CD860270

EST Overview
NameCD860270
Unique NameCD860270
TypeEST
OrganismPisum sativum (pea)
Sequence length499
Libraries
Library NameType
LIBEST_014002 PWcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
[Close]
BLAST of CD860270 vs. TrEMBL
Match: D7SI19_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00007875001 PE=4 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.087e-31
Identity = 69/94 (73.40%), Postives = 79/94 (84.04%), Query Frame = -3 
Query:  213 INIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLP-RTQANLQDIKVFLVSDCYIGFEQEHSIK*LVG 491
            +NIRLE++NS+R S RAF PRFPK+K E WWLVLGNTSTSEL+ALKRVSF+D LVT MKLP  T  NLQ +K+ LVSDCYIGFEQEHSI+ L G
Sbjct: 1996 LNIRLERMNSKRKSLRAFAPRFPKVKNEAWWLVLGNTSTSELFALKRVSFADRLVTHMKLPSSTPTNLQGMKLILVSDCYIGFEQEHSIEELDG 2089
[Close]
BLAST of CD860270 vs. TrEMBL
Match: A5BGX4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003945 PE=4 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.087e-31
Identity = 69/94 (73.40%), Postives = 79/94 (84.04%), Query Frame = -3 
Query:  213 INIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLP-RTQANLQDIKVFLVSDCYIGFEQEHSIK*LVG 491
            +NIRLE++NS+R S RAF PRFPK+K E WWLVLGNTSTSEL+ALKRVSF+D LVT MKLP  T  NLQ +K+ LVSDCYIGFEQEHSI+ L G
Sbjct:  336 LNIRLERMNSKRKSLRAFAPRFPKVKNEAWWLVLGNTSTSELFALKRVSFADRLVTHMKLPSSTPTNLQGMKLILVSDCYIGFEQEHSIEELDG 429
[Close]
BLAST of CD860270 vs. TrEMBL
Match: B9RLP5_RICCO (Activating signal cointegrator 1 complex subunit 3, helc1, putative OS=Ricinus communis GN=RCOM_1469910 PE=4 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.419e-31
Identity = 65/92 (70.65%), Postives = 78/92 (84.78%), Query Frame = -3 
Query:  216 INIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLPRTQANLQDIKVFLVSDCYIGFEQEHSIK*LV 491
            +NI+LEK NSR+ +SRAFVPRFPKIK+E WWL+LGNTSTSELYALKRV+FSD LVT M +P +    Q+IK+ LVSDCY+GFEQEH I+ LV
Sbjct: 2000 LNIKLEKTNSRKSTSRAFVPRFPKIKDEAWWLILGNTSTSELYALKRVTFSDRLVTHMDIPSSLTTFQEIKLMLVSDCYLGFEQEHCIEELV 2091
[Close]
BLAST of CD860270 vs. TrEMBL
Match: Q9FNQ1_ARATH (RNA helicase OS=Arabidopsis thaliana GN=At5g61140 PE=4 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.374e-26
Identity = 58/89 (65.17%), Postives = 73/89 (82.02%), Query Frame = -3 
Query:  225 INIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLPRTQANLQDIKVFLVSDCYIGFEQEHSIK 491
            + IRLEK  S+R+SSRA  PRFPK+K+E WWLVLG+TSTSEL+A+KRVSF+  L+T M+LP    + QD K+ LVSDCY+GFEQEHSI+
Sbjct: 2064 LEIRLEK-TSKRNSSRALAPRFPKVKDEAWWLVLGDTSTSELFAVKRVSFTGRLITRMELPPNITSFQDTKLILVSDCYLGFEQEHSIE 2151
[Close]
BLAST of CD860270 vs. TrEMBL
Match: Q8RY91_ARATH (Putative RNA helicase (Fragment) OS=Arabidopsis thaliana GN=At5g61140 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.374e-26
Identity = 58/89 (65.17%), Postives = 73/89 (82.02%), Query Frame = -3 
Query:  225 INIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLPRTQANLQDIKVFLVSDCYIGFEQEHSIK 491
            + IRLEK  S+R+SSRA  PRFPK+K+E WWLVLG+TSTSEL+A+KRVSF+  L+T M+LP    + QD K+ LVSDCY+GFEQEHSI+
Sbjct:  712 LEIRLEK-TSKRNSSRALAPRFPKVKDEAWWLVLGDTSTSELFAVKRVSFTGRLITRMELPPNITSFQDTKLILVSDCYLGFEQEHSIE 799
[Close]
BLAST of CD860270 vs. TrEMBL
Match: D7MUH8_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_919354 PE=4 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.795e-26
Identity = 58/89 (65.17%), Postives = 73/89 (82.02%), Query Frame = -3 
Query:  225 INIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLPRTQANLQDIKVFLVSDCYIGFEQEHSIK 491
            + IRLEK  S+R+SSRA  PRFPK+K+E WWLVLG+ STSEL+A+KRVSF+  L+T M+LP T  + QD K+ LVSDCY+GFEQEHSI+
Sbjct: 2020 LEIRLEK-TSKRNSSRALAPRFPKVKDEAWWLVLGDISTSELFAVKRVSFTGRLITRMELPPTITSFQDTKLILVSDCYLGFEQEHSIE 2107
[Close]
BLAST of CD860270 vs. TrEMBL
Match: D5ACR9_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 9.850e-25
Identity = 53/82 (64.63%), Postives = 64/82 (78.05%), Query Frame = -3 
Query:  228 KLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLPRTQANLQDIKVFLVSDCYIGFEQEHSI 473
            KL   +  SRAF PRFPKIK+E WWLVLGNT T ELYALKR+SFSDHL TSM +   Q NL+  K+ LVSDCY+GFEQ++++
Sbjct:  101 KLRRTKSGSRAFAPRFPKIKDEAWWLVLGNTKTWELYALKRISFSDHLTTSMVITPDQMNLEGTKLLLVSDCYLGFEQQYTV 182
[Close]
BLAST of CD860270 vs. TrEMBL
Match: C5WSU0_SORBI (Putative uncharacterized protein Sb01g042980 OS=Sorghum bicolor GN=Sb01g042980 PE=4 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.683e-22
Identity = 52/90 (57.78%), Postives = 71/90 (78.89%), Query Frame = -3 
Query:  225 INIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLV-TSMKLPRTQANLQDIKVFLVSDCYIGFEQEHSIK 491
            +NIRL+  NSRR +SRAF PRFPK K+E WWLVLGN ++SELY LKR+SF+D +V T M+LP+   + Q+ K+ LVSDCY+GF+ E+ ++
Sbjct: 1991 LNIRLQLKNSRRSASRAFAPRFPKAKQEAWWLVLGNATSSELYGLKRISFADRVVNTRMELPQ-MFDAQETKLILVSDCYLGFDLEYYLE 2079
[Close]
BLAST of CD860270 vs. TrEMBL
Match: Q10Q15_ORYSJ (Activating signal cointegrator 1 complex subunit 3, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g11470 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.127e-20
Identity = 50/90 (55.56%), Postives = 70/90 (77.78%), Query Frame = -3 
Query:  228 IINIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLV-TSMKLPRTQANLQDIKVFLVSDCYIGFEQEHSI 494
            I++IRL+  ++RR +SRAF PRFPK K+E WWLVLGN  +SELY LKR++F D +V T M+LP    ++Q+ K+ LVSD Y+GF+QE+S+
Sbjct: 1031 ILSIRLQMKDARRSTSRAFSPRFPKAKQEAWWLVLGNIRSSELYGLKRINFMDRVVNTRMELP-AMFDIQETKLILVSDSYLGFDQEYSL 1119
[Close]
BLAST of CD860270 vs. TrEMBL
Match: Q0DU12_ORYSJ (Os03g0213400 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os03g0213400 PE=4 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.127e-20
Identity = 50/90 (55.56%), Postives = 70/90 (77.78%), Query Frame = -3 
Query:  228 IINIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLV-TSMKLPRTQANLQDIKVFLVSDCYIGFEQEHSI 494
            I++IRL+  ++RR +SRAF PRFPK K+E WWLVLGN  +SELY LKR++F D +V T M+LP    ++Q+ K+ LVSD Y+GF+QE+S+
Sbjct: 1044 ILSIRLQMKDARRSTSRAFSPRFPKAKQEAWWLVLGNIRSSELYGLKRINFMDRVVNTRMELP-AMFDIQETKLILVSDSYLGFDQEYSL 1132
[Close]
BLAST of CD860270 vs. SwissProt
Match: RBS3_PEA (Ribulose bisphosphate carboxylase small chain 3A, chloroplastic OS=Pisum sativum GN=RBCS-3A PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 3.809e-20
Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = -1 
Query:   38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184
            F TTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY
Sbjct:  132 FGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 180
[Close]
BLAST of CD860270 vs. SwissProt
Match: RBS2_PEA (Ribulose bisphosphate carboxylase small chain 3C, chloroplastic OS=Pisum sativum GN=RBCS-3C PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 3.809e-20
Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = -1 
Query:   38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184
            F TTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY
Sbjct:  132 FGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 180
[Close]
BLAST of CD860270 vs. SwissProt
Match: RBS1_PEA (Ribulose bisphosphate carboxylase small chain, chloroplastic (Fragment) OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.770e-17
Identity = 41/49 (83.67%), Postives = 47/49 (95.92%), Query Frame = -1 
Query:   38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184
            F TTD +QV+KE+DEVVAAYP+AFVR+IGF+NVRQVQCISFIAHTPESY
Sbjct:   88 FGTTDPAQVVKEVDEVVAAYPEAFVRVIGFNNVRQVQCISFIAHTPESY 136
[Close]
BLAST of CD860270 vs. SwissProt
Match: RBS_MEDSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.123e-14
Identity = 36/49 (73.47%), Postives = 42/49 (85.71%), Query Frame = -1 
Query:   38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184
            F  TD+SQVLKEL +  A YP +F+RIIGFDNVRQVQCISFIAHTP++Y
Sbjct:  132 FGATDSSQVLKELADCKAEYPDSFIRIIGFDNVRQVQCISFIAHTPKNY 180
[Close]
BLAST of CD860270 vs. SwissProt
Match: RBS_TRIRP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.328e-14
Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = -1 
Query:   38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184
            F TTDA+QVLKE+ E  A YP+AF+RIIGFDNVRQVQCISFIA TP+ Y
Sbjct:  130 FGTTDAAQVLKEVAECKAEYPEAFIRIIGFDNVRQVQCISFIASTPKVY 178
[Close]
BLAST of CD860270 vs. SwissProt
Match: RBS_GLYTA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tabacina GN=RBCS PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.958e-14
Identity = 37/49 (75.51%), Postives = 40/49 (81.63%), Query Frame = -1 
Query:   38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184
            F  TDASQVLKEL E   AYP AF+RIIGFDNVRQVQCISFIA+ P S+
Sbjct:  130 FGCTDASQVLKELQEAKTAYPNAFIRIIGFDNVRQVQCISFIAYKPPSF 178
[Close]
BLAST of CD860270 vs. SwissProt
Match: RBS_PYRPY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.025e-13
Identity = 35/49 (71.43%), Postives = 41/49 (83.67%), Query Frame = -1 
Query:   38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184
            F  TD+SQVLKEL+E   AYPQ+F+RIIGFDNVRQVQCISFIA+ P  +
Sbjct:  135 FGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAGF 183
[Close]
BLAST of CD860270 vs. SwissProt
Match: RBS_MALSP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. GN=RBCS PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.025e-13
Identity = 35/49 (71.43%), Postives = 41/49 (83.67%), Query Frame = -1 
Query:   38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184
            F  TD+SQVLKEL+E   AYPQ+F+RIIGFDNVRQVQCISFIA+ P  +
Sbjct:  135 FGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAGF 183
[Close]
BLAST of CD860270 vs. SwissProt
Match: RBS_GLYTO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tomentella GN=RBCS PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.025e-13
Identity = 36/49 (73.47%), Postives = 39/49 (79.59%), Query Frame = -1 
Query:   38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184
            F  TDASQVLKEL E   AYP  F+RIIGFDNVRQVQCISFIA+ P S+
Sbjct:  130 FGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPSF 178
[Close]
BLAST of CD860270 vs. SwissProt
Match: RBS8_NICPL (Ribulose bisphosphate carboxylase small chain 8B, chloroplastic OS=Nicotiana plumbaginifolia GN=RBCS-8B PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.025e-13
Identity = 36/49 (73.47%), Postives = 41/49 (83.67%), Query Frame = -1 
Query:   38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184
            F  TDA+QVL E++E   AYPQA+VRIIGFDNVRQVQCISFIA+ PE Y
Sbjct:  132 FGCTDATQVLAEVEEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEGY 180
[Close]
BLAST of CD860270 vs. TAIR peptide
Match: AT5G61140.2 (| Symbols: | U5 small nuclear ribonucleoprotein helicase | chr5:24589999-24603311 FORWARD LENGTH=2157)

HSP 1 Score: 122.479 bits (306), Expect = 1.208e-28
Identity = 58/89 (65.17%), Postives = 73/89 (82.02%), Query Frame = -3 
Query:  225 INIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLPRTQANLQDIKVFLVSDCYIGFEQEHSIK 491
            + IRLEK  S+R+SSRA  PRFPK+K+E WWLVLG+TSTSEL+A+KRVSF+  L+T M+LP    + QD K+ LVSDCY+GFEQEHSI+
Sbjct: 2064 LEIRLEK-TSKRNSSRALAPRFPKVKDEAWWLVLGDTSTSELFAVKRVSFTGRLITRMELPPNITSFQDTKLILVSDCYLGFEQEHSIE 2151
[Close]
BLAST of CD860270 vs. TAIR peptide
Match: AT5G61140.1 (| Symbols: | U5 small nuclear ribonucleoprotein helicase | chr5:24589999-24603311 FORWARD LENGTH=2146)

HSP 1 Score: 122.479 bits (306), Expect = 1.208e-28
Identity = 58/89 (65.17%), Postives = 73/89 (82.02%), Query Frame = -3 
Query:  225 INIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLPRTQANLQDIKVFLVSDCYIGFEQEHSIK 491
            + IRLEK  S+R+SSRA  PRFPK+K+E WWLVLG+TSTSEL+A+KRVSF+  L+T M+LP    + QD K+ LVSDCY+GFEQEHSI+
Sbjct: 2053 LEIRLEK-TSKRNSSRALAPRFPKVKDEAWWLVLGDTSTSELFAVKRVSFTGRLITRMELPPNITSFQDTKLILVSDCYLGFEQEHSIE 2140
[Close]
BLAST of CD860270 vs. TAIR peptide
Match: AT1G67090.1 (| Symbols: RBCS1A | ribulose bisphosphate carboxylase small chain 1A | chr1:25048465-25049249 REVERSE LENGTH=180)

HSP 1 Score: 69.707 bits (169), Expect = 9.421e-13
Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = -1 
Query:   38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184
            F  TD++QVLKE++E    YP AF+RIIGFDN RQVQCISFIA+ P S+
Sbjct:  130 FGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPPSF 178
[Close]
BLAST of CD860270 vs. TAIR peptide
Match: AT5G38410.3 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=186)

HSP 1 Score: 68.9366 bits (167), Expect = 1.607e-12
Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = -1 
Query:   38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184
            F  TD++QVLKE++E    YP AF+RIIGFDN RQVQCISFIA+ P S+
Sbjct:  135 FGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 183
[Close]
BLAST of CD860270 vs. TAIR peptide
Match: AT5G38410.2 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=174)

HSP 1 Score: 68.9366 bits (167), Expect = 1.607e-12
Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = -1 
Query:   38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184
            F  TD++QVLKE++E    YP AF+RIIGFDN RQVQCISFIA+ P S+
Sbjct:  123 FGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 171
[Close]
BLAST of CD860270 vs. TAIR peptide
Match: AT5G38410.1 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=181)

HSP 1 Score: 68.9366 bits (167), Expect = 1.607e-12
Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = -1 
Query:   38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184
            F  TD++QVLKE++E    YP AF+RIIGFDN RQVQCISFIA+ P S+
Sbjct:  130 FGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 178
[Close]
BLAST of CD860270 vs. TAIR peptide
Match: AT5G38420.1 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15381203-15381978 REVERSE LENGTH=181)

HSP 1 Score: 68.9366 bits (167), Expect = 1.607e-12
Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = -1 
Query:   38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184
            F  TD++QVLKE++E    YP AF+RIIGFDN RQVQCISFIA+ P S+
Sbjct:  130 FGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 178
[Close]
BLAST of CD860270 vs. TAIR peptide
Match: AT5G38430.1 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15384350-15385155 REVERSE LENGTH=181)

HSP 1 Score: 68.9366 bits (167), Expect = 1.607e-12
Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = -1 
Query:   38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184
            F  TD++QVLKE++E    YP AF+RIIGFDN RQVQCISFIA+ P S+
Sbjct:  130 FGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 178
[Close]
BLAST of CD860270 vs. TAIR peptide
Match: AT2G42270.1 (| Symbols: | U5 small nuclear ribonucleoprotein helicase | chr2:17604330-17610848 FORWARD LENGTH=2172)

HSP 1 Score: 56.9954 bits (136), Expect = 6.233e-9
Identity = 28/89 (31.46%), Postives = 48/89 (53.93%), Query Frame = -3 
Query:  231 INIRLEK-LNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLP-RTQANLQDIKVFLVSDCYIGFEQEHS 491
            + + LE+ +  R        PR+PK KEE WWLV+G   T++L A+KR+S        ++    T+   +   ++ + D Y+G +QE+S
Sbjct: 2068 LQVLLERDMEGRTEVGPVDAPRYPKTKEEGWWLVVGEAKTNQLMAIKRISLQRKAQVKLEFAVPTETGEKSYTLYFMCDSYLGCDQEYS 2156
[Close]
BLAST of CD860270 vs. TAIR peptide
Match: AT1G20960.2 (| Symbols: emb1507 | U5 small nuclear ribonucleoprotein helicase, putative | chr1:7302591-7309914 REVERSE LENGTH=2171)

HSP 1 Score: 55.0694 bits (131), Expect = 2.368e-8
Identity = 25/68 (36.76%), Postives = 42/68 (61.76%), Query Frame = -3 
Query:  231 RFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLPR-TQANLQDIKVFLVSDCYIGFEQEHS 431
            R+PK KEE WWLV+G+T T++L A+KRVS    +   +     ++   +   ++ + D Y+G +QE+S
Sbjct: 2088 RYPKTKEEGWWLVVGDTKTNQLLAIKRVSLQRKVKVKLDFTAPSEPGEKSYTLYFMCDSYLGCDQEYS 2155
The following BLAST results are available for this feature:
BLAST of CD860270 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7SI19_VITVI1.087e-3173.40Whole genome shotgun sequence of line PN40024, sca... [more]
A5BGX4_VITVI1.087e-3173.40Putative uncharacterized protein OS=Vitis vinifera... [more]
B9RLP5_RICCO1.419e-3170.65Activating signal cointegrator 1 complex subunit 3... [more]
Q9FNQ1_ARATH1.374e-2665.17RNA helicase OS=Arabidopsis thaliana GN=At5g61140 ... [more]
Q8RY91_ARATH1.374e-2665.17Putative RNA helicase (Fragment) OS=Arabidopsis th... [more]
D7MUH8_ARALY1.795e-2665.17Putative uncharacterized protein OS=Arabidopsis ly... [more]
D5ACR9_PICSI9.850e-2564.63Putative uncharacterized protein OS=Picea sitchens... [more]
C5WSU0_SORBI2.683e-2257.78Putative uncharacterized protein Sb01g042980 OS=So... [more]
Q10Q15_ORYSJ1.127e-2055.56Activating signal cointegrator 1 complex subunit 3... [more]
Q0DU12_ORYSJ1.127e-2055.56Os03g0213400 protein (Fragment) OS=Oryza sativa su... [more]
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BLAST of CD860270 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RBS3_PEA3.809e-2097.96Ribulose bisphosphate carboxylase small chain 3A, ... [more]
RBS2_PEA3.809e-2097.96Ribulose bisphosphate carboxylase small chain 3C, ... [more]
RBS1_PEA1.770e-1783.67Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_MEDSA3.123e-1473.47Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_TRIRP5.328e-1475.51Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_GLYTA6.958e-1475.51Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_PYRPY2.025e-1371.43Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_MALSP2.025e-1371.43Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_GLYTO2.025e-1373.47Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS8_NICPL2.025e-1373.47Ribulose bisphosphate carboxylase small chain 8B, ... [more]
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BLAST of CD860270 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 10
Match NameE-valueIdentityDescription
AT5G61140.21.208e-2865.17| Symbols: | U5 small nuclear ribonucleoprotein h... [more]
AT5G61140.11.208e-2865.17| Symbols: | U5 small nuclear ribonucleoprotein h... [more]
AT1G67090.19.421e-1365.31| Symbols: RBCS1A | ribulose bisphosphate carboxyl... [more]
AT5G38410.31.607e-1265.31| Symbols: | Ribulose bisphosphate carboxylase (s... [more]
AT5G38410.21.607e-1265.31| Symbols: | Ribulose bisphosphate carboxylase (s... [more]
AT5G38410.11.607e-1265.31| Symbols: | Ribulose bisphosphate carboxylase (s... [more]
AT5G38420.11.607e-1265.31| Symbols: | Ribulose bisphosphate carboxylase (s... [more]
AT5G38430.11.607e-1265.31| Symbols: | Ribulose bisphosphate carboxylase (s... [more]
AT2G42270.16.233e-931.46| Symbols: | U5 small nuclear ribonucleoprotein h... [more]
AT1G20960.22.368e-836.76| Symbols: emb1507 | U5 small nuclear ribonucleopr... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 2..26
score
NoneNo IPR availableGENE3D2.60.40.150no descriptioncoord: 3..91
score: 6.1
NoneNo IPR availablePANTHERPTHR11752HELICASE SKI2Wcoord: 1..91
score: 4.8
NoneNo IPR availablePANTHERPTHR11752:SF8ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 3, HELC1coord: 1..91
score: 4.8
IPR000894Ribulose bisphosphate carboxylase, small chainGENE3D3.30.190.10no descriptioncoord: 11..58
score: 5.4
IPR000894Ribulose bisphosphate carboxylase, small chainPFAMPF00101RuBisCO_smallcoord: 11..56
score: 4.6
IPR000894Ribulose bisphosphate carboxylase, small chainSUPERFAMILY55239RuBisCO, small subunitcoord: 11..59
score: 3.6
IPR004179Sec63 domainPFAMPF02889Sec63coord: 15..90
score: 2.3

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CD860270 ID=CD860270; Name=CD860270; organism=Pisum sativum; type=EST; length=499bp
AGAAACAGTTTTTCCAATGCCATAATACTCAAACTCAGTAGGATTCTGGT
GTGTGCGCAATGAAACTGATGCATTGAACTTGACGAACGTTGTCGAAACC
GATGATACGGACGAAAGCTTGGGGGTAAGCGGCAACAACTTCATCAAGCT
CCTTCAAGACTTGAGAAGCATCAGTGGTACAAAATCTCTGACCAAAGACT
ATTAGCTGACATTCCTACAAGTTATTTAATGGAATGCTCTTGTTCAAATC
CAATGTAACAGTCAGAGACTAGAAACACTTTTATATCCTGAAGATTAGCT
TGAGTTCGAGGCAACTTCATCGATGTAACTAAGTGATCCGAAAAAGAAAC
TCTTTTCAGTGCATATAGCTCAGAGGTAGAGGTATTACCAAGAACCAGCC
ACCATTGCTCCTCTTTTATCTTTGGAAATCGAGGAACAAATGCTCTTGAT
GAGTGTCGTCTAGAATTGAGCTTTTCTAATCTGATGTTTATTATGTGGC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Biological Process
TermDefinition
GO:0015977carbon fixation
Vocabulary: Molecular Function
TermDefinition
GO:0016984ribulose-bisphosphate carboxylase activity
Vocabulary: INTERPRO
TermDefinition
IPR024681RuBisCO_ssu
IPR004179Sec63-dom