CD860264

EST Overview
NameCD860264
Unique NameCD860264
TypeEST
OrganismPisum sativum (pea)
Sequence length410
Libraries
Library NameType
LIBEST_014002 PWcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Homology
BLAST of CD860264 vs. TrEMBL
Match: D7TWZ0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_66.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032579001 PE=4 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.308e-16
Identity = 56/121 (46.28%), Postives = 62/121 (51.24%), Query Frame = 3
Query:    6 ANGMFVENSKVKSYEESSV-PCKTEKEEGELSPNADSEEDNFVAY-DSNLQSIAKXXXXXXXXXXXXXXXXXXXXGEDVSGSESPGDECSRGXXXXXXXXXXXXXXGKAGSEGEAEGMCDA 362
            ANG+  E +K+  Y   SV P K EKEEGELSPN D EEDNFV Y D+N                          GEDVS SES GDECSRG              GKA SEGEA+G+ DA
Sbjct:  930 ANGVLSEGTKLNKYHAESVGPSKIEKEEGELSPNGDFEEDNFVVYGDANADD--------------EDSENVSEAGEDVSASESAGDECSRGEQEEEEDAEHDELDGKAESEGEADGVADA 1036          
BLAST of CD860264 vs. TrEMBL
Match: B9RUH7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0852800 PE=4 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.224e-14
Identity = 58/146 (39.73%), Postives = 66/146 (45.21%), Query Frame = 3
Query:    6 ANGMFVENSKVKSYEESSVPC-KTEKEEGELSPNADSEEDNFVAY-DSNLQSIAK------------------------XXXXXXXXXXXXXXXXXXXXGEDVSGSESPGDECSRGXXXXXXXXXXXXXXGKAGSEGEAEGMCDAQ 365
            ANG  V+ +K   Y E S+   KTEKEEGELSPN D EE+NF AY D+ +QS+ K                                            G+D SGSES GDECSR               GKA SEGEAEGM DAQ
Sbjct:  863 ANGALVDGNKSSRYLEESIELSKTEKEEGELSPNGDFEEENFAAYGDNAMQSMPKGKHSIESRQNETRNREELHSQDAGGENDVDADADDEDSDNASEGGDDASGSESAGDECSREEHEEDDDAERDDVDGKAESEGEAEGMTDAQ 1008          
BLAST of CD860264 vs. TrEMBL
Match: D7M6Q5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_488346 PE=4 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.938e-13
Identity = 55/125 (44.00%), Postives = 62/125 (49.60%), Query Frame = 3
Query:    3 VANGMFVENSKVKS-YEESSVPCKTEKEEGELSPNADSEEDNFVAY-DSNLQSIAKXXXXXXXXXXXXXXXXXXXX------GEDVSGSESPGDECSRGXXXXXXXXXXXXXXGKAGSEGEAEGM 353
            +ANG+  + SK  S Y+ES  P K EKEEGELSP  DSE DNFV Y D  L+  AK                          GED SG+ES GDECS+               GKA SEGEAEGM
Sbjct:  912 LANGVHSDTSKANSNYDESGGPSKIEKEEGELSPVGDSE-DNFVVYEDRGLKDTAKPEHSVEAEGENDEDADDEDGDDASEAGEDASGTESIGDECSQDDNGVEEEGEHDEIDGKAESEGEAEGM 1035          
BLAST of CD860264 vs. TrEMBL
Match: D7LAG6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_477381 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.920e-8
Identity = 47/131 (35.88%), Postives = 61/131 (46.56%), Query Frame = 3
Query:    3 VANGMFVENSK-VKSYEESSVPCKTEKEEGELSPNADSEEDNFVAY-DSNLQSIAK------------XXXXXXXXXXXXXXXXXXXXGEDVSGSESPGDECSRGXXXXXXXXXXXXXXGKAGSEGEAEGM 353
            +ANG+  ++SK  ++ +E     + EKEEGELSPN D  EDNF  Y D  ++S +K                                GED SG+ES G+ECS+               GKA SEGEAEGM
Sbjct:  927 LANGLRSDSSKGTRNSDEPEGSSRIEKEEGELSPNGDF-EDNFGVYEDLGVKSTSKPENSADAEVEADAEMENADDTDDDDGENASEGGEDASGTESGGEECSQDENREEENGEHDEIDGKAESEGEAEGM 1056          
BLAST of CD860264 vs. SwissProt
Match: SNL2_ARATH (Paired amphipathic helix protein Sin3-like 2 OS=Arabidopsis thaliana GN=SNL2 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.641e-14
Identity = 54/125 (43.20%), Postives = 62/125 (49.60%), Query Frame = 3
Query:    3 VANGMFVENSKVKS-YEESSVPCKTEKEEGELSPNADSEEDNFVAY-DSNLQSIAKXXXXXXXXXXXXXXXXXXXX------GEDVSGSESPGDECSRGXXXXXXXXXXXXXXGKAGSEGEAEGM 353
            + NG+  + SK  S Y+ES  P K EKEEGELSP  DSE DNFV Y D  L++ AK                          GED SG+ES GDECS+               GKA SEGEAEGM
Sbjct:  907 LGNGLQSDTSKANSNYDESGGPSKIEKEEGELSPVGDSE-DNFVVYEDRELKATAKTEHSVEAEGENDEDADDEDGDDASEAGEDASGTESIGDECSQDDNGVEEEGEHDEIDGKAESEGEAEGM 1030          
BLAST of CD860264 vs. SwissProt
Match: SNL1_ARATH (Paired amphipathic helix protein Sin3-like 1 OS=Arabidopsis thaliana GN=SNL1 PE=1 SV=2)

HSP 1 Score: 62.7734 bits (151), Expect = 6.454e-10
Identity = 46/127 (36.22%), Postives = 61/127 (48.03%), Query Frame = 3
Query:    3 VANGMFVENSK-VKSYEESSVPCKTEKEEGELSPNADSEEDNFVAY-DSNLQSIAKXXXXXXXXXXXXXXXXXXXXGEDV--------SGSESPGDECSRGXXXXXXXXXXXXXXGKAGSEGEAEGM 353
            +ANG+  ++SK  ++ ++   P + EKEEGELSPN D  EDNF  Y D  ++S +K                     +DV        SG+ES GD CS+               GKA SEGEAEGM
Sbjct:  931 LANGLRSDSSKGTRNSDDPEGPSRNEKEEGELSPNGDF-EDNFGVYKDHGVKSTSKPENSAEAEVEADAEVENEDDADDVDSENASEASGTESGGDVCSQDEDREEENGEHDEIDGKAESEGEAEGM 1056          
BLAST of CD860264 vs. TAIR peptide
Match: AT5G15020.2 (| Symbols: SNL2 | SIN3-like 2 | chr5:4859408-4865569 REVERSE LENGTH=1355)

HSP 1 Score: 76.2554 bits (186), Expect = 6.403e-15
Identity = 54/125 (43.20%), Postives = 62/125 (49.60%), Query Frame = 3
Query:    3 VANGMFVENSKVKS-YEESSVPCKTEKEEGELSPNADSEEDNFVAY-DSNLQSIAKXXXXXXXXXXXXXXXXXXXX------GEDVSGSESPGDECSRGXXXXXXXXXXXXXXGKAGSEGEAEGM 353
            + NG+  + SK  S Y+ES  P K EKEEGELSP  DSE DNFV Y D  L++ AK                          GED SG+ES GDECS+               GKA SEGEAEGM
Sbjct:  907 LGNGLQSDTSKANSNYDESGGPSKIEKEEGELSPVGDSE-DNFVVYEDRELKATAKTEHSVEAEGENDEDADDEDGDDASEAGEDASGTESIGDECSQDDNGVEEEGEHDEIDGKAESEGEAEGM 1030          
BLAST of CD860264 vs. TAIR peptide
Match: AT5G15020.1 (| Symbols: SNL2 | SIN3-like 2 | chr5:4859408-4865569 REVERSE LENGTH=1367)

HSP 1 Score: 76.2554 bits (186), Expect = 6.403e-15
Identity = 54/125 (43.20%), Postives = 62/125 (49.60%), Query Frame = 3
Query:    3 VANGMFVENSKVKS-YEESSVPCKTEKEEGELSPNADSEEDNFVAY-DSNLQSIAKXXXXXXXXXXXXXXXXXXXX------GEDVSGSESPGDECSRGXXXXXXXXXXXXXXGKAGSEGEAEGM 353
            + NG+  + SK  S Y+ES  P K EKEEGELSP  DSE DNFV Y D  L++ AK                          GED SG+ES GDECS+               GKA SEGEAEGM
Sbjct:  907 LGNGLQSDTSKANSNYDESGGPSKIEKEEGELSPVGDSE-DNFVVYEDRELKATAKTEHSVEAEGENDEDADDEDGDDASEAGEDASGTESIGDECSQDDNGVEEEGEHDEIDGKAESEGEAEGM 1030          
BLAST of CD860264 vs. TAIR peptide
Match: AT3G01320.2 (| Symbols: SNL1 | SIN3-like 1 | chr3:106730-113197 FORWARD LENGTH=1360)

HSP 1 Score: 62.7734 bits (151), Expect = 7.326e-11
Identity = 46/127 (36.22%), Postives = 61/127 (48.03%), Query Frame = 3
Query:    3 VANGMFVENSK-VKSYEESSVPCKTEKEEGELSPNADSEEDNFVAY-DSNLQSIAKXXXXXXXXXXXXXXXXXXXXGEDV--------SGSESPGDECSRGXXXXXXXXXXXXXXGKAGSEGEAEGM 353
            +ANG+  ++SK  ++ ++   P + EKEEGELSPN D  EDNF  Y D  ++S +K                     +DV        SG+ES GD CS+               GKA SEGEAEGM
Sbjct:  919 LANGLRSDSSKGTRNSDDPEGPSRNEKEEGELSPNGDF-EDNFGVYKDHGVKSTSKPENSAEAEVEADAEVENEDDADDVDSENASEASGTESGGDVCSQDEDREEENGEHDEIDGKAESEGEAEGM 1044          
BLAST of CD860264 vs. TAIR peptide
Match: AT3G01320.1 (| Symbols: SNL1 | SIN3-like 1 | chr3:106730-113197 FORWARD LENGTH=1372)

HSP 1 Score: 62.7734 bits (151), Expect = 7.326e-11
Identity = 46/127 (36.22%), Postives = 61/127 (48.03%), Query Frame = 3
Query:    3 VANGMFVENSK-VKSYEESSVPCKTEKEEGELSPNADSEEDNFVAY-DSNLQSIAKXXXXXXXXXXXXXXXXXXXXGEDV--------SGSESPGDECSRGXXXXXXXXXXXXXXGKAGSEGEAEGM 353
            +ANG+  ++SK  ++ ++   P + EKEEGELSPN D  EDNF  Y D  ++S +K                     +DV        SG+ES GD CS+               GKA SEGEAEGM
Sbjct:  931 LANGLRSDSSKGTRNSDDPEGPSRNEKEEGELSPNGDF-EDNFGVYKDHGVKSTSKPENSAEAEVEADAEVENEDDADDVDSENASEASGTESGGDVCSQDEDREEENGEHDEIDGKAESEGEAEGM 1056          
The following BLAST results are available for this feature:
BLAST of CD860264 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
D7TWZ0_VITVI1.308e-1646.28Whole genome shotgun sequence of line PN40024, sca... [more]
B9RUH7_RICCO1.224e-1439.73Putative uncharacterized protein OS=Ricinus commun... [more]
D7M6Q5_ARALY3.938e-1344.00Putative uncharacterized protein OS=Arabidopsis ly... [more]
D7LAG6_ARALY2.920e-835.88Putative uncharacterized protein OS=Arabidopsis ly... [more]
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BLAST of CD860264 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
SNL2_ARATH5.641e-1443.20Paired amphipathic helix protein Sin3-like 2 OS=Ar... [more]
SNL1_ARATH6.454e-1036.22Paired amphipathic helix protein Sin3-like 1 OS=Ar... [more]
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BLAST of CD860264 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT5G15020.26.403e-1543.20| Symbols: SNL2 | SIN3-like 2 | chr5:4859408-48655... [more]
AT5G15020.16.403e-1543.20| Symbols: SNL2 | SIN3-like 2 | chr5:4859408-48655... [more]
AT3G01320.27.326e-1136.22| Symbols: SNL1 | SIN3-like 1 | chr3:106730-113197... [more]
AT3G01320.17.326e-1136.22| Symbols: SNL1 | SIN3-like 1 | chr3:106730-113197... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 12..28
score: NAcoord: 59..71
score
NoneNo IPR availableSEGsegsegcoord: 55..74
score: NAcoord: 92..105
score
NoneNo IPR availableSEGsegsegcoord: 60..76
score
NoneNo IPR availableSEGsegsegcoord: 32..45
score: NAcoord: 60..82
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CD860264 ID=CD860264; Name=CD860264; organism=Pisum sativum; type=EST; length=410bp
CAGTGGCCAATGGCATGTTTGTTGAGAACAGTAAAGTTAAAAGCTATGAA
GAATCTTCTGTGCCTTGCAAAACTGAAAAAGAAGAGGGTGAATTATCTCC
AAATGCCGACTCTGAGGAGGATAACTTTGTTGCCTATGATTCAAACCTGC
AGTCAATTGCAAAGGCTGGAGGTGATAATGATGCAGATGCTGATGATGAA
GATAGCGAAAATGTTTCTGAAGCTGGCGAAGATGTGTCGGGAAGTGAATC
TCCTGGTGATGAATGTTCCCGGGGAGATCACGAGGAGGAGGAAGATATGG
AACACGATGATGTTGATGGTAAAGCTGGGAGTGAAGGTGAGGCTGAGGGG
ATGTGTGATGCACAAAAATGGGGGAGATGGCTCATCTTTACCCGTTATCA
GAGAGGTTCC
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