CD860264
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CD860264 vs. TrEMBL
Match: D7TWZ0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_66.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032579001 PE=4 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.308e-16 Identity = 56/121 (46.28%), Postives = 62/121 (51.24%), Query Frame = 3 Query: 6 ANGMFVENSKVKSYEESSV-PCKTEKEEGELSPNADSEEDNFVAY-DSNLQSIAKXXXXXXXXXXXXXXXXXXXXGEDVSGSESPGDECSRGXXXXXXXXXXXXXXGKAGSEGEAEGMCDA 362 ANG+ E +K+ Y SV P K EKEEGELSPN D EEDNFV Y D+N GEDVS SES GDECSRG GKA SEGEA+G+ DA Sbjct: 930 ANGVLSEGTKLNKYHAESVGPSKIEKEEGELSPNGDFEEDNFVVYGDANADD--------------EDSENVSEAGEDVSASESAGDECSRGEQEEEEDAEHDELDGKAESEGEADGVADA 1036
BLAST of CD860264 vs. TrEMBL
Match: B9RUH7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0852800 PE=4 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.224e-14 Identity = 58/146 (39.73%), Postives = 66/146 (45.21%), Query Frame = 3 Query: 6 ANGMFVENSKVKSYEESSVPC-KTEKEEGELSPNADSEEDNFVAY-DSNLQSIAK------------------------XXXXXXXXXXXXXXXXXXXXGEDVSGSESPGDECSRGXXXXXXXXXXXXXXGKAGSEGEAEGMCDAQ 365 ANG V+ +K Y E S+ KTEKEEGELSPN D EE+NF AY D+ +QS+ K G+D SGSES GDECSR GKA SEGEAEGM DAQ Sbjct: 863 ANGALVDGNKSSRYLEESIELSKTEKEEGELSPNGDFEEENFAAYGDNAMQSMPKGKHSIESRQNETRNREELHSQDAGGENDVDADADDEDSDNASEGGDDASGSESAGDECSREEHEEDDDAERDDVDGKAESEGEAEGMTDAQ 1008
BLAST of CD860264 vs. TrEMBL
Match: D7M6Q5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_488346 PE=4 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.938e-13 Identity = 55/125 (44.00%), Postives = 62/125 (49.60%), Query Frame = 3 Query: 3 VANGMFVENSKVKS-YEESSVPCKTEKEEGELSPNADSEEDNFVAY-DSNLQSIAKXXXXXXXXXXXXXXXXXXXX------GEDVSGSESPGDECSRGXXXXXXXXXXXXXXGKAGSEGEAEGM 353 +ANG+ + SK S Y+ES P K EKEEGELSP DSE DNFV Y D L+ AK GED SG+ES GDECS+ GKA SEGEAEGM Sbjct: 912 LANGVHSDTSKANSNYDESGGPSKIEKEEGELSPVGDSE-DNFVVYEDRGLKDTAKPEHSVEAEGENDEDADDEDGDDASEAGEDASGTESIGDECSQDDNGVEEEGEHDEIDGKAESEGEAEGM 1035
BLAST of CD860264 vs. TrEMBL
Match: D7LAG6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_477381 PE=4 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.920e-8 Identity = 47/131 (35.88%), Postives = 61/131 (46.56%), Query Frame = 3 Query: 3 VANGMFVENSK-VKSYEESSVPCKTEKEEGELSPNADSEEDNFVAY-DSNLQSIAK------------XXXXXXXXXXXXXXXXXXXXGEDVSGSESPGDECSRGXXXXXXXXXXXXXXGKAGSEGEAEGM 353 +ANG+ ++SK ++ +E + EKEEGELSPN D EDNF Y D ++S +K GED SG+ES G+ECS+ GKA SEGEAEGM Sbjct: 927 LANGLRSDSSKGTRNSDEPEGSSRIEKEEGELSPNGDF-EDNFGVYEDLGVKSTSKPENSADAEVEADAEMENADDTDDDDGENASEGGEDASGTESGGEECSQDENREEENGEHDEIDGKAESEGEAEGM 1056
BLAST of CD860264 vs. SwissProt
Match: SNL2_ARATH (Paired amphipathic helix protein Sin3-like 2 OS=Arabidopsis thaliana GN=SNL2 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 5.641e-14 Identity = 54/125 (43.20%), Postives = 62/125 (49.60%), Query Frame = 3 Query: 3 VANGMFVENSKVKS-YEESSVPCKTEKEEGELSPNADSEEDNFVAY-DSNLQSIAKXXXXXXXXXXXXXXXXXXXX------GEDVSGSESPGDECSRGXXXXXXXXXXXXXXGKAGSEGEAEGM 353 + NG+ + SK S Y+ES P K EKEEGELSP DSE DNFV Y D L++ AK GED SG+ES GDECS+ GKA SEGEAEGM Sbjct: 907 LGNGLQSDTSKANSNYDESGGPSKIEKEEGELSPVGDSE-DNFVVYEDRELKATAKTEHSVEAEGENDEDADDEDGDDASEAGEDASGTESIGDECSQDDNGVEEEGEHDEIDGKAESEGEAEGM 1030
BLAST of CD860264 vs. SwissProt
Match: SNL1_ARATH (Paired amphipathic helix protein Sin3-like 1 OS=Arabidopsis thaliana GN=SNL1 PE=1 SV=2) HSP 1 Score: 62.7734 bits (151), Expect = 6.454e-10 Identity = 46/127 (36.22%), Postives = 61/127 (48.03%), Query Frame = 3 Query: 3 VANGMFVENSK-VKSYEESSVPCKTEKEEGELSPNADSEEDNFVAY-DSNLQSIAKXXXXXXXXXXXXXXXXXXXXGEDV--------SGSESPGDECSRGXXXXXXXXXXXXXXGKAGSEGEAEGM 353 +ANG+ ++SK ++ ++ P + EKEEGELSPN D EDNF Y D ++S +K +DV SG+ES GD CS+ GKA SEGEAEGM Sbjct: 931 LANGLRSDSSKGTRNSDDPEGPSRNEKEEGELSPNGDF-EDNFGVYKDHGVKSTSKPENSAEAEVEADAEVENEDDADDVDSENASEASGTESGGDVCSQDEDREEENGEHDEIDGKAESEGEAEGM 1056
BLAST of CD860264 vs. TAIR peptide
Match: AT5G15020.2 (| Symbols: SNL2 | SIN3-like 2 | chr5:4859408-4865569 REVERSE LENGTH=1355) HSP 1 Score: 76.2554 bits (186), Expect = 6.403e-15 Identity = 54/125 (43.20%), Postives = 62/125 (49.60%), Query Frame = 3 Query: 3 VANGMFVENSKVKS-YEESSVPCKTEKEEGELSPNADSEEDNFVAY-DSNLQSIAKXXXXXXXXXXXXXXXXXXXX------GEDVSGSESPGDECSRGXXXXXXXXXXXXXXGKAGSEGEAEGM 353 + NG+ + SK S Y+ES P K EKEEGELSP DSE DNFV Y D L++ AK GED SG+ES GDECS+ GKA SEGEAEGM Sbjct: 907 LGNGLQSDTSKANSNYDESGGPSKIEKEEGELSPVGDSE-DNFVVYEDRELKATAKTEHSVEAEGENDEDADDEDGDDASEAGEDASGTESIGDECSQDDNGVEEEGEHDEIDGKAESEGEAEGM 1030
BLAST of CD860264 vs. TAIR peptide
Match: AT5G15020.1 (| Symbols: SNL2 | SIN3-like 2 | chr5:4859408-4865569 REVERSE LENGTH=1367) HSP 1 Score: 76.2554 bits (186), Expect = 6.403e-15 Identity = 54/125 (43.20%), Postives = 62/125 (49.60%), Query Frame = 3 Query: 3 VANGMFVENSKVKS-YEESSVPCKTEKEEGELSPNADSEEDNFVAY-DSNLQSIAKXXXXXXXXXXXXXXXXXXXX------GEDVSGSESPGDECSRGXXXXXXXXXXXXXXGKAGSEGEAEGM 353 + NG+ + SK S Y+ES P K EKEEGELSP DSE DNFV Y D L++ AK GED SG+ES GDECS+ GKA SEGEAEGM Sbjct: 907 LGNGLQSDTSKANSNYDESGGPSKIEKEEGELSPVGDSE-DNFVVYEDRELKATAKTEHSVEAEGENDEDADDEDGDDASEAGEDASGTESIGDECSQDDNGVEEEGEHDEIDGKAESEGEAEGM 1030
BLAST of CD860264 vs. TAIR peptide
Match: AT3G01320.2 (| Symbols: SNL1 | SIN3-like 1 | chr3:106730-113197 FORWARD LENGTH=1360) HSP 1 Score: 62.7734 bits (151), Expect = 7.326e-11 Identity = 46/127 (36.22%), Postives = 61/127 (48.03%), Query Frame = 3 Query: 3 VANGMFVENSK-VKSYEESSVPCKTEKEEGELSPNADSEEDNFVAY-DSNLQSIAKXXXXXXXXXXXXXXXXXXXXGEDV--------SGSESPGDECSRGXXXXXXXXXXXXXXGKAGSEGEAEGM 353 +ANG+ ++SK ++ ++ P + EKEEGELSPN D EDNF Y D ++S +K +DV SG+ES GD CS+ GKA SEGEAEGM Sbjct: 919 LANGLRSDSSKGTRNSDDPEGPSRNEKEEGELSPNGDF-EDNFGVYKDHGVKSTSKPENSAEAEVEADAEVENEDDADDVDSENASEASGTESGGDVCSQDEDREEENGEHDEIDGKAESEGEAEGM 1044
BLAST of CD860264 vs. TAIR peptide
Match: AT3G01320.1 (| Symbols: SNL1 | SIN3-like 1 | chr3:106730-113197 FORWARD LENGTH=1372) HSP 1 Score: 62.7734 bits (151), Expect = 7.326e-11 Identity = 46/127 (36.22%), Postives = 61/127 (48.03%), Query Frame = 3 Query: 3 VANGMFVENSK-VKSYEESSVPCKTEKEEGELSPNADSEEDNFVAY-DSNLQSIAKXXXXXXXXXXXXXXXXXXXXGEDV--------SGSESPGDECSRGXXXXXXXXXXXXXXGKAGSEGEAEGM 353 +ANG+ ++SK ++ ++ P + EKEEGELSPN D EDNF Y D ++S +K +DV SG+ES GD CS+ GKA SEGEAEGM Sbjct: 931 LANGLRSDSSKGTRNSDDPEGPSRNEKEEGELSPNGDF-EDNFGVYKDHGVKSTSKPENSAEAEVEADAEVENEDDADDVDSENASEASGTESGGDVCSQDEDREEENGEHDEIDGKAESEGEAEGM 1056 The following BLAST results are available for this feature:
BLAST of CD860264 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 4
BLAST of CD860264 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 2
BLAST of CD860264 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CD860264 ID=CD860264; Name=CD860264; organism=Pisum sativum; type=EST; length=410bpback to top |