CD858934
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CD858934 vs. TrEMBL
Match: C6SZV9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.187e-14 Identity = 38/44 (86.36%), Postives = 41/44 (93.18%), Query Frame = 3 Query: 36 VRAKDGSAFAKCDECKKNVPVALISMHDCSLEAKIKMNLDSHVV 167 VRAKDGSAFA+CD+CKKNVPVALI MH CSLEAKIKMNLD+ VV Sbjct: 22 VRAKDGSAFARCDDCKKNVPVALIDMHSCSLEAKIKMNLDAQVV 65 HSP 2 Score: 20.7866 bits (42), Expect = 1.187e-14 Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 1 KRVDAVDSASA 33 KRVDAVDS +A Sbjct: 8 KRVDAVDSRAA 18
BLAST of CD858934 vs. TrEMBL
Match: B9RGI3_RICCO (DNA-binding protein MNB1B, putative OS=Ricinus communis GN=RCOM_1454160 PE=4 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.273e-13 Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = 3 Query: 36 VRAKDGSAFAKCDECKKNVPVALISMHDCSLEAKIKMNLDSHVV 167 VR KDGSAFA+CDECKK+VPVALISMH CSLEA+IKMNL++ +V Sbjct: 19 VRGKDGSAFARCDECKKDVPVALISMHSCSLEARIKMNLEAQIV 62
BLAST of CD858934 vs. TrEMBL
Match: A9PB77_POPTR (High mobility group family OS=Populus trichocarpa GN=HMGB907 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.636e-13 Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 3 Query: 36 VRAKDGSAFAKCDECKKNVPVALISMHDCSLEAKIKMNLDSHVV 167 VRAKDGSAF KC+ECKK+VPVALIS H CSL+AKIKMNL++ VV Sbjct: 24 VRAKDGSAFTKCEECKKDVPVALISFHSCSLDAKIKMNLEAQVV 67
BLAST of CD858934 vs. TrEMBL
Match: A5BH75_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034306 PE=4 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.628e-11 Identity = 31/43 (72.09%), Postives = 38/43 (88.37%), Query Frame = 3 Query: 39 RAKDGSAFAKCDECKKNVPVALISMHDCSLEAKIKMNLDSHVV 167 RA+DGSAF +C+ECKK+VPV LI MH CSLEAKIK+NL++ VV Sbjct: 19 RARDGSAFIRCEECKKDVPVVLIDMHSCSLEAKIKLNLEAQVV 61
BLAST of CD858934 vs. TrEMBL
Match: Q8LDF9_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana GN=At5g23420/K19M13_4 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.524e-9 Identity = 30/43 (69.77%), Postives = 38/43 (88.37%), Query Frame = 3 Query: 39 RAKDGSAFAKCDECKKNVPVALISMHDCSLEAKIKMNLDSHVV 167 RAKDGSAFA C+ C K+V VALISMH+CSL+AKI++NL++ VV Sbjct: 31 RAKDGSAFALCEGCNKSVAVALISMHNCSLDAKIRVNLEAQVV 73
BLAST of CD858934 vs. TrEMBL
Match: D7M296_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_910356 PE=4 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.524e-9 Identity = 30/43 (69.77%), Postives = 38/43 (88.37%), Query Frame = 3 Query: 39 RAKDGSAFAKCDECKKNVPVALISMHDCSLEAKIKMNLDSHVV 167 RAKDGSAFA C+ C K+V VALISMH+CSL+AKI++NL++ VV Sbjct: 31 RAKDGSAFALCEGCNKSVAVALISMHNCSLDAKIRVNLEAQVV 73
BLAST of CD858934 vs. TrEMBL
Match: B6T1S6_MAIZE (HMG1/2-like protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 4.904e-8 Identity = 25/43 (58.14%), Postives = 34/43 (79.07%), Query Frame = 3 Query: 39 RAKDGSAFAKCDECKKNVPVALISMHDCSLEAKIKMNLDSHVV 167 R++DGSAF +C+ C K+VPV LI MH CSL+ KI+M L++ VV Sbjct: 24 RSRDGSAFTRCEACNKDVPVVLIDMHSCSLDEKIRMTLEAQVV 66
BLAST of CD858934 vs. TrEMBL
Match: A9NTD7_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 8.365e-8 Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 3 Query: 39 RAKDGSAFAKCDECKKNVPVALISMHDCSLEAKIKMNLDS 158 RA+DGS F KCD C K++PVAL MHDC LE KI+ N D+ Sbjct: 27 RARDGSGFTKCDVCNKHIPVALSDMHDCQLEDKIRSNFDA 66
BLAST of CD858934 vs. TrEMBL
Match: C5YLC2_SORBI (Putative uncharacterized protein Sb07g000230 OS=Sorghum bicolor GN=Sb07g000230 PE=4 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 4.151e-7 Identity = 24/43 (55.81%), Postives = 33/43 (76.74%), Query Frame = 3 Query: 39 RAKDGSAFAKCDECKKNVPVALISMHDCSLEAKIKMNLDSHVV 167 R++DGSAF +C+ C K+VPV LI MH CSL+ I+M L++ VV Sbjct: 24 RSRDGSAFTRCEACNKDVPVVLIDMHSCSLDKHIRMMLEAQVV 66
BLAST of CD858934 vs. TrEMBL
Match: D7LYM2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_488801 PE=4 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 5.422e-7 Identity = 26/35 (74.29%), Postives = 31/35 (88.57%), Query Frame = 3 Query: 39 RAKDGSAFAKCDECKKNVPVALISMHDCSLEAKIK 143 RAKDGSAFA C+ C K+V VALISMH+CSL+AKI+ Sbjct: 32 RAKDGSAFALCEGCNKSVAVALISMHNCSLDAKIR 66
BLAST of CD858934 vs. TAIR peptide
Match: AT5G23420.2 (| Symbols: HMGB6 | high-mobility group box 6 | chr5:7888657-7890111 REVERSE LENGTH=157) HSP 1 Score: 65.855 bits (159), Expect = 6.076e-12 Identity = 30/43 (69.77%), Postives = 38/43 (88.37%), Query Frame = 3 Query: 39 RAKDGSAFAKCDECKKNVPVALISMHDCSLEAKIKMNLDSHVV 167 RAKDGSAFA C+ C K+V VALISMH+CSL+AKI++NL++ VV Sbjct: 31 RAKDGSAFALCEGCNKSVAVALISMHNCSLDAKIRVNLEAQVV 73
BLAST of CD858934 vs. TAIR peptide
Match: AT5G23420.1 (| Symbols: HMGB6 | high-mobility group box 6 | chr5:7888712-7890111 REVERSE LENGTH=241) HSP 1 Score: 65.855 bits (159), Expect = 6.076e-12 Identity = 30/43 (69.77%), Postives = 38/43 (88.37%), Query Frame = 3 Query: 39 RAKDGSAFAKCDECKKNVPVALISMHDCSLEAKIKMNLDSHVV 167 RAKDGSAFA C+ C K+V VALISMH+CSL+AKI++NL++ VV Sbjct: 31 RAKDGSAFALCEGCNKSVAVALISMHNCSLDAKIRVNLEAQVV 73 The following BLAST results are available for this feature:
BLAST of CD858934 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of CD858934 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CD858934 ID=CD858934; Name=CD858934; organism=Pisum sativum; type=EST; length=211bpback to top |