GH719890

EST Overview


Name	GH719890
Unique Name	GH719890
Type	EST
Organism	Pisum sativum (pea)
Sequence length	590

Libraries


Library Name	Type
LIBEST_024269 TNI	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
KEGG analysis for Pisum sativum unigene v1	2011-01-05
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of GH719890 vs. TrEMBL
Match: C6T193_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.852e-62
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR
Sbjct:   71 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 137

HSP 2 Score: 85.5001 bits (210), Expect = 1.852e-62
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 2

Query:  305 IGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKN 427
            +GRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKN
Sbjct:  138 VGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKN 178

HSP 3 Score: 66.6254 bits (161), Expect = 1.852e-62
Identity = 32/33 (96.97%), Postives = 32/33 (96.97%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR KRELWRVQYALSRIRNNARNLLTLDEKNPR
Sbjct:   38 LRCKRELWRVQYALSRIRNNARNLLTLDEKNPR 70

[Close]

BLAST of GH719890 vs. TrEMBL
Match: C6SW41_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.858e-62
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR
Sbjct:   71 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 137

HSP 2 Score: 85.5001 bits (210), Expect = 1.858e-62
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 2

Query:  305 IGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKN 427
            +GRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKN
Sbjct:  138 VGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKN 178

HSP 3 Score: 66.6254 bits (161), Expect = 1.858e-62
Identity = 32/33 (96.97%), Postives = 32/33 (96.97%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR KRELWRVQYALSRIRNNARNLLTLDEKNPR
Sbjct:   38 LRCKRELWRVQYALSRIRNNARNLLTLDEKNPR 70

[Close]

BLAST of GH719890 vs. TrEMBL
Match: C6TFG0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.998e-61
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLI+QRHIR
Sbjct:   71 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIKQRHIR 137

HSP 2 Score: 83.1889 bits (204), Expect = 1.998e-61
Identity = 38/41 (92.68%), Postives = 41/41 (100.00%), Query Frame = 2

Query:  305 IGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKN 427
            +GRQVVNIPSF+VRVDSQKHIDFSLTSPLGGGRPGRVKR+N
Sbjct:  138 VGRQVVNIPSFLVRVDSQKHIDFSLTSPLGGGRPGRVKRRN 178

HSP 3 Score: 66.6254 bits (161), Expect = 1.998e-61
Identity = 32/33 (96.97%), Postives = 32/33 (96.97%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR KRELWRVQYALSRIRNNARNLLTLDEKNPR
Sbjct:   38 LRCKRELWRVQYALSRIRNNARNLLTLDEKNPR 70

[Close]

BLAST of GH719890 vs. TrEMBL
Match: B7FMD4_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 4.737e-60
Identity = 65/67 (97.01%), Postives = 67/67 (100.00%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            RIFEGEALLRRMF++GLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR
Sbjct:   71 RIFEGEALLRRMFKHGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 137

HSP 2 Score: 82.8037 bits (203), Expect = 4.737e-60
Identity = 39/42 (92.86%), Postives = 40/42 (95.24%), Query Frame = 2

Query:  305 IGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNL 430
            +GRQVVNIPSFMVRVDSQKHIDFSLTSP GGG PGRVKRKNL
Sbjct:  138 VGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGLPGRVKRKNL 179

HSP 3 Score: 64.3142 bits (155), Expect = 4.737e-60
Identity = 31/33 (93.94%), Postives = 31/33 (93.94%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR KRELWRVQYALSRIRNNAR LLTLDEKNPR
Sbjct:   38 LRCKRELWRVQYALSRIRNNARTLLTLDEKNPR 70

[Close]

BLAST of GH719890 vs. TrEMBL
Match: B8LND2_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.306e-59
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            RIFEGEALLRRM RYGLLDETQ+KLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR
Sbjct:   71 RIFEGEALLRRMNRYGLLDETQSKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 137

HSP 2 Score: 87.0409 bits (214), Expect = 2.306e-59
Identity = 41/42 (97.62%), Postives = 42/42 (100.00%), Query Frame = 2

Query:  305 IGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNL 430
            +GRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNL
Sbjct:  138 VGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNL 179

HSP 3 Score: 60.077 bits (144), Expect = 2.306e-59
Identity = 29/33 (87.88%), Postives = 29/33 (87.88%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR KRELWRVQY LSRIRN AR LLTLDEKNPR
Sbjct:   38 LRNKRELWRVQYTLSRIRNAARMLLTLDEKNPR 70

[Close]

BLAST of GH719890 vs. TrEMBL
Match: D7FBA7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00008028001 PE=4 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.622e-59
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            RIFEGEALLRRM RYGLLDE+QNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR
Sbjct:   71 RIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 137

HSP 2 Score: 83.1889 bits (204), Expect = 6.622e-59
Identity = 38/41 (92.68%), Postives = 41/41 (100.00%), Query Frame = 2

Query:  305 IGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKN 427
            +GRQVVNIPSF+VR+DSQKHIDFSLTSPLGGGRPGRVKRKN
Sbjct:  138 VGRQVVNIPSFLVRMDSQKHIDFSLTSPLGGGRPGRVKRKN 178

HSP 3 Score: 62.003 bits (149), Expect = 6.622e-59
Identity = 30/33 (90.91%), Postives = 30/33 (90.91%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR KRELWRVQY LSRIRNNAR LLTLDEKNPR
Sbjct:   38 LRCKRELWRVQYVLSRIRNNARMLLTLDEKNPR 70

[Close]

BLAST of GH719890 vs. TrEMBL
Match: A9NMP0_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.122e-58
Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            RIFEGEALLRRM RYGLLDE+Q+KLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR
Sbjct:   71 RIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 137

HSP 2 Score: 86.2705 bits (212), Expect = 1.122e-58
Identity = 40/42 (95.24%), Postives = 42/42 (100.00%), Query Frame = 2

Query:  305 IGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNL 430
            +GRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKN+
Sbjct:  138 VGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNM 179

HSP 3 Score: 60.077 bits (144), Expect = 1.122e-58
Identity = 29/33 (87.88%), Postives = 29/33 (87.88%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR KRELWRVQY LSRIRN AR LLTLDEKNPR
Sbjct:   38 LRNKRELWRVQYTLSRIRNAARMLLTLDEKNPR 70

[Close]

BLAST of GH719890 vs. TrEMBL
Match: B9RUP5_RICCO (40S ribosomal protein S9, putative OS=Ricinus communis GN=RCOM_0855200 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.122e-58
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            RIFEGEALLRRM RYGLLDE+QNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR
Sbjct:   71 RIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 137

HSP 2 Score: 83.9593 bits (206), Expect = 1.122e-58
Identity = 39/41 (95.12%), Postives = 40/41 (97.56%), Query Frame = 2

Query:  305 IGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKN 427
            +GRQVVNIPSFMVRVDSQKHIDFSLTSP GGGRPGRVKRKN
Sbjct:  138 VGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKN 178

HSP 3 Score: 60.4622 bits (145), Expect = 1.122e-58
Identity = 30/33 (90.91%), Postives = 30/33 (90.91%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR KRELWRVQYALSRIRN AR LLTLDEKNPR
Sbjct:   38 LRCKRELWRVQYALSRIRNAARMLLTLDEKNPR 70

[Close]

BLAST of GH719890 vs. TrEMBL
Match: D7TNB0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_26.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00020020001 PE=4 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 4.195e-58
Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            RIFEGEALLRRM +YGLLDE+QNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR
Sbjct:   71 RIFEGEALLRRMNKYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 137

HSP 2 Score: 81.6481 bits (200), Expect = 4.195e-58
Identity = 38/42 (90.48%), Postives = 41/42 (97.62%), Query Frame = 2

Query:  305 IGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNL 430
            +GRQVVNIPSFMVRV+SQKHIDF+ TSPLGGGRPGRVKRKNL
Sbjct:  138 VGRQVVNIPSFMVRVESQKHIDFANTSPLGGGRPGRVKRKNL 179

HSP 3 Score: 62.003 bits (149), Expect = 4.195e-58
Identity = 30/33 (90.91%), Postives = 30/33 (90.91%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR KRELWRVQY LSRIRNNAR LLTLDEKNPR
Sbjct:   38 LRCKRELWRVQYVLSRIRNNARMLLTLDEKNPR 70

[Close]

BLAST of GH719890 vs. TrEMBL
Match: Q6H8J2_CATRO (40S ribosomal protein S9 OS=Catharanthus roseus GN=rps9 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.252e-58
Identity = 65/67 (97.01%), Postives = 65/67 (97.01%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            RIFEGEALLRRM RYGLLDE QNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR
Sbjct:   71 RIFEGEALLRRMNRYGLLDEGQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 137

HSP 2 Score: 82.4185 bits (202), Expect = 9.252e-58
Identity = 36/42 (85.71%), Postives = 41/42 (97.62%), Query Frame = 2

Query:  305 IGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNL 430
            +G+QVVN+PSFMVRVDSQKHIDFS+TSP GGGRPGRVKRKN+
Sbjct:  138 VGKQVVNVPSFMVRVDSQKHIDFSITSPFGGGRPGRVKRKNM 179

HSP 3 Score: 60.077 bits (144), Expect = 9.252e-58
Identity = 29/33 (87.88%), Postives = 30/33 (90.91%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR KRELWRVQY LSRIRN ARNLLTLDEK+PR
Sbjct:   38 LRCKRELWRVQYVLSRIRNAARNLLTLDEKDPR 70

[Close]

BLAST of GH719890 vs. SwissProt
Match: RS92_ARATH (40S ribosomal protein S9-2 OS=Arabidopsis thaliana GN=RPS9C PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.469e-58
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            RIFEGEALLRRM RYGLLDETQNKLDYVLALTVENFLERRLQT+VFKSGMAKSIHHARVLIRQRHIR
Sbjct:   71 RIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGMAKSIHHARVLIRQRHIR 137

HSP 2 Score: 79.7221 bits (195), Expect = 1.469e-58
Identity = 35/41 (85.37%), Postives = 40/41 (97.56%), Query Frame = 2

Query:  305 IGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKN 427
            +GRQ+VNIPSFMVRV+SQKH+DFSLTSP GGGRPGRVKR+N
Sbjct:  138 VGRQLVNIPSFMVRVESQKHVDFSLTSPFGGGRPGRVKRRN 178

HSP 3 Score: 59.6918 bits (143), Expect = 1.469e-58
Identity = 29/33 (87.88%), Postives = 29/33 (87.88%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR KRELWRVQY LSRIRN AR LLTLDEKNPR
Sbjct:   38 LRCKRELWRVQYTLSRIRNAARELLTLDEKNPR 70

[Close]

BLAST of GH719890 vs. SwissProt
Match: RS91_ARATH (40S ribosomal protein S9-1 OS=Arabidopsis thaliana GN=RPS9B PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.668e-57
Identity = 63/67 (94.03%), Postives = 66/67 (98.51%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            RIFEGEALLRRM RYGLLDE+QNKLDYVLALTVENFLERRLQT+VFKSGMAKSIHH+RVLIRQRHIR
Sbjct:   71 RIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGMAKSIHHSRVLIRQRHIR 137

HSP 2 Score: 78.1814 bits (191), Expect = 2.668e-57
Identity = 34/41 (82.93%), Postives = 40/41 (97.56%), Query Frame = 2

Query:  305 IGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKN 427
            +G+Q+VNIPSFMVR+DSQKHIDF+LTSP GGGRPGRVKR+N
Sbjct:  138 VGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRN 178

HSP 3 Score: 59.6918 bits (143), Expect = 2.668e-57
Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR KRELWRVQY+LSRIRN AR+LLTLDEK+PR
Sbjct:   38 LRNKRELWRVQYSLSRIRNAARDLLTLDEKSPR 70

[Close]

BLAST of GH719890 vs. SwissProt
Match: RS9_DROME (40S ribosomal protein S9 OS=Drosophila melanogaster GN=RpS9 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.150e-46
Identity = 50/67 (74.63%), Postives = 59/67 (88.06%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            R+F+G ALLRR+ R G+LDE++ KLDYVL L +E+FLERRLQT VFK G+AKSIHHARVLIRQRHIR
Sbjct:   71 RLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIR 137

HSP 2 Score: 76.2554 bits (186), Expect = 1.150e-46
Identity = 35/42 (83.33%), Postives = 39/42 (92.86%), Query Frame = 2

Query:  305 IGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNL 430
            + +QVVNIPSF+VR+DSQKHIDFSL SP GGGRPGRVKRKNL
Sbjct:  138 VRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNL 179

HSP 3 Score: 48.9062 bits (115), Expect = 1.150e-46
Identity = 22/33 (66.67%), Postives = 28/33 (84.85%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR KRE+WRV+YAL++IR  AR LLTLDEK+ +
Sbjct:   38 LRNKREVWRVKYALAKIRKAARELLTLDEKDEK 70

[Close]

BLAST of GH719890 vs. SwissProt
Match: RS9_RAT (40S ribosomal protein S9 OS=Rattus norvegicus GN=Rps9 PE=1 SV=4)

HSP 1 Score: 102.834 bits (255), Expect = 2.531e-46
Identity = 50/67 (74.63%), Postives = 58/67 (86.57%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            R+FEG ALLRR+ R G+LDE + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLIRQRHIR
Sbjct:   70 RLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIR 136

HSP 2 Score: 74.3294 bits (181), Expect = 2.531e-46
Identity = 34/41 (82.93%), Postives = 38/41 (92.68%), Query Frame = 2

Query:  305 IGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKN 427
            + +QVVNIPSF+VR+DSQKHIDFSL SP GGGRPGRVKRKN
Sbjct:  137 VRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177

HSP 3 Score: 50.0618 bits (118), Expect = 2.531e-46
Identity = 22/33 (66.67%), Postives = 28/33 (84.85%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR KRE+WRV++ L++IR  AR LLTLDEK+PR
Sbjct:   37 LRNKREVWRVKFTLAKIRKAARELLTLDEKDPR 69

[Close]

BLAST of GH719890 vs. SwissProt
Match: RS9_PAPAN (40S ribosomal protein S9 OS=Papio anubis GN=RPS9 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.531e-46
Identity = 50/67 (74.63%), Postives = 58/67 (86.57%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            R+FEG ALLRR+ R G+LDE + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLIRQRHIR
Sbjct:   70 RLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIR 136

HSP 2 Score: 74.3294 bits (181), Expect = 2.531e-46
Identity = 34/41 (82.93%), Postives = 38/41 (92.68%), Query Frame = 2

Query:  305 IGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKN 427
            + +QVVNIPSF+VR+DSQKHIDFSL SP GGGRPGRVKRKN
Sbjct:  137 VRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177

HSP 3 Score: 50.0618 bits (118), Expect = 2.531e-46
Identity = 22/33 (66.67%), Postives = 28/33 (84.85%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR KRE+WRV++ L++IR  AR LLTLDEK+PR
Sbjct:   37 LRNKREVWRVKFTLAKIRKAARELLTLDEKDPR 69

[Close]

BLAST of GH719890 vs. SwissProt
Match: RS9_MOUSE (40S ribosomal protein S9 OS=Mus musculus GN=Rps9 PE=2 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 2.531e-46
Identity = 50/67 (74.63%), Postives = 58/67 (86.57%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            R+FEG ALLRR+ R G+LDE + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLIRQRHIR
Sbjct:   70 RLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIR 136

HSP 2 Score: 74.3294 bits (181), Expect = 2.531e-46
Identity = 34/41 (82.93%), Postives = 38/41 (92.68%), Query Frame = 2

Query:  305 IGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKN 427
            + +QVVNIPSF+VR+DSQKHIDFSL SP GGGRPGRVKRKN
Sbjct:  137 VRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177

HSP 3 Score: 50.0618 bits (118), Expect = 2.531e-46
Identity = 22/33 (66.67%), Postives = 28/33 (84.85%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR KRE+WRV++ L++IR  AR LLTLDEK+PR
Sbjct:   37 LRNKREVWRVKFTLAKIRKAARELLTLDEKDPR 69

[Close]

BLAST of GH719890 vs. SwissProt
Match: RS9_HUMAN (40S ribosomal protein S9 OS=Homo sapiens GN=RPS9 PE=1 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 2.531e-46
Identity = 50/67 (74.63%), Postives = 58/67 (86.57%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            R+FEG ALLRR+ R G+LDE + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLIRQRHIR
Sbjct:   70 RLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIR 136

HSP 2 Score: 74.3294 bits (181), Expect = 2.531e-46
Identity = 34/41 (82.93%), Postives = 38/41 (92.68%), Query Frame = 2

Query:  305 IGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKN 427
            + +QVVNIPSF+VR+DSQKHIDFSL SP GGGRPGRVKRKN
Sbjct:  137 VRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177

HSP 3 Score: 50.0618 bits (118), Expect = 2.531e-46
Identity = 22/33 (66.67%), Postives = 28/33 (84.85%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR KRE+WRV++ L++IR  AR LLTLDEK+PR
Sbjct:   37 LRNKREVWRVKFTLAKIRKAARELLTLDEKDPR 69

[Close]

BLAST of GH719890 vs. SwissProt
Match: RS9_BOVIN (40S ribosomal protein S9 OS=Bos taurus GN=RPS9 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.531e-46
Identity = 50/67 (74.63%), Postives = 58/67 (86.57%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            R+FEG ALLRR+ R G+LDE + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLIRQRHIR
Sbjct:   70 RLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIR 136

HSP 2 Score: 74.3294 bits (181), Expect = 2.531e-46
Identity = 34/41 (82.93%), Postives = 38/41 (92.68%), Query Frame = 2

Query:  305 IGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKN 427
            + +QVVNIPSF+VR+DSQKHIDFSL SP GGGRPGRVKRKN
Sbjct:  137 VRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKN 177

HSP 3 Score: 50.0618 bits (118), Expect = 2.531e-46
Identity = 22/33 (66.67%), Postives = 28/33 (84.85%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR KRE+WRV++ L++IR  AR LLTLDEK+PR
Sbjct:   37 LRNKREVWRVKFTLAKIRKAARELLTLDEKDPR 69

[Close]

BLAST of GH719890 vs. SwissProt
Match: RS9_PODAN (40S ribosomal protein S9 OS=Podospora anserina GN=RPS9 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.533e-46
Identity = 51/67 (76.12%), Postives = 60/67 (89.55%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            R+FEG AL+RR+ R G+LDE++ KLDYVLAL  E+FLERRLQTLV+K G+AKSIHHARVLIRQRHIR
Sbjct:   67 RLFEGNALIRRLVRVGVLDESRMKLDYVLALKAEDFLERRLQTLVYKLGLAKSIHHARVLIRQRHIR 133

HSP 2 Score: 74.7146 bits (182), Expect = 2.533e-46
Identity = 31/40 (77.50%), Postives = 39/40 (97.50%), Query Frame = 2

Query:  305 IGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRK 424
            +G+Q+VN+PSF+VR+DSQKHIDF+LTSP GGGRPGRV+RK
Sbjct:  134 VGKQIVNVPSFVVRLDSQKHIDFALTSPFGGGRPGRVRRK 173

HSP 3 Score: 47.3654 bits (111), Expect = 2.533e-46
Identity = 22/33 (66.67%), Postives = 26/33 (78.79%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR KRE+WRV   LS+IR  AR LLTLDEK+P+
Sbjct:   34 LRNKREVWRVLLTLSKIRRAARELLTLDEKDPK 66

[Close]

BLAST of GH719890 vs. SwissProt
Match: RS9A_SCHPO (40S ribosomal protein S9-A OS=Schizosaccharomyces pombe GN=rps9a PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.004e-44
Identity = 50/67 (74.63%), Postives = 59/67 (88.06%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            R+FEG A++RR+ R G+LDET+ KLDYVLAL +E+FLERRLQT VFK G+AKSIHHARVLI QRHIR
Sbjct:   69 RLFEGNAIIRRLVRLGILDETRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHARVLIFQRHIR 135

HSP 2 Score: 72.4034 bits (176), Expect = 1.004e-44
Identity = 30/42 (71.43%), Postives = 39/42 (92.86%), Query Frame = 2

Query:  305 IGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKNL 430
            +G+Q+VN+PSF+VR+D+QKHIDF+L+SP GGGRPGR KRK L
Sbjct:  136 VGKQIVNVPSFVVRLDTQKHIDFALSSPYGGGRPGRCKRKRL 177

HSP 3 Score: 46.2098 bits (108), Expect = 1.004e-44
Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR K E+WRV   LS+IR  AR LLTLDEK+P+
Sbjct:   36 LRNKHEIWRVALTLSKIRRAARELLTLDEKDPK 68

[Close]

BLAST of GH719890 vs. TAIR peptide
Match: AT5G39850.1 (| Symbols: | Ribosomal protein S4 | chr5:15950053-15951171 FORWARD LENGTH=197)

HSP 1 Score: 129.028 bits (323), Expect = 1.538e-59
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            RIFEGEALLRRM RYGLLDETQNKLDYVLALTVENFLERRLQT+VFKSGMAKSIHHARVLIRQRHIR
Sbjct:   71 RIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGMAKSIHHARVLIRQRHIR 137

HSP 2 Score: 79.7221 bits (195), Expect = 1.538e-59
Identity = 35/41 (85.37%), Postives = 40/41 (97.56%), Query Frame = 2

Query:  305 IGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKN 427
            +GRQ+VNIPSFMVRV+SQKH+DFSLTSP GGGRPGRVKR+N
Sbjct:  138 VGRQLVNIPSFMVRVESQKHVDFSLTSPFGGGRPGRVKRRN 178

HSP 3 Score: 59.6918 bits (143), Expect = 1.538e-59
Identity = 29/33 (87.88%), Postives = 29/33 (87.88%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR KRELWRVQY LSRIRN AR LLTLDEKNPR
Sbjct:   38 LRCKRELWRVQYTLSRIRNAARELLTLDEKNPR 70

[Close]

BLAST of GH719890 vs. TAIR peptide
Match: AT5G15200.1 (| Symbols: | Ribosomal protein S4 | chr5:4935124-4936334 REVERSE LENGTH=198)

HSP 1 Score: 126.331 bits (316), Expect = 2.795e-58
Identity = 63/67 (94.03%), Postives = 66/67 (98.51%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            RIFEGEALLRRM RYGLLDE+QNKLDYVLALTVENFLERRLQT+VFKSGMAKSIHH+RVLIRQRHIR
Sbjct:   71 RIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGMAKSIHHSRVLIRQRHIR 137

HSP 2 Score: 78.1814 bits (191), Expect = 2.795e-58
Identity = 34/41 (82.93%), Postives = 40/41 (97.56%), Query Frame = 2

Query:  305 IGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVKRKN 427
            +G+Q+VNIPSFMVR+DSQKHIDF+LTSP GGGRPGRVKR+N
Sbjct:  138 VGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRN 178

HSP 3 Score: 59.6918 bits (143), Expect = 2.795e-58
Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR KRELWRVQY+LSRIRN AR+LLTLDEK+PR
Sbjct:   38 LRNKRELWRVQYSLSRIRNAARDLLTLDEKSPR 70

[Close]

BLAST of GH719890 vs. TAIR peptide
Match: AT5G15200.2 (| Symbols: | Ribosomal protein S4 | chr5:4935602-4936334 REVERSE LENGTH=156)

HSP 1 Score: 126.331 bits (316), Expect = 3.497e-41
Identity = 63/67 (94.03%), Postives = 66/67 (98.51%), Query Frame = 1

Query:  103 RIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIR 303
            RIFEGEALLRRM RYGLLDE+QNKLDYVLALTVENFLERRLQT+VFKSGMAKSIHH+RVLIRQRHIR
Sbjct:   71 RIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGMAKSIHHSRVLIRQRHIR 137

HSP 2 Score: 59.6918 bits (143), Expect = 3.497e-41
Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 3

Query:    3 LRRKRELWRVQYALSRIRNNARNLLTLDEKNPR 101
            LR KRELWRVQY+LSRIRN AR+LLTLDEK+PR
Sbjct:   38 LRNKRELWRVQYSLSRIRNAARDLLTLDEKSPR 70

The following BLAST results are available for this feature:

BLAST of GH719890 vs. TrEMBL
BLAST of GH719890 vs. SwissProt
BLAST of GH719890 vs. TAIR peptide

BLAST of GH719890 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6T193_SOYBN	1.852e-62	100.00	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SW41_SOYBN	1.858e-62	100.00	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TFG0_SOYBN	1.998e-61	98.51	Putative uncharacterized protein OS=Glycine max PE...	[more]
B7FMD4_MEDTR	4.737e-60	97.01	Putative uncharacterized protein OS=Medicago trunc...	[more]
B8LND2_PICSI	2.306e-59	97.01	Putative uncharacterized protein OS=Picea sitchens...	[more]
D7FBA7_VITVI	6.622e-59	97.01	Whole genome shotgun sequence of line PN40024, sca...	[more]
A9NMP0_PICSI	1.122e-58	95.52	Putative uncharacterized protein OS=Picea sitchens...	[more]
B9RUP5_RICCO	1.122e-58	97.01	40S ribosomal protein S9, putative OS=Ricinus comm...	[more]
D7TNB0_VITVI	4.195e-58	95.52	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q6H8J2_CATRO	9.252e-58	97.01	40S ribosomal protein S9 OS=Catharanthus roseus GN...	[more]

BLAST of GH719890 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RS92_ARATH	1.469e-58	97.01	40S ribosomal protein S9-2 OS=Arabidopsis thaliana...	[more]
RS91_ARATH	2.668e-57	94.03	40S ribosomal protein S9-1 OS=Arabidopsis thaliana...	[more]
RS9_DROME	1.150e-46	74.63	40S ribosomal protein S9 OS=Drosophila melanogaste...	[more]
RS9_RAT	2.531e-46	74.63	40S ribosomal protein S9 OS=Rattus norvegicus GN=R...	[more]
RS9_PAPAN	2.531e-46	74.63	40S ribosomal protein S9 OS=Papio anubis GN=RPS9 P...	[more]
RS9_MOUSE	2.531e-46	74.63	40S ribosomal protein S9 OS=Mus musculus GN=Rps9 P...	[more]
RS9_HUMAN	2.531e-46	74.63	40S ribosomal protein S9 OS=Homo sapiens GN=RPS9 P...	[more]
RS9_BOVIN	2.531e-46	74.63	40S ribosomal protein S9 OS=Bos taurus GN=RPS9 PE=...	[more]
RS9_PODAN	2.533e-46	76.12	40S ribosomal protein S9 OS=Podospora anserina GN=...	[more]
RS9A_SCHPO	1.004e-44	74.63	40S ribosomal protein S9-A OS=Schizosaccharomyces ...	[more]

BLAST of GH719890 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT5G39850.1	1.538e-59	97.01	\| Symbols: \| Ribosomal protein S4 \| chr5:15950053...	[more]
AT5G15200.1	2.795e-58	94.03	\| Symbols: \| Ribosomal protein S4 \| chr5:4935124-...	[more]
AT5G15200.2	3.497e-41	94.03	\| Symbols: \| Ribosomal protein S4 \| chr5:4935602-...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001912	Ribosomal protein S4/S9, N-terminal	PFAM	PF00163	Ribosomal_S4	coord: 9..46 score: 3.1
IPR002942	RNA-binding S4	PFAM	PF01479	S4	coord: 47..75 score: 1.6
IPR018079	Ribosomal protein S4, conserved site	PROSITE	PS00632	RIBOSOMAL_S4	coord: 45..69 score
IPR022801	Ribosomal protein S4/S9	PANTHER	PTHR11831	30S 40S RIBOSOMAL PROTEIN	coord: 9..75 score: 1.4
IPR022801	Ribosomal protein S4/S9	PANTHER	PTHR11831	30S 40S RIBOSOMAL PROTEIN	coord: 59..116 score: 6.6
None	No IPR available	GENE3D	3.10.290.10	no description	coord: 49..74 score: 0.0
None	No IPR available	PANTHER	PTHR11831:SF3	40S RIBOSOMAL PROTEIN S9	coord: 9..75 score: 1.4
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 9..75 score: 1.7
None	No IPR available	PANTHER	PTHR11831:SF3	40S RIBOSOMAL PROTEIN S9	coord: 59..116 score: 6.6
None	No IPR available	SEG	seg	seg	coord: 101..107 score: NAcoord: 109..118 score
None	No IPR available	SEG	seg	seg	coord: 1..10 score: NAcoord: 12..33 score
None	No IPR available	SEG	seg	seg	coord: 41..52 score

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GH719890 ID=GH719890; Name=GH719890; organism=Pisum sativum; type=EST; length=590bp
GGCTTCGCCGCAAAAGGGAGCTCTGGAGGGTTCAATACGCTCTCAGCCGT
ATCCGTAACAATGCGAGGAATCTGTTGACGCTGGATGAGAAGAATCCTCG
GTCGGATCTTTGAGGGTGAAGCACTTTTGAGGAGAATGTTTCGTTATGGT
CTTCTTGATGAAACTCAGAACAAGCTCGATTACGTCTTGGCTCTCACTGT
TGAGAACTTTCTCGAGCGTCGCCTTCAGACACTTGTTTTCAAATCTGGCA
TGGCTAAGTCCATTCATCACGCTAGGGTTCTTATCAGGCAAAGGCACATC
AGGGATTGGGAGACAGGTGGTGAACATTCCATCATTCATGGTGAGGGTTG
ATTCACAGAAGCACATTGACTTTTCACTCACAAGTCCTCTTGGTGGTGGT
CGTCCTGGTCGTGTGAAACGAAAGAACCTTAAGGCTGCAGCTAAGAAGGC
TTCAGGTGATGATGGAGATGAGGAGGATGAAGACTAAACAATTAATGTCT
GATGCTTTGATTCTAGCAACTACTTTATTTATGTTCTAGACTTTTTAGAT
TTTTAATCATGCATGAGTTTTACAATTTTGCTACCCTTGG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure

Vocabulary: **Molecular Function**
Term	Definition
GO:0019843	rRNA binding
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001912	Ribosomal_uS4_N
IPR002942	S4_RNA-bd
IPR018079	Ribosomal_S4_CS
IPR022801	Ribosomal_uS4

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