CD858720

EST Overview
NameCD858720
Unique NameCD858720
TypeEST
OrganismPisum sativum (pea)
Sequence length510
Libraries
Library NameType
LIBEST_013996 CEcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of CD858720 vs. TrEMBL
Match: B7FGX3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.506e-10
Identity = 34/51 (66.67%), Postives = 34/51 (66.67%), Query Frame = -1
Query:  358 SSWVVVXXXXXXXXXXXXXXXXXGCVRANFGNNPAVRVEGFDCLDRDSRNC 510
            SSWVVV                 GCVRANFGNNPAVRVEGFDCLDRDSRNC
Sbjct:  104 SSWVVVPAPSGLPPSPPSSARKGGCVRANFGNNPAVRVEGFDCLDRDSRNC 154          
BLAST of CD858720 vs. TrEMBL
Match: C6T416_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.375e-8
Identity = 26/28 (92.86%), Postives = 27/28 (96.43%), Query Frame = -1
Query:  355 CVRANFGNNPAVRVEGFDCLDRDSRNCS 438
            CVRANFGNNPAVR+EGFDCLDRD RNCS
Sbjct:  143 CVRANFGNNPAVRIEGFDCLDRDRRNCS 170          
BLAST of CD858720 vs. TrEMBL
Match: D7T944_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011892001 PE=4 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.796e-8
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = -1
Query:  355 CVRANFGNNPAVRVEGFDCLDRDSRNCS 438
            C+RANFGNNPAVR+EGFDCLDRD RNCS
Sbjct:  142 CIRANFGNNPAVRIEGFDCLDRDRRNCS 169          
BLAST of CD858720 vs. TrEMBL
Match: B9T053_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0029900 PE=4 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.986e-7
Identity = 25/28 (89.29%), Postives = 26/28 (92.86%), Query Frame = -1
Query:  355 CVRANFGNNPAVRVEGFDCLDRDSRNCS 438
            CVRANFGN PAVRVEGFDCLDRD R+CS
Sbjct:  157 CVRANFGNKPAVRVEGFDCLDRDRRSCS 184          
BLAST of CD858720 vs. TAIR peptide
Match: AT1G68490.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:25693926-25694946 FORWARD LENGTH=183)

HSP 1 Score: 56.225 bits (134), Expect = 1.137e-8
Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = -1
Query:  355 VRANFGNNPAVRVEGFDCLDRDSRNCS 435
            VR NFGN+P VRVEGFDCLDRDSRNCS
Sbjct:  152 VRGNFGNSPKVRVEGFDCLDRDSRNCS 178          
The following BLAST results are available for this feature:
BLAST of CD858720 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
B7FGX3_MEDTR2.506e-1066.67Putative uncharacterized protein OS=Medicago trunc... [more]
C6T416_SOYBN1.375e-892.86Putative uncharacterized protein OS=Glycine max PE... [more]
D7T944_VITVI1.796e-889.29Whole genome shotgun sequence of line PN40024, sca... [more]
B9T053_RICCO1.986e-789.29Putative uncharacterized protein OS=Ricinus commun... [more]
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BLAST of CD858720 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT1G68490.11.137e-888.89| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 7..24
score
NoneNo IPR availableSEGsegsegcoord: 4..21
score: NAcoord: 55..66
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CD858720 ID=CD858720; Name=CD858720; organism=Pisum sativum; type=EST; length=510bp
AGCGTGGTCGCGGCCGAGGTACAAGATAGGTCATATAACACCCAAATTAA
CCCTCAATCAGCGACCTTGACCTCATTATTTAGTGGACTATATATACGTT
ATTCCTAAACAAGACACAAACTATTGACATTTACATACACCGACACTGAT
CGATTAAACTCAACATATTTACAAACAAGATAAAATTTTAACTTTCTTTT
TTTCCTCTTCATACTCTGGACATCCAAAATTCCTTTCCCGTGGCTCTTAT
ATGGTTGTTGTTGTTGTATTTCTGTAGTAAACTGAAACTGAAATTCTAGT
GTCAAAAGATGTGTATATTAAGTTGTTGTTGTAGTTCTAAGCCAAGGCAG
GGATGCTGCAATTTCGGCTATCCCTGTCGAGGCAATCAAATCCTTCAACT
CTCACCGCCGGATTGTTGCCAAAATTGGCCCGAACACATCCTCCCTTCCT
TCCAGAGGATGAGGGAGACGGTGGCAGACCGGATTGGGTGGGAACCACCA
CCCAAGACGA
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