FG534584

EST Overview
NameFG534584
Unique NameFG534584
TypeEST
OrganismPisum sativum (pea)
Sequence length444
Libraries
Library NameType
LIBEST_023215 MeriZ Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
[Close]
BLAST of FG534584 vs. TrEMBL
Match: B7FMX7_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.328e-8
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 3 
Query:    3 SVGVEAEDSNIELLLSEVKGKDFAELIASGRE 98
            SVGVEAEDSNIELLLSEVKGKDFAELIASGRE
Sbjct:   29 SVGVEAEDSNIELLLSEVKGKDFAELIASGRE 60
[Close]
BLAST of FG534584 vs. TAIR peptide
Match: AT2G27710.3 (| Symbols: | 60S acidic ribosomal protein family | chr2:11816929-11817670 FORWARD LENGTH=115)

HSP 1 Score: 54.6842 bits (130), Expect = 2.421e-8
Identity = 35/87 (40.23%), Postives = 37/87 (42.53%), Query Frame = 3 
Query:    3 SVGVEAEDSNIELLLSEVKGKDFAELIASGREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 263
            SVG E EDS IELLL EVKGKD AELIA+GRE                                             DDDMGFSLF+
Sbjct:   29 SVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE 115
[Close]
BLAST of FG534584 vs. TAIR peptide
Match: AT2G27710.2 (| Symbols: | 60S acidic ribosomal protein family | chr2:11816929-11817670 FORWARD LENGTH=115)

HSP 1 Score: 54.6842 bits (130), Expect = 2.421e-8
Identity = 35/87 (40.23%), Postives = 37/87 (42.53%), Query Frame = 3 
Query:    3 SVGVEAEDSNIELLLSEVKGKDFAELIASGREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 263
            SVG E EDS IELLL EVKGKD AELIA+GRE                                             DDDMGFSLF+
Sbjct:   29 SVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE 115
[Close]
BLAST of FG534584 vs. TAIR peptide
Match: AT2G27720.1 (| Symbols: | 60S acidic ribosomal protein family | chr2:11818696-11819370 FORWARD LENGTH=115)

HSP 1 Score: 54.6842 bits (130), Expect = 2.421e-8
Identity = 35/87 (40.23%), Postives = 37/87 (42.53%), Query Frame = 3 
Query:    3 SVGVEAEDSNIELLLSEVKGKDFAELIASGREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 263
            SVG E EDS IELLL EVKGKD AELIA+GRE                                             DDDMGFSLF+
Sbjct:   29 SVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGAPAAESKKEEKKEEKEESDDDMGFSLFE 115
[Close]
BLAST of FG534584 vs. TAIR peptide
Match: AT2G27710.1 (| Symbols: | 60S acidic ribosomal protein family | chr2:11816929-11817670 FORWARD LENGTH=115)

HSP 1 Score: 54.6842 bits (130), Expect = 2.421e-8
Identity = 35/87 (40.23%), Postives = 37/87 (42.53%), Query Frame = 3 
Query:    3 SVGVEAEDSNIELLLSEVKGKDFAELIASGREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 263
            SVG E EDS IELLL EVKGKD AELIA+GRE                                             DDDMGFSLF+
Sbjct:   29 SVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE 115
[Close]
BLAST of FG534584 vs. TAIR peptide
Match: AT2G27720.3 (| Symbols: | 60S acidic ribosomal protein family | chr2:11818696-11819370 FORWARD LENGTH=127)

HSP 1 Score: 53.1434 bits (126), Expect = 7.044e-8
Identity = 34/86 (39.53%), Postives = 36/86 (41.86%), Query Frame = 3 
Query:    6 VGVEAEDSNIELLLSEVKGKDFAELIASGREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 263
            VG E EDS IELLL EVKGKD AELIA+GRE                                             DDDMGFSLF+
Sbjct:   42 VGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGAPAAESKKEEKKEEKEESDDDMGFSLFE 127
[Close]
BLAST of FG534584 vs. TAIR peptide
Match: AT2G27710.4 (| Symbols: | 60S acidic ribosomal protein family | chr2:11816929-11817670 FORWARD LENGTH=98)

HSP 1 Score: 52.373 bits (124), Expect = 1.202e-7
Identity = 26/32 (81.25%), Postives = 27/32 (84.38%), Query Frame = 3 
Query:    3 SVGVEAEDSNIELLLSEVKGKDFAELIASGRE 98
            SVG E EDS IELLL EVKGKD AELIA+GRE
Sbjct:   29 SVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60
The following BLAST results are available for this feature:
BLAST of FG534584 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
B7FMX7_MEDTR1.328e-8100.00Putative uncharacterized protein OS=Medicago trunc... [more]
back to top
BLAST of FG534584 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 6
Match NameE-valueIdentityDescription
AT2G27710.32.421e-840.23| Symbols: | 60S acidic ribosomal protein family ... [more]
AT2G27710.22.421e-840.23| Symbols: | 60S acidic ribosomal protein family ... [more]
AT2G27720.12.421e-840.23| Symbols: | 60S acidic ribosomal protein family ... [more]
AT2G27710.12.421e-840.23| Symbols: | 60S acidic ribosomal protein family ... [more]
AT2G27720.37.044e-839.53| Symbols: | 60S acidic ribosomal protein family ... [more]
AT2G27710.41.202e-781.25| Symbols: | 60S acidic ribosomal protein family ... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 21..56
score
NoneNo IPR availablePANTHERPTHR2114160S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBERcoord: 1..85
score: 1.3
NoneNo IPR availablePANTHERPTHR21141:SF560S ACIDIC RIBOSOMAL PROTEIN P2coord: 1..85
score: 1.3
NoneNo IPR availableSEGsegsegcoord: 33..77
score
NoneNo IPR availableSEGsegsegcoord: 8..53
score
IPR001813Ribosomal protein 60SPFAMPF00428Ribosomal_60scoord: 1..86
score: 1

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG534584 ID=FG534584; Name=FG534584; organism=Pisum sativum; type=EST; length=444bp
GATCAGTTGGAGTTGAGGCTGAGGACTCAAATATTGAGTTGCTCCTAAGT
GAAGTGAAAGGCAAAGATTTTGCTGAGCTTATTGCCAGTGGAAGAGAAAA
GTTGGCTTCAGTTCCATCTGGTGGCGGTGGTGGTGCCGTTGCTCTTTCTG
CTGCTTCTGGAGGAGGTGCTGCAGCTGCTGCCCCTGCTGCTGAAGCTAAG
GAGGAGAAGAAGGTGGAAGAGAAGGAAGAATCCGATGATGACATGGGATT
CAGCTTATTTGACTAAGGTCTGAAGTGAGTTACTTGTTAGACATTTGTGG
TTCTAGCTATAGTTTTAGTTTTACTCACAAGATTTTGCTATTTCAATTGA
GACAATGTAATGACATCGAATTTTAGGTGTTTTGAATTTATGTGTTACCC
TTTTTGGGTTCTTTTATTTATATGAATGAGTAAAAGACTAANNN
back to top
Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular anatomical structure
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Vocabulary: INTERPRO
TermDefinition
IPR001813Ribosomal protein 60S