FG529043

EST Overview


Name	FG529043
Unique Name	FG529043
Type	EST
Organism	Pisum sativum (pea)
Sequence length	530

Libraries


Library Name	Type
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTs	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of FG529043 vs. TrEMBL
Match: C5X4C7_SORBI (Putative uncharacterized protein Sb02g009800 OS=Sorghum bicolor GN=Sb02g009800 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.928e-11
Identity = 38/54 (70.37%), Postives = 39/54 (72.22%), Query Frame = 2

Query:    2 IRDFLIQSKEFSAQDNKDLYXXXXXXXXXXXXXXMLSIPGLIAPIELQDEMVDS 163
            IRDFL+QSKEFSAQDNKDLY              MLSIPGLIAP ELQDEMVDS
Sbjct: 1019 IRDFLVQSKEFSAQDNKDLYAEEAAAQREKERQRMLSIPGLIAPNELQDEMVDS 1072

[Close]

BLAST of FG529043 vs. TrEMBL
Match: A9S636_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_163030 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.928e-11
Identity = 36/54 (66.67%), Postives = 40/54 (74.07%), Query Frame = 2

Query:    2 IRDFLIQSKEFSAQDNKDLYXXXXXXXXXXXXXXMLSIPGLIAPIELQDEMVDS 163
            +RDFLIQSKEFSAQDNKDLY              MLSIPGLIAPIE+QDEM+D+
Sbjct: 1015 LRDFLIQSKEFSAQDNKDLYAEEAAVQREAERRRMLSIPGLIAPIEIQDEMIDT 1068

[Close]

BLAST of FG529043 vs. TrEMBL
Match: Q9SMV6_ARATH (Exportin1 (XPO1) protein OS=Arabidopsis thaliana GN=xpo1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.288e-11
Identity = 37/54 (68.52%), Postives = 39/54 (72.22%), Query Frame = 2

Query:    2 IRDFLIQSKEFSAQDNKDLYXXXXXXXXXXXXXXMLSIPGLIAPIELQDEMVDS 163
            IRDFL+QSKEFSAQDNKDLY              MLSIPGLIAP E+QDEMVDS
Sbjct: 1022 IRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPNEIQDEMVDS 1075

[Close]

BLAST of FG529043 vs. TrEMBL
Match: Q84M87_ORYSJ (Os03g0858100 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0059G06.10 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.288e-11
Identity = 37/54 (68.52%), Postives = 39/54 (72.22%), Query Frame = 2

Query:    2 IRDFLIQSKEFSAQDNKDLYXXXXXXXXXXXXXXMLSIPGLIAPIELQDEMVDS 163
            IRDFL+QSKEFSAQDNKDLY              ML+IPGLIAP ELQDEMVDS
Sbjct: 1017 IRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLAIPGLIAPSELQDEMVDS 1070

[Close]

BLAST of FG529043 vs. TrEMBL
Match: D7LWW2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_909689 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.288e-11
Identity = 37/54 (68.52%), Postives = 39/54 (72.22%), Query Frame = 2

Query:    2 IRDFLIQSKEFSAQDNKDLYXXXXXXXXXXXXXXMLSIPGLIAPIELQDEMVDS 163
            IRDFL+QSKEFSAQDNKDLY              MLSIPGLIAP E+QDEMVDS
Sbjct: 1023 IRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPNEIQDEMVDS 1076

[Close]

BLAST of FG529043 vs. TrEMBL
Match: C5WRW8_SORBI (Putative uncharacterized protein Sb01g000490 OS=Sorghum bicolor GN=Sb01g000490 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.288e-11
Identity = 37/54 (68.52%), Postives = 39/54 (72.22%), Query Frame = 2

Query:    2 IRDFLIQSKEFSAQDNKDLYXXXXXXXXXXXXXXMLSIPGLIAPIELQDEMVDS 163
            IRDFL+QSKEFSAQDNKDLY              ML+IPGLIAP ELQDEMVDS
Sbjct: 1018 IRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLAIPGLIAPSELQDEMVDS 1071

[Close]

BLAST of FG529043 vs. TrEMBL
Match: B8ANT1_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14413 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.288e-11
Identity = 37/54 (68.52%), Postives = 39/54 (72.22%), Query Frame = 2

Query:    2 IRDFLIQSKEFSAQDNKDLYXXXXXXXXXXXXXXMLSIPGLIAPIELQDEMVDS 163
            IRDFL+QSKEFSAQDNKDLY              ML+IPGLIAP ELQDEMVDS
Sbjct:  237 IRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLAIPGLIAPSELQDEMVDS 290

[Close]

BLAST of FG529043 vs. TrEMBL
Match: A3AHY0_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_10847 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.288e-11
Identity = 37/54 (68.52%), Postives = 39/54 (72.22%), Query Frame = 2

Query:    2 IRDFLIQSKEFSAQDNKDLYXXXXXXXXXXXXXXMLSIPGLIAPIELQDEMVDS 163
            IRDFL+QSKEFSAQDNKDLY              ML+IPGLIAP ELQDEMVDS
Sbjct:  981 IRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLAIPGLIAPSELQDEMVDS 1034

[Close]

BLAST of FG529043 vs. TrEMBL
Match: B9S1Z9_RICCO (Chromosome region maintenance protein 1/exportin, putative OS=Ricinus communis GN=RCOM_1324510 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.325e-11
Identity = 36/54 (66.67%), Postives = 39/54 (72.22%), Query Frame = 2

Query:    2 IRDFLIQSKEFSAQDNKDLYXXXXXXXXXXXXXXMLSIPGLIAPIELQDEMVDS 163
            IRDFL+QSKEFSAQDNKDLY              MLSIPGLIAP E+QDEM+DS
Sbjct: 1016 IRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPNEIQDEMLDS 1069

[Close]

BLAST of FG529043 vs. TrEMBL
Match: B9IQ04_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_780400 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.325e-11
Identity = 36/54 (66.67%), Postives = 39/54 (72.22%), Query Frame = 2

Query:    2 IRDFLIQSKEFSAQDNKDLYXXXXXXXXXXXXXXMLSIPGLIAPIELQDEMVDS 163
            IRDFL+QSKEFSAQDNKDLY              MLSIPGLIAP E+QDEM+DS
Sbjct: 1023 IRDFLVQSKEFSAQDNKDLYAEEAAVQRERERQRMLSIPGLIAPNEIQDEMLDS 1076

[Close]

BLAST of FG529043 vs. TAIR peptide
Match: AT5G17020.2 (| Symbols: XPO1A | exportin 1A | chr5:5594904-5602467 FORWARD LENGTH=1060)

HSP 1 Score: 71.633 bits (174), Expect = 2.776e-13
Identity = 37/54 (68.52%), Postives = 39/54 (72.22%), Query Frame = 2

Query:    2 IRDFLIQSKEFSAQDNKDLYXXXXXXXXXXXXXXMLSIPGLIAPIELQDEMVDS 163
            IRDFL+QSKEFSAQDNKDLY              MLSIPGLIAP E+QDEMVDS
Sbjct: 1007 IRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPNEIQDEMVDS 1060

[Close]

BLAST of FG529043 vs. TAIR peptide
Match: AT5G17020.1 (| Symbols: XPO1A, ATCRM1, ATXPO1, XPO1, HIT2 | exportin 1A | chr5:5594904-5602467 FORWARD LENGTH=1075)

HSP 1 Score: 71.633 bits (174), Expect = 2.776e-13
Identity = 37/54 (68.52%), Postives = 39/54 (72.22%), Query Frame = 2

Query:    2 IRDFLIQSKEFSAQDNKDLYXXXXXXXXXXXXXXMLSIPGLIAPIELQDEMVDS 163
            IRDFL+QSKEFSAQDNKDLY              MLSIPGLIAP E+QDEMVDS
Sbjct: 1022 IRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPNEIQDEMVDS 1075

[Close]

BLAST of FG529043 vs. TAIR peptide
Match: AT3G03110.1 (| Symbols: XPO1B, CRM1B | exportin 1B | chr3:708966-716879 FORWARD LENGTH=1076)

HSP 1 Score: 69.707 bits (169), Expect = 1.055e-12
Identity = 36/54 (66.67%), Postives = 38/54 (70.37%), Query Frame = 2

Query:    2 IRDFLIQSKEFSAQDNKDLYXXXXXXXXXXXXXXMLSIPGLIAPIELQDEMVDS 163
            IRDFLIQSKEFSAQDNKDLY              MLSIPGLIAP E+QD+M DS
Sbjct: 1023 IRDFLIQSKEFSAQDNKDLYAEEAAAQMERERQRMLSIPGLIAPSEIQDDMADS 1076

The following BLAST results are available for this feature:

BLAST of FG529043 vs. TrEMBL
BLAST of FG529043 vs. TAIR peptide

BLAST of FG529043 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C5X4C7_SORBI	1.928e-11	70.37	Putative uncharacterized protein Sb02g009800 OS=So...	[more]
A9S636_PHYPA	1.928e-11	66.67	Predicted protein OS=Physcomitrella patens subsp. ...	[more]
Q9SMV6_ARATH	3.288e-11	68.52	Exportin1 (XPO1) protein OS=Arabidopsis thaliana G...	[more]
Q84M87_ORYSJ	3.288e-11	68.52	Os03g0858100 protein OS=Oryza sativa subsp. japoni...	[more]
D7LWW2_ARALY	3.288e-11	68.52	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
C5WRW8_SORBI	3.288e-11	68.52	Putative uncharacterized protein Sb01g000490 OS=So...	[more]
B8ANT1_ORYSI	3.288e-11	68.52	Putative uncharacterized protein OS=Oryza sativa s...	[more]
A3AHY0_ORYSJ	3.288e-11	68.52	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B9S1Z9_RICCO	7.325e-11	66.67	Chromosome region maintenance protein 1/exportin, ...	[more]
B9IQ04_POPTR	7.325e-11	66.67	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

BLAST of FG529043 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT5G17020.2	2.776e-13	68.52	\| Symbols: XPO1A \| exportin 1A \| chr5:5594904-5602...	[more]
AT5G17020.1	2.776e-13	68.52	\| Symbols: XPO1A, ATCRM1, ATXPO1, XPO1, HIT2 \| exp...	[more]
AT3G03110.1	1.055e-12	66.67	\| Symbols: XPO1B, CRM1B \| exportin 1B \| chr3:70896...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11223	EXPORTIN 1/5	coord: 1..52 score: 2.6
None	No IPR available	PANTHER	PTHR11223:SF2	EXPORTIN 1 (CHROMOSOME REGION MAINTENANCE PROTEIN 1)	coord: 1..52 score: 2.6
None	No IPR available	SEG	seg	seg	coord: 21..34 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FG529043 ID=FG529043; Name=FG529043; organism=Pisum sativum; type=EST; length=530bp
CATAAGGGATTTTCTTATACAGTCAAAAGAGTTTTCAGCTCAGGATAACA
AAGATCTTTATGCTGAAGAGGCCGCAGCTCAGAGAGAGAGAGAACGGCAA
AGAATGCTTTCTATTCCAGGGCTTATCGCCCCAATTGAGTTGCAAGATGA
AATGGTGGACTCGTAGTTAATAGGCAAGAATCAACATGGTAGAGTAAATA
GCAGGGAGGGCATTTATACTTTAGTTGCAGGTGCAGTGGTTCAAACAGAT
GCAACATTCTCCTCTTTAATATATAGTAACATTATGCACTCTTCCCAATA
TTTCATGTTGGGACTGAGTTTGCAATAGAGATTCCTGATTTCAGAGATTA
TTGGGTGATGAGTGTAGTTTGTTCAGTAACTGATTTAGGGTGAGATACTA
ATACTAGTCTTTAGTAAGTGTTTAGTCAAGGCAACATTCCATAGAATTAT
TCCATTGTTGAGGCTGATTGTGCAGAAAACCCTTGTGGTTTTATTTTGTT
TTTTCATCAATTTATTAATTTTAGAAAAAC

Search form