CD859084

EST Overview


Name	CD859084
Unique Name	CD859084
Type	EST
Organism	Pisum sativum (pea)
Sequence length	339

Libraries


Library Name	Type
LIBEST_013998 CNE	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Pisum sativum unigene v1	Pisum sativum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Pisum sativum unigene v1	2010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Pisum sativum unigene v1	2010-12-29

Homology

[Close]

BLAST of CD859084 vs. TrEMBL
Match: A9YWS0_MEDTR (Serine hydroxymethyltransferase OS=Medicago truncatula PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 5.257e-50
Identity = 100/111 (90.09%), Postives = 107/111 (96.40%), Query Frame = 1

Query:    7 VAAEVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMK 339
            V   VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDA+V+LALK+KAESKGTKLKDFVE LQ+SSYVQSEISKL+HDVEEFAKQFPTIGFEK++MK
Sbjct:  405 VLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDASVNLALKIKAESKGTKLKDFVETLQSSSYVQSEISKLRHDVEEFAKQFPTIGFEKSSMK 515

[Close]

BLAST of CD859084 vs. TrEMBL
Match: D7M9M1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_490821 PE=4 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.750e-45
Identity = 91/111 (81.98%), Postives = 103/111 (92.79%), Query Frame = 1

Query:    7 VAAEVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMK 339
            V   VHIA+NKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF KVAEYFD AV+LALKVK+E++GTKLKDFV A+++SS +QSEI+KL+H+VEEFAKQFPTIGFEK TMK
Sbjct:  404 VLEAVHIASNKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTLALKVKSEAQGTKLKDFVSAMESSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMK 514

[Close]

BLAST of CD859084 vs. TrEMBL
Match: C6ZJZ0_SOYBN (Serine hydroxymethyltransferase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.750e-45
Identity = 91/111 (81.98%), Postives = 102/111 (91.89%), Query Frame = 1

Query:    7 VAAEVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMK 339
            V   VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAE+FDAAV LA+K+K +SKGTKLKDF+  +Q+SS  QSEI+KL+HDVE++AKQFPTIGFEKATMK
Sbjct:  405 VLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEFFDAAVKLAVKIKGQSKGTKLKDFLATIQSSSTFQSEIAKLRHDVEDYAKQFPTIGFEKATMK 515

[Close]

BLAST of CD859084 vs. TrEMBL
Match: D7T5C1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_211.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00003859001 PE=4 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 5.092e-45
Identity = 89/111 (80.18%), Postives = 103/111 (92.79%), Query Frame = 1

Query:    7 VAAEVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMK 339
            V   VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAV++A+K+KAE+ GTKLKDF+  +Q+S ++QSEI+KL+H+VEE+AKQFPTIGFEK TMK
Sbjct:  405 VLESVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVTVAVKIKAETTGTKLKDFLATMQSSPHLQSEIAKLRHEVEEYAKQFPTIGFEKETMK 515

[Close]

BLAST of CD859084 vs. TrEMBL
Match: Q7Y1F0_ORYSJ (Serine hydroxymethyltransferase OS=Oryza sativa subsp. japonica GN=OSJNBa0057G07.17 PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.134e-44
Identity = 91/111 (81.98%), Postives = 100/111 (90.09%), Query Frame = 1

Query:    7 VAAEVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMK 339
            V   VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF KVA++FDAAV+LALKVKA + GTKLKDFV  LQ+ S +QSEI+KL+HDVEE+AKQFPTIGFEK TMK
Sbjct:  444 VLENVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVADFFDAAVNLALKVKAAAGGTKLKDFVATLQSDSNIQSEIAKLRHDVEEYAKQFPTIGFEKETMK 554

[Close]

BLAST of CD859084 vs. TrEMBL
Match: Q10D68_ORYSJ (Serine hydroxymethyltransferase OS=Oryza sativa subsp. japonica GN=Os03g0738400 PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.134e-44
Identity = 91/111 (81.98%), Postives = 100/111 (90.09%), Query Frame = 1

Query:    7 VAAEVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMK 339
            V   VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF KVA++FDAAV+LALKVKA + GTKLKDFV  LQ+ S +QSEI+KL+HDVEE+AKQFPTIGFEK TMK
Sbjct:  400 VLENVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVADFFDAAVNLALKVKAAAGGTKLKDFVATLQSDSNIQSEIAKLRHDVEEYAKQFPTIGFEKETMK 510

[Close]

BLAST of CD859084 vs. TrEMBL
Match: Q10D67_ORYSJ (Serine hydroxymethyltransferase OS=Oryza sativa subsp. japonica GN=LOC_Os03g52840 PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.134e-44
Identity = 91/111 (81.98%), Postives = 100/111 (90.09%), Query Frame = 1

Query:    7 VAAEVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMK 339
            V   VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF KVA++FDAAV+LALKVKA + GTKLKDFV  LQ+ S +QSEI+KL+HDVEE+AKQFPTIGFEK TMK
Sbjct:  351 VLENVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVADFFDAAVNLALKVKAAAGGTKLKDFVATLQSDSNIQSEIAKLRHDVEEYAKQFPTIGFEKETMK 461

[Close]

BLAST of CD859084 vs. TrEMBL
Match: B9FBQ3_ORYSJ (Serine hydroxymethyltransferase OS=Oryza sativa subsp. japonica GN=OsJ_12499 PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.134e-44
Identity = 91/111 (81.98%), Postives = 100/111 (90.09%), Query Frame = 1

Query:    7 VAAEVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMK 339
            V   VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF KVA++FDAAV+LALKVKA + GTKLKDFV  LQ+ S +QSEI+KL+HDVEE+AKQFPTIGFEK TMK
Sbjct:  376 VLENVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVADFFDAAVNLALKVKAAAGGTKLKDFVATLQSDSNIQSEIAKLRHDVEEYAKQFPTIGFEKETMK 486

[Close]

BLAST of CD859084 vs. TrEMBL
Match: B8AJX7_ORYSI (Serine hydroxymethyltransferase OS=Oryza sativa subsp. indica GN=OsI_13440 PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.134e-44
Identity = 91/111 (81.98%), Postives = 100/111 (90.09%), Query Frame = 1

Query:    7 VAAEVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMK 339
            V   VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF KVA++FDAAV+LALKVKA + GTKLKDFV  LQ+ S +QSEI+KL+HDVEE+AKQFPTIGFEK TMK
Sbjct:  400 VLENVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVADFFDAAVNLALKVKAAAGGTKLKDFVATLQSDSNIQSEIAKLRHDVEEYAKQFPTIGFEKETMK 510

[Close]

BLAST of CD859084 vs. TrEMBL
Match: B7E588_ORYSJ (Serine hydroxymethyltransferase OS=Oryza sativa subsp. japonica PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.134e-44
Identity = 91/111 (81.98%), Postives = 100/111 (90.09%), Query Frame = 1

Query:    7 VAAEVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMK 339
            V   VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF KVA++FDAAV+LALKVKA + GTKLKDFV  LQ+ S +QSEI+KL+HDVEE+AKQFPTIGFEK TMK
Sbjct:  314 VLENVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVADFFDAAVNLALKVKAAAGGTKLKDFVATLQSDSNIQSEIAKLRHDVEEYAKQFPTIGFEKETMK 424

[Close]

BLAST of CD859084 vs. SwissProt
Match: GLYM_PEA (Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 4.213e-54
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 1

Query:   19 VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMK 339
            VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMK
Sbjct:  409 VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMK 515

[Close]

BLAST of CD859084 vs. SwissProt
Match: GLYM_ARATH (Serine hydroxymethyltransferase, mitochondrial OS=Arabidopsis thaliana GN=SHM1 PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.451e-46
Identity = 90/111 (81.08%), Postives = 103/111 (92.79%), Query Frame = 1

Query:    7 VAAEVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMK 339
            V   VHIA+NKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF KVAEYFD AV++ALKVK+E++GTKLKDFV A+++SS +QSEI+KL+H+VEEFAKQFPTIGFEK TMK
Sbjct:  404 VLEAVHIASNKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKDFVSAMESSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMK 514

[Close]

BLAST of CD859084 vs. SwissProt
Match: GLYM_SOLTU (Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 1.605e-45
Identity = 88/111 (79.28%), Postives = 103/111 (92.79%), Query Frame = 1

Query:    7 VAAEVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMK 339
            V   VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGF+EEDFVKVA++FDAAV +A+KVKAE++GTKLKDFV  L++S+ ++SEI+KL+HDVEE+AKQFPTIGFEK TMK
Sbjct:  405 VLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFVKVADFFDAAVKIAVKVKAETQGTKLKDFVATLESSAPIKSEIAKLRHDVEEYAKQFPTIGFEKETMK 515

[Close]

BLAST of CD859084 vs. SwissProt
Match: GLYM_FLAPR (Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria pringlei PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.774e-44
Identity = 90/111 (81.08%), Postives = 99/111 (89.19%), Query Frame = 1

Query:    7 VAAEVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMK 339
            V   VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF KVA +FD AV LA+K+K E+KGTKLKDFV A++ SS +QSEISKL+HDVEE+AKQFPTIGFEK TMK
Sbjct:  405 VLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDLAVKLAVKIKGEAKGTKLKDFVTAME-SSAIQSEISKLRHDVEEYAKQFPTIGFEKETMK 514

[Close]

BLAST of CD859084 vs. SwissProt
Match: GLYN_FLAPR (Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria pringlei PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 6.742e-44
Identity = 89/111 (80.18%), Postives = 99/111 (89.19%), Query Frame = 1

Query:    7 VAAEVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMK 339
            V   VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF KVA  FD AV LA+K+K E++GTKLKDFV A+Q+S++ QSEISKL+HDVEE+AKQFPTIGFEK TMK
Sbjct:  405 VLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYLFDLAVKLAVKIKGEAQGTKLKDFVAAMQSSAF-QSEISKLRHDVEEYAKQFPTIGFEKETMK 514

[Close]

BLAST of CD859084 vs. SwissProt
Match: GLYM_BOVIN (Serine hydroxymethyltransferase, mitochondrial OS=Bos taurus GN=SHMT2 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.237e-21
Identity = 52/102 (50.98%), Postives = 69/102 (67.65%), Query Frame = 1

Query:   19 VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFE 324
            V I ANKNT PGD SA+ PGG+R+G PALTSRGF+E+DF KV  + D  V++ L+VK  SK TKL+DF   L        +++ L+  VE+FA+ FP  GF+
Sbjct:  403 VSITANKNTCPGDRSAITPGGLRLGAPALTSRGFLEDDFRKVVGFIDEGVNIGLEVK--SKTTKLQDFKSFLLKDPETSHQLADLRQRVEQFARAFPMPGFD 502

[Close]

BLAST of CD859084 vs. SwissProt
Match: GLYC_CAEEL (Serine hydroxymethyltransferase OS=Caenorhabditis elegans GN=mel-32 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 6.141e-21
Identity = 52/101 (51.49%), Postives = 67/101 (66.34%), Query Frame = 1

Query:   22 HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFE 324
            HIA NKNT PGDVSA+ PGGIR+GTPALTSRGF E+DF KV ++    V +A K  AE+ G  LKDF    +T+   + +++ L   VEEF+ +F   G E
Sbjct:  406 HIACNKNTCPGDVSALRPGGIRLGTPALTSRGFQEQDFEKVGDFIHEGVQIAKKYNAEA-GKTLKDFKSFTETNEPFKKDVADLAKRVEEFSTKFEIPGNE 505

[Close]

BLAST of CD859084 vs. SwissProt
Match: GLYC_CAEBR (Serine hydroxymethyltransferase OS=Caenorhabditis briggsae GN=mel-32 PE=3 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 6.141e-21
Identity = 52/99 (52.53%), Postives = 66/99 (66.67%), Query Frame = 1

Query:   22 HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIG 318
            HIA NKNT PGDVSA+ PGGIR+GTPALTSRGF E+DF KV ++    V +A K  AE+ G  LKDF     T+   + E+++L   VEEF+ +F   G
Sbjct:  410 HIACNKNTCPGDVSALRPGGIRLGTPALTSRGFKEQDFEKVGDFIHEGVQIAKKYNAEA-GKTLKDFKAFTATNEQFKQEVAELAKRVEEFSGKFEIPG 507

[Close]

BLAST of CD859084 vs. SwissProt
Match: GLYM_HUMAN (Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens GN=SHMT2 PE=1 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 1.787e-20
Identity = 50/103 (48.54%), Postives = 68/103 (66.02%), Query Frame = 1

Query:   19 VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEK 327
            V I ANKNT PGD SA+ PGG+R+G PALTSR F E+DF +V ++ D  V++ L+VK  SK  KL+DF   L   S     ++ L+  VE+FA+ FP  GF++
Sbjct:  403 VSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVK--SKTAKLQDFKSFLLKDSETSQRLANLRQRVEQFARAFPMPGFDE 503

[Close]

BLAST of CD859084 vs. SwissProt
Match: GLYM_CANAL (Serine hydroxymethyltransferase, mitochondrial OS=Candida albicans GN=SHM1 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.580e-19
Identity = 44/104 (42.31%), Postives = 71/104 (68.27%), Query Frame = 1

Query:    7 VAAEVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIG 318
            V    +IAANKNTVPGDVSA+ P G+R+GTPA+T+RGF  E+F KVAE+ D AV++A+++KA+ +G   K+ + + +  +    ++ +L  +V  +  ++P  G
Sbjct:  388 VLERANIAANKNTVPGDVSALFPSGLRVGTPAMTTRGFGPEEFDKVAEFIDQAVNIAIELKAQEQGKVPKELLASFKKLADESDKVKQLDKEVVSWVSKYPVPG 491

[Close]

BLAST of CD859084 vs. TAIR peptide
Match: AT4G37930.1 (| Symbols: SHM1, STM, SHMT1 | serine transhydroxymethyltransferase 1 | chr4:17831891-17834742 REVERSE LENGTH=517)

HSP 1 Score: 184.496 bits (467), Expect = 1.153e-47
Identity = 90/111 (81.08%), Postives = 103/111 (92.79%), Query Frame = 1

Query:    7 VAAEVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMK 339
            V   VHIA+NKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDF KVAEYFD AV++ALKVK+E++GTKLKDFV A+++SS +QSEI+KL+H+VEEFAKQFPTIGFEK TMK
Sbjct:  404 VLEAVHIASNKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKDFVSAMESSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMK 514

[Close]

BLAST of CD859084 vs. TAIR peptide
Match: AT5G26780.2 (| Symbols: SHM2 | serine hydroxymethyltransferase 2 | chr5:9418299-9421725 FORWARD LENGTH=533)

HSP 1 Score: 174.866 bits (442), Expect = 9.138e-45
Identity = 85/107 (79.44%), Postives = 97/107 (90.65%), Query Frame = 1

Query:   19 VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMK 339
            VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGF+EEDF KVAEYFD AV +ALK+KAES+GTKLKDFV  +Q++  +QSE+SKL+  VEE+AKQFPTIGFEK TM+
Sbjct:  424 VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFIEEDFAKVAEYFDLAVKIALKIKAESQGTKLKDFVATMQSNEKLQSEMSKLREMVEEYAKQFPTIGFEKETMR 530

[Close]

BLAST of CD859084 vs. TAIR peptide
Match: AT5G26780.3 (| Symbols: SHM2 | serine hydroxymethyltransferase 2 | chr5:9418299-9421725 FORWARD LENGTH=533)

HSP 1 Score: 174.866 bits (442), Expect = 9.138e-45
Identity = 85/107 (79.44%), Postives = 97/107 (90.65%), Query Frame = 1

Query:   19 VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMK 339
            VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGF+EEDF KVAEYFD AV +ALK+KAES+GTKLKDFV  +Q++  +QSE+SKL+  VEE+AKQFPTIGFEK TM+
Sbjct:  424 VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFIEEDFAKVAEYFDLAVKIALKIKAESQGTKLKDFVATMQSNEKLQSEMSKLREMVEEYAKQFPTIGFEKETMR 530

[Close]

BLAST of CD859084 vs. TAIR peptide
Match: AT5G26780.1 (| Symbols: SHM2 | serine hydroxymethyltransferase 2 | chr5:9418299-9421725 FORWARD LENGTH=517)

HSP 1 Score: 174.866 bits (442), Expect = 9.138e-45
Identity = 85/107 (79.44%), Postives = 97/107 (90.65%), Query Frame = 1

Query:   19 VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMK 339
            VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGF+EEDF KVAEYFD AV +ALK+KAES+GTKLKDFV  +Q++  +QSE+SKL+  VEE+AKQFPTIGFEK TM+
Sbjct:  408 VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFIEEDFAKVAEYFDLAVKIALKIKAESQGTKLKDFVATMQSNEKLQSEMSKLREMVEEYAKQFPTIGFEKETMR 514

[Close]

BLAST of CD859084 vs. TAIR peptide
Match: AT4G32520.2 (| Symbols: SHM3 | serine hydroxymethyltransferase 3 | chr4:15689642-15692334 REVERSE LENGTH=529)

HSP 1 Score: 89.7373 bits (221), Expect = 3.866e-19
Identity = 43/99 (43.43%), Postives = 66/99 (66.67%), Query Frame = 1

Query:   25 IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSY-VQSEISKLKHDVEEFAKQFPTIG 318
            I  NKN+VPGD SA+VPGGIR+G+PA+T+RG  E+DFV VA++    V + ++ K  + G+KL+DF + + +  + ++  +  LK  VE F  +FP  G
Sbjct:  430 ITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLSEKDFVVVADFIKEGVEITMEAKKAAPGSKLQDFNKFVTSPEFPLKERVKSLKERVETFTSRFPIPG 528

[Close]

BLAST of CD859084 vs. TAIR peptide
Match: AT4G32520.1 (| Symbols: SHM3, AtSHMT3 | serine hydroxymethyltransferase 3 | chr4:15689642-15692334 REVERSE LENGTH=529)

HSP 1 Score: 89.7373 bits (221), Expect = 3.866e-19
Identity = 43/99 (43.43%), Postives = 66/99 (66.67%), Query Frame = 1

Query:   25 IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSY-VQSEISKLKHDVEEFAKQFPTIG 318
            I  NKN+VPGD SA+VPGGIR+G+PA+T+RG  E+DFV VA++    V + ++ K  + G+KL+DF + + +  + ++  +  LK  VE F  +FP  G
Sbjct:  430 ITLNKNSVPGDKSALVPGGIRIGSPAMTTRGLSEKDFVVVADFIKEGVEITMEAKKAAPGSKLQDFNKFVTSPEFPLKERVKSLKERVETFTSRFPIPG 528

[Close]

BLAST of CD859084 vs. TAIR peptide
Match: AT4G13890.1 (| Symbols: SHM5, EDA36, EDA37 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr4:8032146-8033718 REVERSE LENGTH=470)

HSP 1 Score: 85.5001 bits (210), Expect = 7.291e-18
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 1

Query:   22 HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGF 321
            +I  N+N V GD S + PGG+R+GTPA+TSRG VE+DF K+ E+   AV++ L ++ E  G  +KDF + L  +     EI ++K DVEEF   F   GF
Sbjct:  368 YITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITLDIQ-EQYGKVMKDFNKGLVNN----KEIDEIKADVEEFTYDFDMPGF 462

[Close]

BLAST of CD859084 vs. TAIR peptide
Match: AT4G13930.1 (| Symbols: SHM4 | serine hydroxymethyltransferase 4 | chr4:8048013-8050021 REVERSE LENGTH=471)

HSP 1 Score: 83.9593 bits (206), Expect = 2.121e-17
Identity = 45/105 (42.86%), Postives = 67/105 (63.81%), Query Frame = 1

Query:   25 IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMK 339
            I  NKN V GD SA+ PGG+R+G PA+TSRG VE+DF ++ E+   AV+L L ++ ++ G  LKDF + L  +     ++ +LK DVE+F+  +   GF  + MK
Sbjct:  369 ITLNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIGEFLSRAVTLTLDIQ-KTYGKLLKDFNKGLVNN----KDLDQLKADVEKFSASYEMPGFLMSEMK 468

[Close]

BLAST of CD859084 vs. TAIR peptide
Match: AT1G36370.1 (| Symbols: SHM7 | serine hydroxymethyltransferase 7 | chr1:13696240-13698576 REVERSE LENGTH=598)

HSP 1 Score: 68.1662 bits (165), Expect = 1.205e-12
Identity = 36/95 (37.89%), Postives = 59/95 (62.11%), Query Frame = 1

Query:   22 HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQF 306
            HI  NK  + GD   + PGG+R+GTPA+T+RG +E DF  +A++   A  +   ++ E  G   K+FV++L T+     +I++L++ VE FA Q+
Sbjct:  499 HITLNKTAIFGDNGTISPGGVRIGTPAMTTRGCIESDFETMADFLIKAAQITSALQRE-HGKSHKEFVKSLCTN----KDIAELRNRVEAFALQY 588

[Close]

BLAST of CD859084 vs. TAIR peptide
Match: AT1G22020.1 (| Symbols: SHM6 | serine hydroxymethyltransferase 6 | chr1:7754599-7757087 FORWARD LENGTH=599)

HSP 1 Score: 58.5362 bits (140), Expect = 9.544e-10
Identity = 34/101 (33.66%), Postives = 57/101 (56.44%), Query Frame = 1

Query:   22 HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEALQTSSYVQSEISKLKHDVEEFAKQFPTIGFE 324
            HI  NK  +  +   + PGG+R+G+PA+TSRG +E +F  +A++   A  +A   + E  G   K+ ++++    Y   EI+ L++ VE FA QF    F+
Sbjct:  503 HITVNKVAIFSENGVISPGGVRIGSPAMTSRGCLEPEFETMADFLYRAAQIASAAQRE-HGKLQKEPLKSI----YHCKEIADLRNQVEAFATQFAMPAFD 598

The following BLAST results are available for this feature:

BLAST of CD859084 vs. TrEMBL
BLAST of CD859084 vs. SwissProt
BLAST of CD859084 vs. TAIR peptide

BLAST of CD859084 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
A9YWS0_MEDTR	5.257e-50	90.09	Serine hydroxymethyltransferase OS=Medicago trunca...	[more]
D7M9M1_ARALY	1.750e-45	81.98	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
C6ZJZ0_SOYBN	1.750e-45	81.98	Serine hydroxymethyltransferase OS=Glycine max PE=...	[more]
D7T5C1_VITVI	5.092e-45	80.18	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q7Y1F0_ORYSJ	1.134e-44	81.98	Serine hydroxymethyltransferase OS=Oryza sativa su...	[more]
Q10D68_ORYSJ	1.134e-44	81.98	Serine hydroxymethyltransferase OS=Oryza sativa su...	[more]
Q10D67_ORYSJ	1.134e-44	81.98	Serine hydroxymethyltransferase OS=Oryza sativa su...	[more]
B9FBQ3_ORYSJ	1.134e-44	81.98	Serine hydroxymethyltransferase OS=Oryza sativa su...	[more]
B8AJX7_ORYSI	1.134e-44	81.98	Serine hydroxymethyltransferase OS=Oryza sativa su...	[more]
B7E588_ORYSJ	1.134e-44	81.98	Serine hydroxymethyltransferase OS=Oryza sativa su...	[more]

BLAST of CD859084 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
GLYM_PEA	4.213e-54	100.00	Serine hydroxymethyltransferase, mitochondrial OS=...	[more]
GLYM_ARATH	1.451e-46	81.08	Serine hydroxymethyltransferase, mitochondrial OS=...	[more]
GLYM_SOLTU	1.605e-45	79.28	Serine hydroxymethyltransferase, mitochondrial OS=...	[more]
GLYM_FLAPR	1.774e-44	81.08	Serine hydroxymethyltransferase 1, mitochondrial O...	[more]
GLYN_FLAPR	6.742e-44	80.18	Serine hydroxymethyltransferase 2, mitochondrial O...	[more]
GLYM_BOVIN	1.237e-21	50.98	Serine hydroxymethyltransferase, mitochondrial OS=...	[more]
GLYC_CAEEL	6.141e-21	51.49	Serine hydroxymethyltransferase OS=Caenorhabditis ...	[more]
GLYC_CAEBR	6.141e-21	52.53	Serine hydroxymethyltransferase OS=Caenorhabditis ...	[more]
GLYM_HUMAN	1.787e-20	48.54	Serine hydroxymethyltransferase, mitochondrial OS=...	[more]
GLYM_CANAL	2.580e-19	42.31	Serine hydroxymethyltransferase, mitochondrial OS=...	[more]

BLAST of CD859084 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT4G37930.1	1.153e-47	81.08	\| Symbols: SHM1, STM, SHMT1 \| serine transhydroxym...	[more]
AT5G26780.2	9.138e-45	79.44	\| Symbols: SHM2 \| serine hydroxymethyltransferase ...	[more]
AT5G26780.3	9.138e-45	79.44	\| Symbols: SHM2 \| serine hydroxymethyltransferase ...	[more]
AT5G26780.1	9.138e-45	79.44	\| Symbols: SHM2 \| serine hydroxymethyltransferase ...	[more]
AT4G32520.2	3.866e-19	43.43	\| Symbols: SHM3 \| serine hydroxymethyltransferase ...	[more]
AT4G32520.1	3.866e-19	43.43	\| Symbols: SHM3, AtSHMT3 \| serine hydroxymethyltra...	[more]
AT4G13890.1	7.291e-18	45.00	\| Symbols: SHM5, EDA36, EDA37 \| Pyridoxal phosphat...	[more]
AT4G13930.1	2.121e-17	42.86	\| Symbols: SHM4 \| serine hydroxymethyltransferase ...	[more]
AT1G36370.1	1.205e-12	37.89	\| Symbols: SHM7 \| serine hydroxymethyltransferase ...	[more]
AT1G22020.1	9.544e-10	33.66	\| Symbols: SHM6 \| serine hydroxymethyltransferase ...	[more]

InterPro

Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001085	Serine hydroxymethyltransferase	PANTHER	PTHR11680	SERINE HYDROXYMETHYLTRANSFERASE	coord: 3..113 score: 3.3
IPR001085	Serine hydroxymethyltransferase	PFAM	PF00464	SHMT	coord: 3..51 score: 2
IPR015422	Pyridoxal phosphate-dependent transferase, major region, subdomain 2	GENE3D	3.90.1150.10	no description	coord: 5..107 score: 3
IPR015424	Pyridoxal phosphate-dependent transferase, major domain	SUPERFAMILY	53383	PLP-dependent transferases	coord: 6..110 score: 4.1

Properties


Property Name	Value
Singlet in analysis	Pisum sativum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CD859084 ID=CD859084; Name=CD859084; organism=Pisum sativum; type=EST; length=339bp
AGCGTGGTCGCGGCCGAGGTACATATTGCTGCTAATAAAAACACAGTTCC
AGGAGATGTGTCTGCTATGGTTCCTGGTGGCATCAGGATGGGAACTCCTG
CGCTTACTTCAAGGGGATTTGTTGAGGAGGATTTCGTTAAGGTAGCAGAG
TATTTTGATGCAGCTGTGAGTTTGGCCTTGAAGGTTAAGGCAGAAAGCAA
AGGAACAAAATTAAAGGACTTCGTGGAAGCATTGCAGACATCCTCTTACG
TGCAATCAGAGATTTCCAAGCTTAAGCATGATGTTGAGGAGTTTGCAAAA
CAATTTCCAACCATTGGTTTTGAAAAAGCAACCATGAAG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004372	glycine hydroxymethyltransferase activity
GO:0003824	catalytic activity
GO:0030170	pyridoxal phosphate binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006544	glycine metabolic process
GO:0006563	L-serine metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR001085	Ser_HO-MeTrfase
IPR015422	PyrdxlP-dep_Trfase_small
IPR015424	PyrdxlP-dep_Trfase

Search form