FG534382

EST Overview
NameFG534382
Unique NameFG534382
TypeEST
OrganismPisum sativum (pea)
Sequence length343
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of FG534382 vs. TrEMBL
Match: B9GFB2_POPTR (Ribosomal protein OS=Populus trichocarpa GN=POPTRDRAFT_1068323 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 4.757e-35
Identity = 69/83 (83.13%), Postives = 79/83 (95.18%), Query Frame = 1
Query:   13 AEFKQGKVEYRADKTGIVHLPFGKADFPEEDLLTNLLSAIKSVDSNKPSGAKGVYWKSAHICSAMGPSVRLNIKEMLDYRLQS 261
            AEFK+GKVEYRADKTGIVH+PFGKADF EEDLL NLL+A+KSV++NKPSGAKGVYWKSAHICS+MGPS+RLN +EMLDY+L S
Sbjct:  271 AEFKKGKVEYRADKTGIVHIPFGKADFSEEDLLVNLLAAVKSVEANKPSGAKGVYWKSAHICSSMGPSIRLNTREMLDYKLPS 353          
BLAST of FG534382 vs. TrEMBL
Match: A9PK56_9ROSI (Ribosomal protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 4.757e-35
Identity = 69/83 (83.13%), Postives = 79/83 (95.18%), Query Frame = 1
Query:   13 AEFKQGKVEYRADKTGIVHLPFGKADFPEEDLLTNLLSAIKSVDSNKPSGAKGVYWKSAHICSAMGPSVRLNIKEMLDYRLQS 261
            AEFK+GKVEYRADKTGIVH+PFGKADF EEDLL NLL+A+KSV++NKPSGAKGVYWKSAHICS+MGPS+RLN +EMLDY+L S
Sbjct:  271 AEFKKGKVEYRADKTGIVHIPFGKADFSEEDLLVNLLAAVKSVEANKPSGAKGVYWKSAHICSSMGPSIRLNTREMLDYKLPS 353          
BLAST of FG534382 vs. TrEMBL
Match: D7T382_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_64.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032196001 PE=4 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.384e-34
Identity = 68/83 (81.93%), Postives = 79/83 (95.18%), Query Frame = 1
Query:   13 AEFKQGKVEYRADKTGIVHLPFGKADFPEEDLLTNLLSAIKSVDSNKPSGAKGVYWKSAHICSAMGPSVRLNIKEMLDYRLQS 261
            AEFK+GKVEYRADKTGIVHLPFGKADF EEDLL NL++A+KSV++NKPSGAKGVYW+SAHICS+MGPS+RLNI+EMLDY+  S
Sbjct:  259 AEFKKGKVEYRADKTGIVHLPFGKADFSEEDLLANLIAAVKSVETNKPSGAKGVYWRSAHICSSMGPSIRLNIREMLDYKSPS 341          
BLAST of FG534382 vs. TrEMBL
Match: B9HNT2_POPTR (Ribosomal protein OS=Populus trichocarpa GN=POPTRDRAFT_833204 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.027e-34
Identity = 67/83 (80.72%), Postives = 78/83 (93.98%), Query Frame = 1
Query:   13 AEFKQGKVEYRADKTGIVHLPFGKADFPEEDLLTNLLSAIKSVDSNKPSGAKGVYWKSAHICSAMGPSVRLNIKEMLDYRLQS 261
            AEFK+GKVEYRADKTGIVH+PFGKADF EEDLL NLL+A+KS ++NKPSGAKGVYWKSAHICS+MGPS+RLN +EML+Y+L S
Sbjct:  245 AEFKRGKVEYRADKTGIVHIPFGKADFSEEDLLVNLLAAVKSAEANKPSGAKGVYWKSAHICSSMGPSIRLNTREMLEYKLPS 327          
BLAST of FG534382 vs. TrEMBL
Match: A9PFW5_POPTR (Ribosomal protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.027e-34
Identity = 67/83 (80.72%), Postives = 78/83 (93.98%), Query Frame = 1
Query:   13 AEFKQGKVEYRADKTGIVHLPFGKADFPEEDLLTNLLSAIKSVDSNKPSGAKGVYWKSAHICSAMGPSVRLNIKEMLDYRLQS 261
            AEFK+GKVEYRADKTGIVH+PFGKADF EEDLL NLL+A+KS ++NKPSGAKGVYWKSAHICS+MGPS+RLN +EML+Y+L S
Sbjct:  271 AEFKRGKVEYRADKTGIVHIPFGKADFSEEDLLVNLLAAVKSAEANKPSGAKGVYWKSAHICSSMGPSIRLNTREMLEYKLPS 353          
BLAST of FG534382 vs. TrEMBL
Match: B9RVK2_RICCO (Ribosomal protein OS=Ricinus communis GN=RCOM_0963900 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 5.259e-34
Identity = 67/83 (80.72%), Postives = 79/83 (95.18%), Query Frame = 1
Query:   13 AEFKQGKVEYRADKTGIVHLPFGKADFPEEDLLTNLLSAIKSVDSNKPSGAKGVYWKSAHICSAMGPSVRLNIKEMLDYRLQS 261
            AEFK+GKVEYRADKTGIVH+PFGKADF E+DLL NL +AIKS+++NKPSGAKGVYWKSAHICS+MGPS+RLNI+EML+Y+L S
Sbjct:  276 AEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLVNLHAAIKSIETNKPSGAKGVYWKSAHICSSMGPSIRLNIREMLEYKLPS 358          
BLAST of FG534382 vs. TrEMBL
Match: A9P244_PICSI (Ribosomal protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 8.397e-32
Identity = 62/83 (74.70%), Postives = 76/83 (91.57%), Query Frame = 1
Query:   13 AEFKQGKVEYRADKTGIVHLPFGKADFPEEDLLTNLLSAIKSVDSNKPSGAKGVYWKSAHICSAMGPSVRLNIKEMLDYRLQS 261
            +EFK+GKVEYRADKTGIVH+PFGK DFPEEDLLTNL++A+ SVD+NKPSGAKGVYWK+AHIC+ MGPS+RL IK+  +++L S
Sbjct:  286 SEFKKGKVEYRADKTGIVHIPFGKTDFPEEDLLTNLIAAVNSVDTNKPSGAKGVYWKTAHICATMGPSIRLIIKDTREFKLPS 368          
BLAST of FG534382 vs. TrEMBL
Match: B6TN03_MAIZE (Ribosomal protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.432e-31
Identity = 59/82 (71.95%), Postives = 75/82 (91.46%), Query Frame = 1
Query:   16 EFKQGKVEYRADKTGIVHLPFGKADFPEEDLLTNLLSAIKSVDSNKPSGAKGVYWKSAHICSAMGPSVRLNIKEMLDYRLQS 261
            EFK+GKVEYR DK+GIVH+PFGK DFPEEDL+ N +S ++SV+ NKPSGAKG+YWK+A++CS+MGPS++LNIKEMLDY L+S
Sbjct:  262 EFKKGKVEYRVDKSGIVHIPFGKVDFPEEDLIANFMSVVRSVERNKPSGAKGIYWKTAYLCSSMGPSIKLNIKEMLDYGLES 343          
BLAST of FG534382 vs. TrEMBL
Match: Q60E59_ORYSJ (Ribosomal protein OS=Oryza sativa subsp. japonica GN=OSJNBa0073E05.17 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.443e-31
Identity = 58/82 (70.73%), Postives = 74/82 (90.24%), Query Frame = 1
Query:   16 EFKQGKVEYRADKTGIVHLPFGKADFPEEDLLTNLLSAIKSVDSNKPSGAKGVYWKSAHICSAMGPSVRLNIKEMLDYRLQS 261
            EFK+GKVEYR DKTGIVH+PFGK DFPEEDL+ N ++ ++SV+ NKPSGAKG+YWK+A++CS+MGPS++LNIKEMLDY  +S
Sbjct:  276 EFKKGKVEYRVDKTGIVHIPFGKVDFPEEDLIANFMAVVRSVERNKPSGAKGIYWKTAYLCSSMGPSIKLNIKEMLDYGSES 357          
BLAST of FG534382 vs. TrEMBL
Match: C5YXG6_SORBI (Ribosomal protein OS=Sorghum bicolor GN=Sb09g019170 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.443e-31
Identity = 58/82 (70.73%), Postives = 74/82 (90.24%), Query Frame = 1
Query:   16 EFKQGKVEYRADKTGIVHLPFGKADFPEEDLLTNLLSAIKSVDSNKPSGAKGVYWKSAHICSAMGPSVRLNIKEMLDYRLQS 261
            EFK+GKVEYR DK+GIVH+PFGK DFPEEDL+ N ++ ++SV+ NKPSGAKG+YWK+A++CS+MGPS++LNIKEMLDY L S
Sbjct:  263 EFKKGKVEYRVDKSGIVHIPFGKVDFPEEDLIANFMAVVRSVERNKPSGAKGIYWKTAYLCSSMGPSIKLNIKEMLDYGLDS 344          
BLAST of FG534382 vs. SwissProt
Match: RK1_ARATH (50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana GN=RPL1 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.516e-32
Identity = 59/79 (74.68%), Postives = 74/79 (93.67%), Query Frame = 1
Query:   16 EFKQGKVEYRADKTGIVHLPFGKADFPEEDLLTNLLSAIKSVDSNKPSGAKGVYWKSAHICSAMGPSVRLNIKEMLDYR 252
            EFK+GKVE+RADKTGIVH+PFGK +F EEDLL N L+A+KSV++NKP GAKGVYWKSAHICS+MGPS++LNI+EM+D++
Sbjct:  263 EFKKGKVEFRADKTGIVHIPFGKVNFTEEDLLINFLAAVKSVETNKPKGAKGVYWKSAHICSSMGPSIKLNIREMIDFK 341          
BLAST of FG534382 vs. SwissProt
Match: RK1_SPIOL (50S ribosomal protein L1, chloroplastic OS=Spinacia oleracea GN=RPL1 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.823e-31
Identity = 60/79 (75.95%), Postives = 72/79 (91.14%), Query Frame = 1
Query:   16 EFKQGKVEYRADKTGIVHLPFGKADFPEEDLLTNLLSAIKSVDSNKPSGAKGVYWKSAHICSAMGPSVRLNIKEMLDYR 252
            EFK+GKVE+R DKTGIVH+PFGK +F EEDLL NL + IKSV++NKP+GAKGVYWKSAHI S+MGPS+RLNI+EMLDY+
Sbjct:  269 EFKKGKVEFRVDKTGIVHIPFGKLNFEEEDLLINLFATIKSVETNKPTGAKGVYWKSAHISSSMGPSIRLNIREMLDYK 347          
BLAST of FG534382 vs. SwissProt
Match: RK1_RHDSA (50S ribosomal protein L1, chloroplastic OS=Rhodomonas salina GN=rpl1 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.720e-23
Identity = 49/77 (63.64%), Postives = 61/77 (79.22%), Query Frame = 1
Query:   16 EFKQGKVEYRADKTGIVHLPFGKADFPEEDLLTNLLSAIKSVDSNKPSGAKGVYWKSAHICSAMGPSVRLNIKEMLD 246
            EFK+GK+EYRADK+GIVH+ FGK DF  EDLL NL +  +S+D N+PSG KG YWKS +ICS MGPS++L+I E  D
Sbjct:  154 EFKKGKLEYRADKSGIVHILFGKTDFSVEDLLANLEAVQESIDKNRPSGVKGRYWKSFYICSTMGPSIQLDISEFRD 230          
BLAST of FG534382 vs. SwissProt
Match: RK1_GUITH (50S ribosomal protein L1, chloroplastic OS=Guillardia theta GN=rpl1 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.456e-22
Identity = 47/81 (58.02%), Postives = 61/81 (75.31%), Query Frame = 1
Query:   16 EFKQGKVEYRADKTGIVHLPFGKADFPEEDLLTNLLSAIKSVDSNKPSGAKGVYWKSAHICSAMGPSVRLNIKEMLDYRLQ 258
            EFK+GK+EYRADK+GIVH+ FGK +F   DLL NL +  +S+D N+P+G KG YWKS +ICS MGPS++L+I E  D   Q
Sbjct:  154 EFKKGKLEYRADKSGIVHISFGKTNFSVNDLLLNLEAVQESIDKNRPAGVKGKYWKSFYICSTMGPSIQLDISEFRDKNFQ 234          
BLAST of FG534382 vs. SwissProt
Match: RK1_PORPU (50S ribosomal protein L1, chloroplastic OS=Porphyra purpurea GN=rpl1 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.484e-22
Identity = 45/76 (59.21%), Postives = 60/76 (78.95%), Query Frame = 1
Query:   16 EFKQGKVEYRADKTGIVHLPFGKADFPEEDLLTNLLSAIKSVDSNKPSGAKGVYWKSAHICSAMGPSVRLNIKEML 243
            EFK GKVEYR D+TGI+H+PFGK+ FPEEDL+ NL +   S+D NKPSG+KG YWK+  + S MGPS++++I  +L
Sbjct:  154 EFKGGKVEYRVDRTGIIHVPFGKSSFPEEDLVMNLQTIKDSIDKNKPSGSKGKYWKTFFLSSTMGPSIQIDITSLL 229          
BLAST of FG534382 vs. SwissProt
Match: RL1_ANAVT (50S ribosomal protein L1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.237e-22
Identity = 45/81 (55.56%), Postives = 64/81 (79.01%), Query Frame = 1
Query:   13 AEFKQGKVEYRADKTGIVHLPFGKADFPEEDLLTNLLSAIKSVDSNKPSGAKGVYWKSAHICSAMGPSVRLNIKEMLDYRL 255
            AEFK GK+E+RAD+TGIVH+ FGKA F  EDLL NL +  +++D N+PSGAKG YW++ ++ + MGPS+R++I  + DY+L
Sbjct:  154 AEFKAGKLEFRADRTGIVHVMFGKASFSPEDLLVNLKALQETIDRNRPSGAKGRYWRTFYVSATMGPSIRVDINALRDYKL 234          
BLAST of FG534382 vs. SwissProt
Match: RL1_ANASP (50S ribosomal protein L1 OS=Anabaena sp. (strain PCC 7120) GN=rplA PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.237e-22
Identity = 45/81 (55.56%), Postives = 64/81 (79.01%), Query Frame = 1
Query:   13 AEFKQGKVEYRADKTGIVHLPFGKADFPEEDLLTNLLSAIKSVDSNKPSGAKGVYWKSAHICSAMGPSVRLNIKEMLDYRL 255
            AEFK GK+E+RAD+TGIVH+ FGKA F  EDLL NL +  +++D N+PSGAKG YW++ ++ + MGPS+R++I  + DY+L
Sbjct:  154 AEFKAGKLEFRADRTGIVHVMFGKASFSPEDLLVNLKALQETIDRNRPSGAKGRYWRTFYVSATMGPSIRVDINALRDYKL 234          
BLAST of FG534382 vs. SwissProt
Match: RL1_SYNJA (50S ribosomal protein L1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rplA PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.227e-22
Identity = 45/80 (56.25%), Postives = 60/80 (75.00%), Query Frame = 1
Query:   16 EFKQGKVEYRADKTGIVHLPFGKADFPEEDLLTNLLSAIKSVDSNKPSGAKGVYWKSAHICSAMGPSVRLNIKEMLDYRL 255
            EFK GK+EYRADKTGIVHL FGK  FP E LL NL +  +S+D N+P GAKG YW++ H+C+ MGPS+ ++I  + + +L
Sbjct:  155 EFKAGKLEYRADKTGIVHLIFGKCKFPVEALLENLKAVQESIDRNRPPGAKGKYWRALHVCATMGPSIEVDINALRELKL 234          
BLAST of FG534382 vs. SwissProt
Match: RL1_MICAN (50S ribosomal protein L1 OS=Microcystis aeruginosa (strain NIES-843) GN=rplA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.233e-21
Identity = 45/81 (55.56%), Postives = 64/81 (79.01%), Query Frame = 1
Query:   13 AEFKQGKVEYRADKTGIVHLPFGKADFPEEDLLTNLLSAIKSVDSNKPSGAKGVYWKSAHICSAMGPSVRLNIKEMLDYRL 255
            AEFK GK+E+RAD+TGIVH+ FGKA F  EDLL NL +  ++VD N+PSGAKG YW++ ++ S+MGPS++++I  + D +L
Sbjct:  154 AEFKAGKLEFRADRTGIVHVQFGKASFSAEDLLVNLKALQETVDRNRPSGAKGRYWRTVYVSSSMGPSIQVDISALRDLKL 234          
BLAST of FG534382 vs. SwissProt
Match: RK1_PORYE (50S ribosomal protein L1, chloroplastic OS=Porphyra yezoensis GN=rpl1 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.610e-21
Identity = 44/76 (57.89%), Postives = 60/76 (78.95%), Query Frame = 1
Query:   16 EFKQGKVEYRADKTGIVHLPFGKADFPEEDLLTNLLSAIKSVDSNKPSGAKGVYWKSAHICSAMGPSVRLNIKEML 243
            EFK GKVEYR D+TGI+H+PFGK+ F +EDL+ NL +  +S+D NKPSGAKG YWK+  + S MGPS++++I  +L
Sbjct:  154 EFKGGKVEYRVDRTGIIHVPFGKSSFSQEDLVLNLQTIKESIDRNKPSGAKGKYWKTFFLSSTMGPSIQIDITSLL 229          
BLAST of FG534382 vs. TAIR peptide
Match: AT3G63490.1 (| Symbols: | Ribosomal protein L1p/L10e family | chr3:23444269-23446020 FORWARD LENGTH=346)

HSP 1 Score: 136.346 bits (342), Expect = 3.591e-33
Identity = 59/79 (74.68%), Postives = 74/79 (93.67%), Query Frame = 1
Query:   16 EFKQGKVEYRADKTGIVHLPFGKADFPEEDLLTNLLSAIKSVDSNKPSGAKGVYWKSAHICSAMGPSVRLNIKEMLDYR 252
            EFK+GKVE+RADKTGIVH+PFGK +F EEDLL N L+A+KSV++NKP GAKGVYWKSAHICS+MGPS++LNI+EM+D++
Sbjct:  263 EFKKGKVEFRADKTGIVHIPFGKVNFTEEDLLINFLAAVKSVETNKPKGAKGVYWKSAHICSSMGPSIKLNIREMIDFK 341          
BLAST of FG534382 vs. TAIR peptide
Match: AT2G42710.1 (| Symbols: | Ribosomal protein L1p/L10e family | chr2:17782352-17784830 FORWARD LENGTH=415)

HSP 1 Score: 51.6026 bits (122), Expect = 1.163e-7
Identity = 27/78 (34.62%), Postives = 43/78 (55.13%), Query Frame = 1
Query:   22 KQGKVEYRADKTGIVHLPFGKADFPEEDLLTNLLSAIKSVDSNKPSGAKGV-----YWKSAHICSAMGPSVRLNIKEM 240
            K G  ++R DKT I+H+P GK  F EE L  N+ + + ++   KP+G K       Y  + H+CS MG    ++I+ +
Sbjct:  325 KAGHTKFRMDKTSILHVPLGKMSFSEEALRENVGAFMNALLLAKPAGLKKTSKYAGYVNAFHLCSTMGKGYPVSIQSL 402          
The following BLAST results are available for this feature:
BLAST of FG534382 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9GFB2_POPTR4.757e-3583.13Ribosomal protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PK56_9ROSI4.757e-3583.13Ribosomal protein OS=Populus trichocarpa x Populus... [more]
D7T382_VITVI1.384e-3481.93Whole genome shotgun sequence of line PN40024, sca... [more]
B9HNT2_POPTR4.027e-3480.72Ribosomal protein OS=Populus trichocarpa GN=POPTRD... [more]
A9PFW5_POPTR4.027e-3480.72Ribosomal protein OS=Populus trichocarpa PE=2 SV=1[more]
B9RVK2_RICCO5.259e-3480.72Ribosomal protein OS=Ricinus communis GN=RCOM_0963... [more]
A9P244_PICSI8.397e-3274.70Ribosomal protein OS=Picea sitchensis PE=2 SV=1[more]
B6TN03_MAIZE1.432e-3171.95Ribosomal protein OS=Zea mays PE=2 SV=1[more]
Q60E59_ORYSJ5.443e-3170.73Ribosomal protein OS=Oryza sativa subsp. japonica ... [more]
C5YXG6_SORBI5.443e-3170.73Ribosomal protein OS=Sorghum bicolor GN=Sb09g01917... [more]
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BLAST of FG534382 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RK1_ARATH4.516e-3274.6850S ribosomal protein L1, chloroplastic OS=Arabido... [more]
RK1_SPIOL3.823e-3175.9550S ribosomal protein L1, chloroplastic OS=Spinaci... [more]
RK1_RHDSA1.720e-2363.6450S ribosomal protein L1, chloroplastic OS=Rhodomo... [more]
RK1_GUITH1.456e-2258.0250S ribosomal protein L1, chloroplastic OS=Guillar... [more]
RK1_PORPU2.484e-2259.2150S ribosomal protein L1, chloroplastic OS=Porphyr... [more]
RL1_ANAVT4.237e-2255.5650S ribosomal protein L1 OS=Anabaena variabilis (s... [more]
RL1_ANASP4.237e-2255.5650S ribosomal protein L1 OS=Anabaena sp. (strain P... [more]
RL1_SYNJA7.227e-2256.2550S ribosomal protein L1 OS=Synechococcus sp. (str... [more]
RL1_MICAN1.233e-2155.5650S ribosomal protein L1 OS=Microcystis aeruginosa... [more]
RK1_PORYE1.610e-2157.8950S ribosomal protein L1, chloroplastic OS=Porphyr... [more]
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BLAST of FG534382 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G63490.13.591e-3374.68| Symbols: | Ribosomal protein L1p/L10e family | ... [more]
AT2G42710.11.163e-734.62| Symbols: | Ribosomal protein L1p/L10e family | ... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002143Ribosomal protein L1PFAMPF00687Ribosomal_L1coord: 6..72
score: 2.3
IPR002143Ribosomal protein L1SUPERFAMILY56808Ribosomal protein L1coord: 6..79
score: 8.4
IPR016094Ribosomal protein L1, 2-layer alpha/beta-sandwichGENE3D3.30.190.20no descriptioncoord: 12..78
score: 2.4
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 6..85
score: 1.8
NoneNo IPR availablePANTHERPTHR23105:SF550S RIBOSOMAL PROTEIN L1Pcoord: 6..85
score: 1.8

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG534382 ID=FG534382; Name=FG534382; organism=Pisum sativum; type=EST; length=343bp
TTGACACATCAGGCAGAATTCAAACAGGGAAAAGTTGAATACAGGGCAGA
TAAAACGGGAATCGTGCACTTGCCTTTTGGAAAAGCCGATTTTCCAGAAG
AGGATCTTCTTACTAACTTGCTCTCTGCTATAAAATCAGTAGACTCAAAC
AAACCTTCTGGCGCGAAAGGTGTGTACTGGAAAAGTGCACACATATGCTC
AGCAATGGGTCCTTCTGTTAGGTTAAATATCAAGGAGATGCTTGATTATA
GGCTTCAATCAGAATAAAGCACTTGAATATGCTTGTTTTGTTTCAGTCAG
CTTTCTGGGTCATATTTTGTCGAAGATGTTACAAGGTTCTGTC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular anatomical structure
GO:0005840ribosome
Vocabulary: INTERPRO
TermDefinition
IPR002143Ribosomal_uL1
IPR016094Ribosomal_L1_2-a/b-sand