPF03798TRAM_LAG1_CLN8coord: 7..75
score: 5.1
IPR006634TRAM/LAG1/CLN8 homology domainPROFILEPS50922TLCcoord: 1..82
score: 16

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CD859476 ID=CD859476; Name=CD859476; organism=Pisum sativum; type=EST; length=333bp
TGAAGCAATGCAATGACCATTTCATGCATCAAGTAGAAAGCAGCAGAAAA
AGTAGCAAGATCATCATCACTCGCTATGTTTGGCTTTTGAAAGAGTTTTG
ACCATACCCTTGGCAATCTTCCAGAACCAAAACAAATTCATCATTGACAA
CACAGGAGGCACCACCAGTAAGCTATAGAAACCCATCGGAAAGACCTCCT
TAACCTCATCAAAATGGGTCCACATGTGAGTAAACAAGAACATGAACAGA
AAAACCCTTGCTATCAGCCACCCGAAGAACAATGCAACGCCATTCCAGAT
GTAAAGTTTTGAGCTTTTAAGACCAGCGGTATC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR006634TLC-dom