EX569838

EST Overview


Name	EX569838
Unique Name	EX569838
Type	EST
Organism	Pisum sativum (pea)
Sequence length	535

Libraries


Library Name	Type
LIBEST_021973 Pisum sativum shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
KEGG analysis for Pisum sativum unigene v1	2011-01-05
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of EX569838 vs. TrEMBL
Match: B9HG97_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_562066 PE=4 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.651e-21
Identity = 57/93 (61.29%), Postives = 61/93 (65.59%), Query Frame = 2

Query:    5 RHMPLDSIDPSLAIGFYCRDKDDFDDFCSRAIKLAEESNGAPLFTVAXXXXXXXXXXXXXXXGDNTMFDDDSLGTNLDNDAG--TNEDDWQFL 277
            RH+PLD IDPSLAIGFYCRDKDDFDDFCS A KLA+ESNGAPLFTVA                 + + DDD LG    NDA    NEDDWQ L
Sbjct:  396 RHIPLDLIDPSLAIGFYCRDKDDFDDFCSLASKLADESNGAPLFTVA-------NSYKSSKHDSSEVRDDDPLGVMTMNDAEGCLNEDDWQLL 481

[Close]

BLAST of EX569838 vs. TrEMBL
Match: B9N8L2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1117881 PE=4 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.174e-19
Identity = 54/93 (58.06%), Postives = 58/93 (62.37%), Query Frame = 2

Query:    5 RHMPLDSIDPSLAIGFYCRDKDDFDDFCSRAIKLAEESNGAPLFTVAXXXXXXXXXXXXXXXGDNTMFDDDSLGTNLDNDAG--TNEDDWQFL 277
            RHMPLD IDPSLAIGFYCRDKDDFDDFC+ A KL +ESNGAPLFTVA                   +  DDSLG    ND     +EDDWQ L
Sbjct:  397 RHMPLDLIDPSLAIGFYCRDKDDFDDFCTLASKLTDESNGAPLFTVA-------HSRKLLKHDSGEVRSDDSLGVMTMNDVEGCVHEDDWQLL 482

[Close]

BLAST of EX569838 vs. TrEMBL
Match: A5BG31_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021940 PE=4 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.696e-18
Identity = 54/96 (56.25%), Postives = 60/96 (62.50%), Query Frame = 2

Query:    5 RHMPLDSIDPSLAIGFYCRDKDDFDDFCSRAIKLAEESNGAPLFTVAXXXXXXXXXXXXXXXGDNTMF-DDDSLGTNLDNDA----GTNEDDWQFL 277
            RH+ LDSIDPSLAIGFYCRDKDDFDDFC RA KLA+ESNGAPLFTVA                D + F +DDS     +  A      +EDDWQ L
Sbjct:  394 RHICLDSIDPSLAIGFYCRDKDDFDDFCIRASKLADESNGAPLFTVAHIHSLPKPISCSDGMDDCSGFREDDSFDVVSNKGAEGYEHEHEDDWQLL 489

[Close]

BLAST of EX569838 vs. TrEMBL
Match: D7TRB8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_215.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00003913001 PE=4 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.934e-18
Identity = 53/96 (55.21%), Postives = 60/96 (62.50%), Query Frame = 2

Query:    5 RHMPLDSIDPSLAIGFYCRDKDDFDDFCSRAIKLAEESNGAPLFTVAXXXXXXXXXXXXXXXGDNTMF-DDDSLGTNLDNDA----GTNEDDWQFL 277
            RH+ LDSIDPSLAIGFYCRDKDDFDDFC RA KLA++SNGAPLFTVA                D + F +DDS     +  A      +EDDWQ L
Sbjct:  391 RHICLDSIDPSLAIGFYCRDKDDFDDFCIRASKLADKSNGAPLFTVAHIHSLPKPISCSDGMDDCSGFREDDSFDVVSNKGAEGYEHEHEDDWQLL 486

[Close]

BLAST of EX569838 vs. TrEMBL
Match: C0LP24_WHEAT (Cysteine proteinase OS=Triticum aestivum GN=ATG4 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.934e-18
Identity = 50/93 (53.76%), Postives = 59/93 (63.44%), Query Frame = 2

Query:    5 RHMPLDSIDPSLAIGFYCRDKDDFDDFCSRAIKLAEESNGAPLFTVAXXXXXXXXXXXXXXXGDNTMFD-DDSLGT-NLDNDAGTNEDDWQFL 277
            R MPLD IDPSLAIGFYCRDKDDFDDFCSRA +LAE++NGAPLFTV                   + +   D++ T +LD    T ED+WQ L
Sbjct:  392 RDMPLDLIDPSLAIGFYCRDKDDFDDFCSRASELAEQANGAPLFTVVQSVQPSKQMYNQDDGSGCSGYGVSDNIDTEDLDGSGETGEDEWQIL 484

[Close]

BLAST of EX569838 vs. TrEMBL
Match: D7LKW2_ARALY (Autophagy 4a OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_903821 PE=4 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.099e-17
Identity = 45/91 (49.45%), Postives = 59/91 (64.84%), Query Frame = 2

Query:    5 RHMPLDSIDPSLAIGFYCRDKDDFDDFCSRAIKLAEESNGAPLFTVAXXXXXXXXXXXXXXXGDNTMFDDDSLGTNLDNDAGTNEDDWQFL 277
            R++PL+S+DPSLA+GFYCRDKDDFDDFC RA KLAE+SNGAPLFT+                  ++  + ++ G + D+     EDDWQ L
Sbjct:  392 RYVPLESLDPSLALGFYCRDKDDFDDFCLRASKLAEDSNGAPLFTITQ---------------THSAINQNNYGFSDDDSEDEREDDWQML 467

[Close]

BLAST of EX569838 vs. TrEMBL
Match: C0LP25_WHEAT (Cysteine proteinase OS=Triticum aestivum GN=ATG4.2 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.177e-17
Identity = 48/93 (51.61%), Postives = 56/93 (60.22%), Query Frame = 2

Query:    5 RHMPLDSIDPSLAIGFYCRDKDDFDDFCSRAIKLAEESNGAPLFTVAXXXXXXXXXXXXXXXGDNTMF--DDDSLGTNLDNDAGTNEDDWQFL 277
            R MPLD IDPSLAIGFYCRDKDDFDDFCSRA +LAE++NGAPLFTV                   + +    +    +LD    T ED+WQ L
Sbjct:  394 RDMPLDLIDPSLAIGFYCRDKDDFDDFCSRASELAEQANGAPLFTVVQSVQPSKQMYNRDDGSGCSGYGVSGNIDAEDLDGSGETGEDEWQIL 486

[Close]

BLAST of EX569838 vs. TrEMBL
Match: B9STA6_RICCO (Cysteine protease ATG4B, putative OS=Ricinus communis GN=RCOM_0365260 PE=4 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.455e-17
Identity = 50/98 (51.02%), Postives = 62/98 (63.27%), Query Frame = 2

Query:    5 RHMPLDSIDPSLAIGFYCRDKDDFDDFCSRAIKLAEESNGAPLFTVAXXXXXXXXXXXXXXXG--DNTMFDDDSLGTNL--DNDA---GTNEDDWQFL 277
            RH+PL SIDPSLAIGFYCRDKDDFD+FC  A KLA++S GAPLFTVA                  D+ + +DDS+   +  ++DA   G  ED+WQ L
Sbjct:  392 RHIPLHSIDPSLAIGFYCRDKDDFDEFCLLASKLADDSQGAPLFTVAHCHKLPKPVSHGDMLNNEDDEVQEDDSVNVMMPVNDDAEGGGAQEDEWQLL 489

[Close]

BLAST of EX569838 vs. TrEMBL
Match: B7F9Q9_ORYSJ (cDNA, clone: J090067L13, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.029e-15
Identity = 46/92 (50.00%), Postives = 55/92 (59.78%), Query Frame = 2

Query:    5 RHMPLDSIDPSLAIGFYCRDKDDFDDFCSRAIKLAEESNGAPLFTVAXXXXXXXXXXXXXXXGDNTMFDDDSLGT-NLDNDAGTNEDDWQFL 277
            R + LD IDPSLAIGFYCRDKDDFDDFCSRA +L +++NGAPLFTV                  + M   DS+    LD    T E++WQ L
Sbjct:  386 RDLALDLIDPSLAIGFYCRDKDDFDDFCSRASELVDKANGAPLFTVVQSVQPSKQMYNEESSSGDGM---DSINVEGLDGSGETGEEEWQIL 474

[Close]

BLAST of EX569838 vs. TrEMBL
Match: D7LWJ3_ARALY (Autophagy 4b OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_486460 PE=4 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.106e-15
Identity = 44/91 (48.35%), Postives = 55/91 (60.44%), Query Frame = 2

Query:    5 RHMPLDSIDPSLAIGFYCRDKDDFDDFCSRAIKLAEESNGAPLFTVAXXXXXXXXXXXXXXXGDNTMFDDDSLGTNLDNDAGTNEDDWQFL 277
            R++PL+S+DPSLA+GFYC+DKDDFDDFC RA KLA +SNGAPLFTV                G         + T +  +   +EDDWQ L
Sbjct:  395 RYVPLESLDPSLALGFYCQDKDDFDDFCIRATKLAGDSNGAPLFTVT-------QSHRTNDCGIAETSSSTVISTEISGE--EHEDDWQLL 476

[Close]

BLAST of EX569838 vs. SwissProt
Match: ATG4_MEDTR (Cysteine protease ATG4 OS=Medicago truncatula GN=ATG4 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 9.514e-31
Identity = 69/93 (74.19%), Postives = 71/93 (76.34%), Query Frame = 2

Query:    2 SRHMPLDSIDPSLAIGFYCRDKDDFDDFCSRAIKLAEESNGAPLFTVAXXXXXXXXXXXXXXXGDNTMF-DDDSLGTNLDNDAGTNEDDWQFL 277
            SRHMPLDSIDPSLAIGFYCRDKDDFDDFCSRA KLAEESNGAPLFTVA               GD+T F +DDSL  NL NDAG NEDDWQFL
Sbjct:  396 SRHMPLDSIDPSLAIGFYCRDKDDFDDFCSRATKLAEESNGAPLFTVAQSRSLPMQVTSNSVSGDDTRFEEDDSLSMNLVNDAG-NEDDWQFL 487

[Close]

BLAST of EX569838 vs. SwissProt
Match: ATG4A_ARATH (Cysteine protease ATG4a OS=Arabidopsis thaliana GN=ATG4A PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 9.868e-20
Identity = 48/91 (52.75%), Postives = 58/91 (63.74%), Query Frame = 2

Query:    5 RHMPLDSIDPSLAIGFYCRDKDDFDDFCSRAIKLAEESNGAPLFTVAXXXXXXXXXXXXXXXGDNTMFDDDSLGTNLDNDAGTNEDDWQFL 277
            R++PL+S+DPSLA+GFYCRDKDDFDDFC RA+KLAEESNGAPLFTV                  +T  +  + G   D+     EDDWQ L
Sbjct:  392 RYVPLESLDPSLALGFYCRDKDDFDDFCLRALKLAEESNGAPLFTVTQ---------------THTAINQSNYGFADDDSEDEREDDWQML 467

[Close]

BLAST of EX569838 vs. SwissProt
Match: ATG4A_ORYSJ (Cysteine protease ATG4A OS=Oryza sativa subsp. japonica GN=ATG4A PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 7.819e-17
Identity = 46/92 (50.00%), Postives = 55/92 (59.78%), Query Frame = 2

Query:    5 RHMPLDSIDPSLAIGFYCRDKDDFDDFCSRAIKLAEESNGAPLFTVAXXXXXXXXXXXXXXXGDNTMFDDDSLGT-NLDNDAGTNEDDWQFL 277
            R + LD IDPSLAIGFYCRDKDDFDDFCSRA +L +++NGAPLFTV                  + M   DS+    LD    T E++WQ L
Sbjct:  386 RDLALDLIDPSLAIGFYCRDKDDFDDFCSRASELVDKANGAPLFTVVQSVQPSKQMYNEESSSGDGM---DSINVEGLDGSGETGEEEWQIL 474

[Close]

BLAST of EX569838 vs. SwissProt
Match: ATG4B_ORYSJ (Cysteine protease ATG4B OS=Oryza sativa subsp. japonica GN=ATG4B PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.881e-16
Identity = 48/101 (47.52%), Postives = 58/101 (57.43%), Query Frame = 2

Query:    5 RHMPLDSIDPSLAIGFYCRDKDDFDDFCSRAIKLAEESNGAPLFTVAXXXXXXXXXXXXXXXGDNTMFD-DDSLG---------TNLDNDAGTNEDDWQFL 277
            R + LD IDPSLAIGFYCRDKDDFDDFCSRA +L +++NGAPLFTV                    M++ DD LG          +LD    T E++WQ L
Sbjct:  389 RDLALDLIDPSLAIGFYCRDKDDFDDFCSRATELVDKANGAPLFTVVQSVQP-----------SKQMYNQDDVLGISGDGNINVEDLDASGETGEEEWQIL 478

[Close]

BLAST of EX569838 vs. SwissProt
Match: ATG4B_ORYSI (Cysteine protease ATG4B OS=Oryza sativa subsp. indica GN=ATG4B PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 3.881e-16
Identity = 48/101 (47.52%), Postives = 58/101 (57.43%), Query Frame = 2

Query:    5 RHMPLDSIDPSLAIGFYCRDKDDFDDFCSRAIKLAEESNGAPLFTVAXXXXXXXXXXXXXXXGDNTMFD-DDSLG---------TNLDNDAGTNEDDWQFL 277
            R + LD IDPSLAIGFYCRDKDDFDDFCSRA +L +++NGAPLFTV                    M++ DD LG          +LD    T E++WQ L
Sbjct:  389 RDLALDLIDPSLAIGFYCRDKDDFDDFCSRATELVDKANGAPLFTVVQSVQP-----------SKQMYNQDDVLGISGDGNINVEDLDASGETGEEEWQIL 478

[Close]

BLAST of EX569838 vs. SwissProt
Match: ATG4A_ORYSI (Cysteine protease ATG4A OS=Oryza sativa subsp. indica GN=ATG4A PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.881e-16
Identity = 45/91 (49.45%), Postives = 53/91 (58.24%), Query Frame = 2

Query:    5 RHMPLDSIDPSLAIGFYCRDKDDFDDFCSRAIKLAEESNGAPLFTVAXXXXXXXXXXXXXXXGDNTMFDDDSLGTNLDNDAGTNEDDWQFL 277
            R + LD IDPSLAIGFYCRDKDDFDDFCSRA +L +++NGAPLFTV                  + M  D      LD    T E++WQ L
Sbjct:  385 RDLALDLIDPSLAIGFYCRDKDDFDDFCSRASELVDKANGAPLFTVMQSVQPSKQMYNEESSSGDGM--DIINVEGLDGSGETGEEEWQIL 473

[Close]

BLAST of EX569838 vs. SwissProt
Match: ATG4B_ARATH (Cysteine protease ATG4b OS=Arabidopsis thaliana GN=ATG4B PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 8.645e-16
Identity = 43/91 (47.25%), Postives = 53/91 (58.24%), Query Frame = 2

Query:    5 RHMPLDSIDPSLAIGFYCRDKDDFDDFCSRAIKLAEESNGAPLFTVAXXXXXXXXXXXXXXXGDNTMFDDDSLGTNLDNDAGTNEDDWQFL 277
            R++PL+S+DPSLA+GFYC+ KDDFDDFC RA KLA +SNGAPLFTV                         S  T+ +     +EDDWQ L
Sbjct:  396 RYVPLESLDPSLALGFYCQHKDDFDDFCIRATKLAGDSNGAPLFTVTQSHRRNDCGIAE---------TSSSTETSTEISGEEHEDDWQLL 477

[Close]

BLAST of EX569838 vs. TAIR peptide
Match: AT2G44140.2 (| Symbols: | Peptidase family C54 protein | chr2:18255106-18257206 REVERSE LENGTH=422)

HSP 1 Score: 96.2857 bits (238), Expect = 1.078e-20
Identity = 48/91 (52.75%), Postives = 58/91 (63.74%), Query Frame = 2

Query:    5 RHMPLDSIDPSLAIGFYCRDKDDFDDFCSRAIKLAEESNGAPLFTVAXXXXXXXXXXXXXXXGDNTMFDDDSLGTNLDNDAGTNEDDWQFL 277
            R++PL+S+DPSLA+GFYCRDKDDFDDFC RA+KLAEESNGAPLFTV                  +T  +  + G   D+     EDDWQ L
Sbjct:  347 RYVPLESLDPSLALGFYCRDKDDFDDFCLRALKLAEESNGAPLFTVTQ---------------THTAINQSNYGFADDDSEDEREDDWQML 422

[Close]

BLAST of EX569838 vs. TAIR peptide
Match: AT2G44140.1 (| Symbols: | Peptidase family C54 protein | chr2:18255106-18257165 REVERSE LENGTH=467)

HSP 1 Score: 96.2857 bits (238), Expect = 1.078e-20
Identity = 48/91 (52.75%), Postives = 58/91 (63.74%), Query Frame = 2

Query:    5 RHMPLDSIDPSLAIGFYCRDKDDFDDFCSRAIKLAEESNGAPLFTVAXXXXXXXXXXXXXXXGDNTMFDDDSLGTNLDNDAGTNEDDWQFL 277
            R++PL+S+DPSLA+GFYCRDKDDFDDFC RA+KLAEESNGAPLFTV                  +T  +  + G   D+     EDDWQ L
Sbjct:  392 RYVPLESLDPSLALGFYCRDKDDFDDFCLRALKLAEESNGAPLFTVTQ---------------THTAINQSNYGFADDDSEDEREDDWQML 467

[Close]

BLAST of EX569838 vs. TAIR peptide
Match: AT3G59950.1 (| Symbols: | Peptidase family C54 protein | chr3:22144468-22146887 REVERSE LENGTH=477)

HSP 1 Score: 83.1889 bits (204), Expect = 9.445e-17
Identity = 43/91 (47.25%), Postives = 53/91 (58.24%), Query Frame = 2

Query:    5 RHMPLDSIDPSLAIGFYCRDKDDFDDFCSRAIKLAEESNGAPLFTVAXXXXXXXXXXXXXXXGDNTMFDDDSLGTNLDNDAGTNEDDWQFL 277
            R++PL+S+DPSLA+GFYC+ KDDFDDFC RA KLA +SNGAPLFTV                         S  T+ +     +EDDWQ L
Sbjct:  396 RYVPLESLDPSLALGFYCQHKDDFDDFCIRATKLAGDSNGAPLFTVTQSHRRNDCGIAE---------TSSSTETSTEISGEEHEDDWQLL 477

The following BLAST results are available for this feature:

BLAST of EX569838 vs. TrEMBL
BLAST of EX569838 vs. SwissProt
BLAST of EX569838 vs. TAIR peptide

BLAST of EX569838 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9HG97_POPTR	3.651e-21	61.29	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9N8L2_POPTR	1.174e-19	58.06	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A5BG31_VITVI	1.696e-18	56.25	Putative uncharacterized protein OS=Vitis vinifera...	[more]
D7TRB8_VITVI	4.934e-18	55.21	Whole genome shotgun sequence of line PN40024, sca...	[more]
C0LP24_WHEAT	4.934e-18	53.76	Cysteine proteinase OS=Triticum aestivum GN=ATG4 P...	[more]
D7LKW2_ARALY	1.099e-17	49.45	Autophagy 4a OS=Arabidopsis lyrata subsp. lyrata G...	[more]
C0LP25_WHEAT	4.177e-17	51.61	Cysteine proteinase OS=Triticum aestivum GN=ATG4.2...	[more]
B9STA6_RICCO	5.455e-17	51.02	Cysteine protease ATG4B, putative OS=Ricinus commu...	[more]
B7F9Q9_ORYSJ	1.029e-15	50.00	cDNA, clone: J090067L13, full insert sequence OS=O...	[more]
D7LWJ3_ARALY	5.106e-15	48.35	Autophagy 4b OS=Arabidopsis lyrata subsp. lyrata G...	[more]

BLAST of EX569838 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 7


Match Name	E-value	Identity	Description
ATG4_MEDTR	9.514e-31	74.19	Cysteine protease ATG4 OS=Medicago truncatula GN=A...	[more]
ATG4A_ARATH	9.868e-20	52.75	Cysteine protease ATG4a OS=Arabidopsis thaliana GN...	[more]
ATG4A_ORYSJ	7.819e-17	50.00	Cysteine protease ATG4A OS=Oryza sativa subsp. jap...	[more]
ATG4B_ORYSJ	3.881e-16	47.52	Cysteine protease ATG4B OS=Oryza sativa subsp. jap...	[more]
ATG4B_ORYSI	3.881e-16	47.52	Cysteine protease ATG4B OS=Oryza sativa subsp. ind...	[more]
ATG4A_ORYSI	3.881e-16	49.45	Cysteine protease ATG4A OS=Oryza sativa subsp. ind...	[more]
ATG4B_ARATH	8.645e-16	47.25	Cysteine protease ATG4b OS=Arabidopsis thaliana GN...	[more]

BLAST of EX569838 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT2G44140.2	1.078e-20	52.75	\| Symbols: \| Peptidase family C54 protein \| chr2:...	[more]
AT2G44140.1	1.078e-20	52.75	\| Symbols: \| Peptidase family C54 protein \| chr2:...	[more]
AT3G59950.1	9.445e-17	47.25	\| Symbols: \| Peptidase family C54 protein \| chr3:...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005078	Peptidase C54	PANTHER	PTHR22624	APG4 AUTOPHAGY 4-RELATED	coord: 2..92 score: 1.7
IPR005078	Peptidase C54	PFAM	PF03416	Peptidase_C54	coord: 2..31 score: 1.2
None	No IPR available	PANTHER	PTHR22624:SF7	AUTOPHAGY 4A	coord: 2..92 score: 1.7
None	No IPR available	SEG	seg	seg	coord: 49..63 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EX569838 ID=EX569838; Name=EX569838; organism=Pisum sativum; type=EST; length=535bp
TAGCAGGCACATGCCCCTAGATTCTATTGACCCATCTTTGGCTATTGGAT
TTTACTGCCGAGACAAAGATGATTTTGACGATTTCTGTTCCCGGGCTATT
AAGCTTGCAGAAGAATCAAATGGTGCACCATTATTCACGGTAGCTCAATC
CAGGAGTCTCTCAATTCAAGTCACAAGTAGTTCTGTGTCAGGTGACAACA
CTATGTTTGACGATGATTCTCTTGGTACGAACCTCGACAACGATGCAGGC
ACCAATGAGGATGACTGGCAATTCCTATAAATCCTGCAATATACAGTATG
GAGTTAAGTAGGGGATTGTTGCTTGATTCTCAAGACTATTTACCACTGGC
GAGTTTGGTTGATGCTCGTCTTCATACTCGCACTCTCGAAACGTTGTTTG
GTAGCTTGTAGGAATTTAAACTCATTGTGATTCTTTGGCTTAAATTGCTT
AGACATTTGTTGATATGGCTAACTAGGTATTTATTGTACATTAAACTAGT
TCGTTCATATTTGTTGATGTATCCTTTTATTGGCT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR005078	Peptidase_C54

Search form