EX570049
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EX570049 vs. TrEMBL
Match: B9I9B3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_572529 PE=4 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.008e-20 Identity = 61/113 (53.98%), Postives = 77/113 (68.14%), Query Frame = 1 Query: 1 LRSFQAAIAVQSNTVIEIKEKAPVLAIQEEKPAAGKKNPASRPLSMIIKVKPQAKKAKVDEGNTEEVSKAGITSVNDKSKPLEPVQPLNGIADKSNEVGLTGLVSYSDESDDD 339 LRSFQAA+A QS +V ++KE V + E+K + G+KNP +RPLSMIIKVKPQAKKAK+D GN EE + G T + K + V+ SN+V TGLVSYSDES+DD Sbjct: 99 LRSFQAAVAAQSFSVDDLKETPLVPPVPEQK-SIGRKNPPARPLSMIIKVKPQAKKAKMDLGNVEEHLEIGKTPDFNMEKSSDTVKV------PSNDVAKTGLVSYSDESEDD 204
BLAST of EX570049 vs. TrEMBL
Match: B9RN44_RICCO (NEFA-interacting nuclear protein NIP30, putative OS=Ricinus communis GN=RCOM_1343450 PE=4 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.302e-19 Identity = 59/113 (52.21%), Postives = 73/113 (64.60%), Query Frame = 1 Query: 1 LRSFQAAIAVQSNTVIEIKEKAPVLAIQEEKPAAGKKNPASRPLSMIIKVKPQAKKAKVDEGNTEEVSKAGITSVNDKSKPLEPVQPLNGIADKSNEVGLTGLVSYSDESDDD 339 LRSFQAA+A QS + E+KE PV +QE K +P SRPLSMIIKVKPQAKKAK+ GN E V D K + V+ NG +++ ++V TGLVSYSDES+DD Sbjct: 99 LRSFQAAVAAQSTILHELKETPPVPVVQEHKHFF--LHPPSRPLSMIIKVKPQAKKAKIGHGNVEPSDYVKTPDV-DSEKSSDLVKIPNGCSNEFHDVAKTGLVSYSDESEDD 208
BLAST of EX570049 vs. TrEMBL
Match: D7U2U5_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00028253001 PE=4 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.787e-19 Identity = 56/113 (49.56%), Postives = 73/113 (64.60%), Query Frame = 1 Query: 1 LRSFQAAIAVQSNTVIEIKEKAPVLAIQEEKPAAGKKNPASRPLSMIIKVKPQAKKAKVDEGNTEEVSKAGITSVNDKSKPLEPVQPLNGIADKSNEVGLTGLVSYSDESDDD 339 LRSFQAA+A QS V E+K+ P +QE+KP +KNP S L MIIKVKPQAKKAKVD N+E S+ D KP + + + D++++V GLVSYSDES++D Sbjct: 91 LRSFQAAVAAQSTIVHELKDTPPAPKVQEQKPVV-RKNPPSHRLGMIIKVKPQAKKAKVDPANSEGSEIVKTPSI-DTEKPSDLEKKYSVDTDEAHDVPANGLVSYSDESEED 201
BLAST of EX570049 vs. TrEMBL
Match: D7LST7_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_907780 PE=4 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.660e-15 Identity = 55/123 (44.72%), Postives = 68/123 (55.28%), Query Frame = 1 Query: 1 LRSFQAAIAVQSNTVIEIKEKAPV--LAIQEEKPAAGKKNPASRPLSMIIKVKPQAKKAKVDEGNTEEVSKAGITSVNDKSKPLEPVQPLNGIADKSNEVGLT--------GLVSYSDESDDD 339 LRSFQAA+A +S + E KE AP I +E+ GK+NPA+RP IIKVKPQ KKAK E +E+ G KP + P + + K N G T GLVSYSDES+DD Sbjct: 99 LRSFQAAVAARSAILHEPKEAAPPPPAPITKEQKPTGKRNPATRPFKAIIKVKPQPKKAKATEKEEKEIPWNG--------KPASQIDPTSLDSAKGNVTGKTAEALQTGLGLVSYSDESEDD 213
BLAST of EX570049 vs. TrEMBL
Match: Q9M1R0_ARATH (Putative uncharacterized protein T17J13.100 OS=Arabidopsis thaliana GN=T17J13.100 PE=4 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.821e-13 Identity = 53/118 (44.92%), Postives = 70/118 (59.32%), Query Frame = 1 Query: 1 LRSFQAAIAVQSNTVIEIKEKA---PVLAIQEEKPAAGKKNPASRPLSMIIKVKPQAKKAKVDEGNTEEVSKAGITSVNDKSKPLEPVQPLNGIADKSNEVGLTG--LVSYSDESDDD 339 LR+FQAA+A +S + E KE A P +E+KP GK+NPA+RP IIKVKPQ KKAK E +E+ G + + L+ V+ + K+ E TG LVSYSDES+DD Sbjct: 126 LRNFQAAVAARSAILHEPKEAALPPPAPVTKEQKPI-GKRNPATRPFKAIIKVKPQPKKAKATEKEEKEIPGNGKPASHIDQASLDSVK--GNVTGKTTEGLQTGLALVSYSDESEDD 240
BLAST of EX570049 vs. TrEMBL
Match: Q5XV94_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At3g62140 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.821e-13 Identity = 53/118 (44.92%), Postives = 70/118 (59.32%), Query Frame = 1 Query: 1 LRSFQAAIAVQSNTVIEIKEKA---PVLAIQEEKPAAGKKNPASRPLSMIIKVKPQAKKAKVDEGNTEEVSKAGITSVNDKSKPLEPVQPLNGIADKSNEVGLTG--LVSYSDESDDD 339 LR+FQAA+A +S + E KE A P +E+KP GK+NPA+RP IIKVKPQ KKAK E +E+ G + + L+ V+ + K+ E TG LVSYSDES+DD Sbjct: 99 LRNFQAAVAARSAILHEPKEAALPPPAPVTKEQKPI-GKRNPATRPFKAIIKVKPQPKKAKATEKEEKEIPGNGKPASHIDQASLDSVK--GNVTGKTTEGLQTGLALVSYSDESEDD 213
BLAST of EX570049 vs. TrEMBL
Match: Q5XV93_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.821e-13 Identity = 53/118 (44.92%), Postives = 70/118 (59.32%), Query Frame = 1 Query: 1 LRSFQAAIAVQSNTVIEIKEKA---PVLAIQEEKPAAGKKNPASRPLSMIIKVKPQAKKAKVDEGNTEEVSKAGITSVNDKSKPLEPVQPLNGIADKSNEVGLTG--LVSYSDESDDD 339 LR+FQAA+A +S + E KE A P +E+KP GK+NPA+RP IIKVKPQ KKAK E +E+ G + + L+ V+ + K+ E TG LVSYSDES+DD Sbjct: 18 LRNFQAAVAARSAILHEPKEAALPPPAPVTKEQKPI-GKRNPATRPFKAIIKVKPQPKKAKATEKEEKEIPGNGKPASHIDQASLDSVK--GNVTGKTTEGLQTGLALVSYSDESEDD 132
BLAST of EX570049 vs. TAIR peptide
Match: AT3G62140.1 (| Symbols: | CONTAINS InterPro DOMAIN/s: NEFA-interacting nuclear protein NIP30, N-terminal (InterPro:IPR019331); Has 398 Blast hits to 395 proteins in 139 species: Archae - 0; Bacteria - 6; Metazoa - 193; Fungi - 83; Plants - 36; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). | chr3:23007277-23008626 FORWARD LENGTH=214) HSP 1 Score: 78.9518 bits (193), Expect = 1.595e-15 Identity = 53/118 (44.92%), Postives = 70/118 (59.32%), Query Frame = 1 Query: 1 LRSFQAAIAVQSNTVIEIKEKA---PVLAIQEEKPAAGKKNPASRPLSMIIKVKPQAKKAKVDEGNTEEVSKAGITSVNDKSKPLEPVQPLNGIADKSNEVGLTG--LVSYSDESDDD 339 LR+FQAA+A +S + E KE A P +E+KP GK+NPA+RP IIKVKPQ KKAK E +E+ G + + L+ V+ + K+ E TG LVSYSDES+DD Sbjct: 99 LRNFQAAVAARSAILHEPKEAALPPPAPVTKEQKPI-GKRNPATRPFKAIIKVKPQPKKAKATEKEEKEIPGNGKPASHIDQASLDSVK--GNVTGKTTEGLQTGLALVSYSDESEDD 213 The following BLAST results are available for this feature:
BLAST of EX570049 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 7
BLAST of EX570049 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EX570049 ID=EX570049; Name=EX570049; organism=Pisum sativum; type=EST; length=504bpback to top |