CD860678
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CD860678 vs. SwissProt
Match: ILVB3_BRANA (Acetolactate synthase 3, chloroplastic OS=Brassica napus PE=3 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 6.655e-7 Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 1 Query: 1 EHVLPMIPSNGSFKDVITEGDGRTSY 78 EHVLPMIPS G+FKDVITEGDGRT Y Sbjct: 627 EHVLPMIPSGGTFKDVITEGDGRTKY 652
BLAST of CD860678 vs. SwissProt
Match: ILVB2_TOBAC (Acetolactate synthase 2, chloroplastic OS=Nicotiana tabacum GN=ALS SURB PE=1 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 6.655e-7 Identity = 23/26 (88.46%), Postives = 25/26 (96.15%), Query Frame = 1 Query: 1 EHVLPMIPSNGSFKDVITEGDGRTSY 78 EHVLPMIPS G+FKDVITEGDGR+SY Sbjct: 639 EHVLPMIPSGGAFKDVITEGDGRSSY 664
BLAST of CD860678 vs. SwissProt
Match: ILVB1_TOBAC (Acetolactate synthase 1, chloroplastic OS=Nicotiana tabacum GN=ALS SURA PE=1 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 6.655e-7 Identity = 23/26 (88.46%), Postives = 25/26 (96.15%), Query Frame = 1 Query: 1 EHVLPMIPSNGSFKDVITEGDGRTSY 78 EHVLPMIPS G+FKDVITEGDGR+SY Sbjct: 642 EHVLPMIPSGGAFKDVITEGDGRSSY 667
BLAST of CD860678 vs. SwissProt
Match: ILVB1_BRANA (Acetolactate synthase 1, chloroplastic OS=Brassica napus PE=3 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 6.655e-7 Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 1 Query: 1 EHVLPMIPSNGSFKDVITEGDGRTSY 78 EHVLPMIPS G+FKDVITEGDGRT Y Sbjct: 630 EHVLPMIPSGGTFKDVITEGDGRTKY 655
BLAST of CD860678 vs. TAIR peptide
Match: AT3G48560.1 (| Symbols: CSR1, ALS, AHAS, TZP5, IMR1 | chlorsulfuron/imidazolinone resistant 1 | chr3:18001530-18003542 REVERSE LENGTH=670) HSP 1 Score: 48.521 bits (114), Expect = 9.979e-7 Identity = 21/26 (80.77%), Postives = 22/26 (84.62%), Query Frame = 1 Query: 1 EHVLPMIPSNGSFKDVITEGDGRTSY 78 EHVLPMIPS G+F DVITEGDGR Y Sbjct: 645 EHVLPMIPSGGTFNDVITEGDGRIKY 670
BLAST of CD860678 vs. TAIR peptide
Match: AT3G48560.1 (| Symbols: CSR1, ALS, AHAS, TZP5, IMR1 | chlorsulfuron/imidazolinone resistant 1 | chr3:18001530-18003542 REVERSE LENGTH=670) HSP 1 Score: 48.521 bits (114), Expect = 9.979e-7 Identity = 21/26 (80.77%), Postives = 22/26 (84.62%), Query Frame = 1 Query: 1 EHVLPMIPSNGSFKDVITEGDGRTSY 78 EHVLPMIPS G+F DVITEGDGR Y Sbjct: 645 EHVLPMIPSGGTFNDVITEGDGRIKY 670
BLAST of CD860678 vs. Lotus protein
Match: LjSGA_010045.1 (+ phase: 0 ) HSP 1 Score: 55.4546 bits (132), Expect = 5.391e-9 Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 1 Query: 1 EHVLPMIPSNGSFKDVITEGDGRTSY 78 EHVLPMIPSNGSFKDVITEGDGR SY Sbjct: 629 EHVLPMIPSNGSFKDVITEGDGRRSY 654
BLAST of CD860678 vs. Lotus protein
Match: chr6.CM0336.250.r2.m (+ phase: 1 /pseudo) HSP 1 Score: 55.0694 bits (131), Expect = 7.040e-9 Identity = 24/26 (92.31%), Postives = 26/26 (100.00%), Query Frame = 1 Query: 1 EHVLPMIPSNGSFKDVITEGDGRTSY 78 EHVLPMIPSNG+F+DVITEGDGRTSY Sbjct: 49 EHVLPMIPSNGTFQDVITEGDGRTSY 74
BLAST of CD860678 vs. Lotus protein
Match: chr6.CM0336.210.r2.m (+ phase: 0 ) HSP 1 Score: 52.7582 bits (125), Expect = 3.494e-8 Identity = 23/26 (88.46%), Postives = 25/26 (96.15%), Query Frame = 1 Query: 1 EHVLPMIPSNGSFKDVITEGDGRTSY 78 EHVLPMIPSNG+F+DVITEGDGR SY Sbjct: 631 EHVLPMIPSNGTFQDVITEGDGRRSY 656
BLAST of CD860678 vs. Soybean peptides
Match: Glyma06g17790.1|PACid:16263325 () HSP 1 Score: 55.8398 bits (133), Expect = 9.799e-9 Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 1 Query: 1 EHVLPMIPSNGSFKDVITEGDGRTSY 78 EHVLPMIPSNGSFKDVITEGDGRT Y Sbjct: 620 EHVLPMIPSNGSFKDVITEGDGRTRY 645
BLAST of CD860678 vs. Soybean peptides
Match: Glyma04g37270.1|PACid:16257026 () HSP 1 Score: 55.8398 bits (133), Expect = 9.799e-9 Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 1 Query: 1 EHVLPMIPSNGSFKDVITEGDGRTSY 78 EHVLPMIPSNGSFKDVITEGDGRT Y Sbjct: 616 EHVLPMIPSNGSFKDVITEGDGRTRY 641
BLAST of CD860678 vs. Soybean peptides
Match: Glyma15g07860.1|PACid:16298012 () HSP 1 Score: 55.0694 bits (131), Expect = 1.672e-8 Identity = 24/26 (92.31%), Postives = 26/26 (100.00%), Query Frame = 1 Query: 1 EHVLPMIPSNGSFKDVITEGDGRTSY 78 EHVLPMIPSNG+F+DVITEGDGRTSY Sbjct: 628 EHVLPMIPSNGTFQDVITEGDGRTSY 653
BLAST of CD860678 vs. Soybean peptides
Match: Glyma13g31470.1|PACid:16292250 () HSP 1 Score: 55.0694 bits (131), Expect = 1.672e-8 Identity = 24/26 (92.31%), Postives = 26/26 (100.00%), Query Frame = 1 Query: 1 EHVLPMIPSNGSFKDVITEGDGRTSY 78 EHVLPMIPSNG+F+DVITEGDGRTSY Sbjct: 620 EHVLPMIPSNGTFQDVITEGDGRTSY 645
BLAST of CD860678 vs. SwissProt
Match: ILVB3_BRANA (Acetolactate synthase 3, chloroplastic OS=Brassica napus PE=3 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 6.770e-7 Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 1 Query: 1 EHVLPMIPSNGSFKDVITEGDGRTSY 78 EHVLPMIPS G+FKDVITEGDGRT Y Sbjct: 627 EHVLPMIPSGGTFKDVITEGDGRTKY 652
BLAST of CD860678 vs. SwissProt
Match: ILVB2_TOBAC (Acetolactate synthase 2, chloroplastic OS=Nicotiana tabacum GN=ALS SURB PE=1 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 6.770e-7 Identity = 23/26 (88.46%), Postives = 25/26 (96.15%), Query Frame = 1 Query: 1 EHVLPMIPSNGSFKDVITEGDGRTSY 78 EHVLPMIPS G+FKDVITEGDGR+SY Sbjct: 639 EHVLPMIPSGGAFKDVITEGDGRSSY 664
BLAST of CD860678 vs. SwissProt
Match: ILVB1_TOBAC (Acetolactate synthase 1, chloroplastic OS=Nicotiana tabacum GN=ALS SURA PE=1 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 6.770e-7 Identity = 23/26 (88.46%), Postives = 25/26 (96.15%), Query Frame = 1 Query: 1 EHVLPMIPSNGSFKDVITEGDGRTSY 78 EHVLPMIPS G+FKDVITEGDGR+SY Sbjct: 642 EHVLPMIPSGGAFKDVITEGDGRSSY 667
BLAST of CD860678 vs. SwissProt
Match: ILVB1_BRANA (Acetolactate synthase 1, chloroplastic OS=Brassica napus PE=3 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 6.770e-7 Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 1 Query: 1 EHVLPMIPSNGSFKDVITEGDGRTSY 78 EHVLPMIPS G+FKDVITEGDGRT Y Sbjct: 630 EHVLPMIPSGGTFKDVITEGDGRTKY 655
BLAST of CD860678 vs. Medicago proteins
Match: IMGA|Medtr3g099190.1 (Acetolactate synthase (AHRD V1 **** B0FBK5_MEDTR); contains Interpro domain(s) IPR000399 TPP-binding enzymes, conserved site IPR012846 Acetolactate synthase, large subunit, biosynthetic chr03_pseudomolecule_IMGAG_V3.5 34532512-34534926 E EGN_Mt100125 20100825) HSP 1 Score: 55.4546 bits (132), Expect = 7.800e-9 Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 1 Query: 1 EHVLPMIPSNGSFKDVITEGDGRTSY 78 EHVLPMIPSNGSFKDVITEGDGR SY Sbjct: 626 EHVLPMIPSNGSFKDVITEGDGRRSY 651
BLAST of CD860678 vs. Medicago proteins
Match: IMGA|Medtr2g013120.1 (Acetolactate synthase 3, chloroplastic (AHRD V1 **** P27819); contains Interpro domain(s) IPR000399 TPP-binding enzymes, conserved site IPR012846 Acetolactate synthase, large subunit, biosynthetic chr02_pseudomolecule_IMGAG_V3.5 3658828-3661079 F EGN_Mt100125 20100825) HSP 1 Score: 52.7582 bits (125), Expect = 5.056e-8 Identity = 23/26 (88.46%), Postives = 25/26 (96.15%), Query Frame = 1 Query: 1 EHVLPMIPSNGSFKDVITEGDGRTSY 78 EHVLPMIP+NGSF+DVITEGDGR SY Sbjct: 630 EHVLPMIPANGSFEDVITEGDGRISY 655 The following BLAST results are available for this feature:
BLAST of CD860678 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 4
BLAST of CD860678 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
BLAST of CD860678 vs. TAIR peptide
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs TAIR 10 peptide) Total hits: 1
BLAST of CD860678 vs. Lotus protein
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Lotus proteins) Total hits: 3
BLAST of CD860678 vs. Soybean peptides
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides) Total hits: 4
BLAST of CD860678 vs. SwissProt
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Swissprot) Total hits: 4
BLAST of CD860678 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CD860678 ID=CD860678; Name=CD860678; organism=Pisum sativum; type=EST; length=123bpback to top |