EX570049

EST Overview
NameEX570049
Unique NameEX570049
TypeEST
OrganismPisum sativum (pea)
Sequence length504
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of EX570049 vs. TrEMBL
Match: B9I9B3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_572529 PE=4 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.008e-20
Identity = 61/113 (53.98%), Postives = 77/113 (68.14%), Query Frame = 1
Query:    1 LRSFQAAIAVQSNTVIEIKEKAPVLAIQEEKPAAGKKNPASRPLSMIIKVKPQAKKAKVDEGNTEEVSKAGITSVNDKSKPLEPVQPLNGIADKSNEVGLTGLVSYSDESDDD 339
            LRSFQAA+A QS +V ++KE   V  + E+K + G+KNP +RPLSMIIKVKPQAKKAK+D GN EE  + G T   +  K  + V+        SN+V  TGLVSYSDES+DD
Sbjct:   99 LRSFQAAVAAQSFSVDDLKETPLVPPVPEQK-SIGRKNPPARPLSMIIKVKPQAKKAKMDLGNVEEHLEIGKTPDFNMEKSSDTVKV------PSNDVAKTGLVSYSDESEDD 204          
BLAST of EX570049 vs. TrEMBL
Match: B9RN44_RICCO (NEFA-interacting nuclear protein NIP30, putative OS=Ricinus communis GN=RCOM_1343450 PE=4 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.302e-19
Identity = 59/113 (52.21%), Postives = 73/113 (64.60%), Query Frame = 1
Query:    1 LRSFQAAIAVQSNTVIEIKEKAPVLAIQEEKPAAGKKNPASRPLSMIIKVKPQAKKAKVDEGNTEEVSKAGITSVNDKSKPLEPVQPLNGIADKSNEVGLTGLVSYSDESDDD 339
            LRSFQAA+A QS  + E+KE  PV  +QE K      +P SRPLSMIIKVKPQAKKAK+  GN E         V D  K  + V+  NG +++ ++V  TGLVSYSDES+DD
Sbjct:   99 LRSFQAAVAAQSTILHELKETPPVPVVQEHKHFF--LHPPSRPLSMIIKVKPQAKKAKIGHGNVEPSDYVKTPDV-DSEKSSDLVKIPNGCSNEFHDVAKTGLVSYSDESEDD 208          
BLAST of EX570049 vs. TrEMBL
Match: D7U2U5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00028253001 PE=4 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.787e-19
Identity = 56/113 (49.56%), Postives = 73/113 (64.60%), Query Frame = 1
Query:    1 LRSFQAAIAVQSNTVIEIKEKAPVLAIQEEKPAAGKKNPASRPLSMIIKVKPQAKKAKVDEGNTEEVSKAGITSVNDKSKPLEPVQPLNGIADKSNEVGLTGLVSYSDESDDD 339
            LRSFQAA+A QS  V E+K+  P   +QE+KP   +KNP S  L MIIKVKPQAKKAKVD  N+E        S+ D  KP +  +  +   D++++V   GLVSYSDES++D
Sbjct:   91 LRSFQAAVAAQSTIVHELKDTPPAPKVQEQKPVV-RKNPPSHRLGMIIKVKPQAKKAKVDPANSEGSEIVKTPSI-DTEKPSDLEKKYSVDTDEAHDVPANGLVSYSDESEED 201          
BLAST of EX570049 vs. TrEMBL
Match: D7LST7_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_907780 PE=4 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.660e-15
Identity = 55/123 (44.72%), Postives = 68/123 (55.28%), Query Frame = 1
Query:    1 LRSFQAAIAVQSNTVIEIKEKAPV--LAIQEEKPAAGKKNPASRPLSMIIKVKPQAKKAKVDEGNTEEVSKAGITSVNDKSKPLEPVQPLNGIADKSNEVGLT--------GLVSYSDESDDD 339
            LRSFQAA+A +S  + E KE AP     I +E+   GK+NPA+RP   IIKVKPQ KKAK  E   +E+   G        KP   + P +  + K N  G T        GLVSYSDES+DD
Sbjct:   99 LRSFQAAVAARSAILHEPKEAAPPPPAPITKEQKPTGKRNPATRPFKAIIKVKPQPKKAKATEKEEKEIPWNG--------KPASQIDPTSLDSAKGNVTGKTAEALQTGLGLVSYSDESEDD 213          
BLAST of EX570049 vs. TrEMBL
Match: Q9M1R0_ARATH (Putative uncharacterized protein T17J13.100 OS=Arabidopsis thaliana GN=T17J13.100 PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.821e-13
Identity = 53/118 (44.92%), Postives = 70/118 (59.32%), Query Frame = 1
Query:    1 LRSFQAAIAVQSNTVIEIKEKA---PVLAIQEEKPAAGKKNPASRPLSMIIKVKPQAKKAKVDEGNTEEVSKAGITSVNDKSKPLEPVQPLNGIADKSNEVGLTG--LVSYSDESDDD 339
            LR+FQAA+A +S  + E KE A   P    +E+KP  GK+NPA+RP   IIKVKPQ KKAK  E   +E+   G  + +     L+ V+    +  K+ E   TG  LVSYSDES+DD
Sbjct:  126 LRNFQAAVAARSAILHEPKEAALPPPAPVTKEQKPI-GKRNPATRPFKAIIKVKPQPKKAKATEKEEKEIPGNGKPASHIDQASLDSVK--GNVTGKTTEGLQTGLALVSYSDESEDD 240          
BLAST of EX570049 vs. TrEMBL
Match: Q5XV94_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At3g62140 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.821e-13
Identity = 53/118 (44.92%), Postives = 70/118 (59.32%), Query Frame = 1
Query:    1 LRSFQAAIAVQSNTVIEIKEKA---PVLAIQEEKPAAGKKNPASRPLSMIIKVKPQAKKAKVDEGNTEEVSKAGITSVNDKSKPLEPVQPLNGIADKSNEVGLTG--LVSYSDESDDD 339
            LR+FQAA+A +S  + E KE A   P    +E+KP  GK+NPA+RP   IIKVKPQ KKAK  E   +E+   G  + +     L+ V+    +  K+ E   TG  LVSYSDES+DD
Sbjct:   99 LRNFQAAVAARSAILHEPKEAALPPPAPVTKEQKPI-GKRNPATRPFKAIIKVKPQPKKAKATEKEEKEIPGNGKPASHIDQASLDSVK--GNVTGKTTEGLQTGLALVSYSDESEDD 213          
BLAST of EX570049 vs. TrEMBL
Match: Q5XV93_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.821e-13
Identity = 53/118 (44.92%), Postives = 70/118 (59.32%), Query Frame = 1
Query:    1 LRSFQAAIAVQSNTVIEIKEKA---PVLAIQEEKPAAGKKNPASRPLSMIIKVKPQAKKAKVDEGNTEEVSKAGITSVNDKSKPLEPVQPLNGIADKSNEVGLTG--LVSYSDESDDD 339
            LR+FQAA+A +S  + E KE A   P    +E+KP  GK+NPA+RP   IIKVKPQ KKAK  E   +E+   G  + +     L+ V+    +  K+ E   TG  LVSYSDES+DD
Sbjct:   18 LRNFQAAVAARSAILHEPKEAALPPPAPVTKEQKPI-GKRNPATRPFKAIIKVKPQPKKAKATEKEEKEIPGNGKPASHIDQASLDSVK--GNVTGKTTEGLQTGLALVSYSDESEDD 132          
BLAST of EX570049 vs. TAIR peptide
Match: AT3G62140.1 (| Symbols: | CONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (InterPro:IPR019331); Has 398 Blast hits to 395 proteins in 139 species: Archae - 0; Bacteria - 6; Metazoa - 193; Fungi - 83; Plants - 36; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). | chr3:23007277-23008626 FORWARD LENGTH=214)

HSP 1 Score: 78.9518 bits (193), Expect = 1.595e-15
Identity = 53/118 (44.92%), Postives = 70/118 (59.32%), Query Frame = 1
Query:    1 LRSFQAAIAVQSNTVIEIKEKA---PVLAIQEEKPAAGKKNPASRPLSMIIKVKPQAKKAKVDEGNTEEVSKAGITSVNDKSKPLEPVQPLNGIADKSNEVGLTG--LVSYSDESDDD 339
            LR+FQAA+A +S  + E KE A   P    +E+KP  GK+NPA+RP   IIKVKPQ KKAK  E   +E+   G  + +     L+ V+    +  K+ E   TG  LVSYSDES+DD
Sbjct:   99 LRNFQAAVAARSAILHEPKEAALPPPAPVTKEQKPI-GKRNPATRPFKAIIKVKPQPKKAKATEKEEKEIPGNGKPASHIDQASLDSVK--GNVTGKTTEGLQTGLALVSYSDESEDD 213          
The following BLAST results are available for this feature:
BLAST of EX570049 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 7
Match NameE-valueIdentityDescription
B9I9B3_POPTR2.008e-2053.98Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9RN44_RICCO1.302e-1952.21NEFA-interacting nuclear protein NIP30, putative O... [more]
D7U2U5_VITVI3.787e-1949.56Whole genome shotgun sequence of line PN40024, sca... [more]
D7LST7_ARALY5.660e-1544.72Putative uncharacterized protein OS=Arabidopsis ly... [more]
Q9M1R0_ARATH1.821e-1344.92Putative uncharacterized protein T17J13.100 OS=Ara... [more]
Q5XV94_ARATH1.821e-1344.92Putative uncharacterized protein OS=Arabidopsis th... [more]
Q5XV93_ARATH1.821e-1344.92Putative uncharacterized protein OS=Arabidopsis th... [more]
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BLAST of EX570049 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G62140.11.595e-1544.92| Symbols: | CONTAINS InterPro DOMAIN/s: NEFA-int... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 11..17
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX570049 ID=EX570049; Name=EX570049; organism=Pisum sativum; type=EST; length=504bp
TTACGTAGCTTTCAAGCGGCAATAGCAGTGCAGTCCAACACTGTGATTGA
AATTAAGGAAAAAGCCCCCGTGCTTGCAATCCAGGAAGAAAAGCCTGCTG
CTGGAAAGAAGAATCCAGCCTCTCGCCCATTAAGCATGATTATAAAAGTT
AAGCCTCAAGCTAAAAAAGCCAAGGTGGATGAAGGAAATACCGAAGAAGT
TTCAAAAGCAGGGATTACTTCTGTGAATGATAAGAGTAAGCCTTTAGAAC
CAGTACAACCATTGAATGGCATAGCTGATAAGTCAAACGAAGTTGGCCTA
ACTGGCCTTGTTTCGTATAGTGATGAAAGTGATGATGACTTGTAGTTTGA
TATCTGTATGATGAGAAGTTATATGATTCTGGCTACTCATATGCCTATTA
TAGTAAAACTAGATTTATAGTTGAAGGTTTATGATCCATGCATAAATATG
ATTTCCGACTAGGTTGAGAATGGCTGCATATAGATATACACTTCATTTGA
AAAG
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